Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq26 170 1e-36 seq42 152 4e-31 seq27 150 1e-30 seq1 138 9e-27 >seq26 Length=465297 Score = 170 bits (188), Expect = 1e-36 Identities = 945/1496 (63%), Gaps = 22/1496 (1%) Strand=Plus/Minus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 || || || || || || ||||| ||| || | || || ||| | || || ||| Sbjct 297972 TTGGTGATGGTGATCTTGTTGGACTTGCCCGTCGTCTTGTCCAGGGCTGAGACGTTGAGA 297913 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || || |||||||| | |||||| ||||||||||| || || || || | |||| || Sbjct 297912 ATGCCGTTGGCATCGACATCAAAGGTGACTTCAATCTGTGGAACGCCACGGGGAGCTGGG 297853 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| ||| ||| | ||| | ||||| || || || || || | |||| ||| Sbjct 297852 GGGATGCCTGCCAGCTCAAACTTGCCCAGCAGGTTGTTGTCCTTGGTTTGTGTTCGCTCA 297793 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 || ||||| | |||||| || ||| |||||| || | ||| || | || || Sbjct 297792 CCTTCGAACACTTGGATGAGCACACCAGGTTGATTGTCAGCATAGGTCGAGAACACCTCC 297733 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 || || || || | || ||||| | | || | | |||||| | || || || Sbjct 297732 GACTTCTTGGTGGGCACCGTCGTGTTCCGCTTGATCAAAGGGGTCATGACCCCCCCGGCC 297673 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACAT----CAACTAGGACAATATTTTGAAGTTT 517569 ||||| | ||||| || || || ||||||| |||| ||||| | | | ||| Sbjct 297672 GTTTCGATACCAAAGGAGAGGGGGGTGACATCCAGCAAC-AGGAC-CGAGTCGG--TTTT 297617 Query 517570 TTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 517629 |||| || | || ||||| || ||||||| || || ||||| || || ||||| Sbjct 297616 TTCAGATGTGTCGCCTGTGAGAATGGCAGCTTGAACGGCTGCGCCATAGGCCACGGCTTC 297557 Query 517630 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 517689 |||||||| | | | || ||| || |||| |||||| | || | | | | Sbjct 297556 GTCAGGATTGATGGACTTGCTTGGTTGCTTGCCATGGAAAAAGTCGGACACCATCTTTTG 297497 Query 517690 TACCTTAGGAATACGAGATGAT-CCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 517748 | ||| || ||||| | || | || || || | ||||| || |||||||| || | Sbjct 297496 GATCTTGGGGATACG-GGTGCTGCCACCGACAAGCACAATGTCGTGCACCTGGCCCTTGT 297438 Query 517749 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTG 517808 ||| || | || | || ||||| ||||| || | | | || | ||| Sbjct 297437 CCATCTTGGCGTCGCGCAGCACCTTTTCGACGGGATCCATGGTCTTACGGAATAGATCTT 297378 Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACA 517868 |||||||| || || | || | || | || || ||||| ||||| || | Sbjct 297377 GGTTGAGTTCTTCAAAGCGGGCACGGGTCAAAGAGGTATAGTAGTCAATGCCTTCAAAAA 297318 Query 517869 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 517928 || || | || | || || |||| || || || || || || || || ||||| | Sbjct 297317 GCGAGTCGATCTCGACGGTGGTCTGAGCAGAGGATGAGAGCGCGCGCTTGGCTCGTTCGC 297258 Query 517929 ATGCTGTCCTTAGTCTTCGTAAGG--CTTTTGCTGATTGATTCAAATCTGTTTTATATTT 517986 | ||||| | || | || | || | | || | | | | ||| |||| | || Sbjct 297257 AGGCTGTTCGCAGGCGGCGGATGGACCGAGGGTTGGT--AGTGAGGTCTTTTTTGTGCTT 297200 Query 517987 TCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAA 518046 | |||||| |||| ||| | | || || || || ||||| ||||| || || | Sbjct 297199 GCGCTTGAACTCTTGTACAAAGTGGGAAACCAGGCGGTTGTCAAAGTCTTCGCCGCCAAG 297140 Query 518047 TTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGT 518106 | || | || | || || | |||| || | || || || | |||| || | Sbjct 297139 ATGGGTGTCGCCCGCTGTCGCCTTGACTTCAAAGACGCCGTCGTCGATCGACAGCAGCGA 297080 Query 518107 TACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT 518166 |||||| || ||||| || | |||||| || || || || || ||| | Sbjct 297079 CACATCAAACGTGCCACCCCCTAGATCAAAGATCAGAACGTTGCGCTCCCCCTCTGCCTG 297020 Query 518167 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 518226 || || || ||||| |||| ||| || ||||| || || || ||||| | | || || Sbjct 297019 CTTGTCCAGGCCATAGGCAATAGCGGCGGCAGTGGGCTCGTTGATAATACGTAGGACGTT 296960 Query 518227 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 518286 || |||||||| | || ||||| || || ||||| | || || ||||| || ||||| Sbjct 296959 GAGGCCAGCAATCATACCGGCATCCTTGGTAGCTTGACGCTGCGAGTCGTTGAAGTATGC 296900 Query 518287 AGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTT 518346 ||| |||||||| || || || | || ||| | || || || |||| || Sbjct 296899 AGGCACAGTAATGACTGCGTCCTTGACAGTGCCACCCAGGTAGGCTTCGGCAGTTTCCTT 296840 Query 518347 CATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCA-TTTT 518405 ||| || | | | ||| || || || | ||| || | | ||||||| |||| ||| Sbjct 296839 CATCTTGGTCAGCACCATGGAGGAGATCTCTTCGGGAGTGAACTGCTTGGTTTCACCTTT 296780 Query 518406 GATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATT 518465 || || |||| | | || || | || | || || || | ||||| | Sbjct 296779 GA-ATTCGACTTGGATCTCGGGCTTGGTGTTGTTATCCACTACCTTGAAGGACCAGTGCT 296721 Query 518466 TCATATCTGATTGAACACTTTGGTCAT--TAAAATC-TCTACCAATTAATCGTTTTGCAT 518522 |||| || ||| ||||| || ||| | |||| | || || | || || |||| Sbjct 296720 TCATGTCATCTTG--CACTTCGG-CATCCTGGAATCGCCGTCCGATCAGGCGCTTGGCAT 296664 Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 || | | || ||| || | ||| ||||| | ||||| ||||| || |||| Sbjct 296663 CATACACCGTGTTGCCCACGTTCAATGCTGCTTGGTTCTTGGCCGCATCACCGATCAAGC 296604 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 |||| | || || || | ||| | ||||| ||||| || || ||||| ||||| |||| Sbjct 296603 GTTCCGAGTCGGTGAAGGCTACAAACGATGGTGTTGTTCGGTTGCCTTGGTCATTGGCAA 296544 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAA 518698 | | ||| || | |||||||| || | ||||| | | ||||| |||||| Sbjct 296543 TCACTTCGACGCGGTCGTTTTGCCACACGGCCACACAGGAATAGGTTGTACCTAAA 296488 >seq42 Length=317922 Score = 152 bits (168), Expect = 4e-31 Identities = 249/358 (70%), Gaps = 3/358 (1%) Strand=Plus/Plus Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 |||| ||||||||||| ||||| | |||| || | || || |||| || | | Sbjct 189087 TATCGAAATCTTCACCACCCAAGTGGGTATCACCAGCAGTGGCCAACACTTCAAAGATAC 189146 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 | || |||| ||||| |||| |||||| || |||||||||| ||| ||| || | Sbjct 189147 CGTCATCAATGGACAACAGAGACACATCAAAAGTACCACCACCCAAGTCATAAACGAGGA 189206 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 || || |||| | | | ||| || || | |||||| |||| ||||||||||| |||| Sbjct 189207 CAGTCTTTTC---GCCATCGTTCTTGTCCAAACCATAAGCAATGGCAGCAGCAGTGGGTT 189263 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 | || || || | ||| | || | ||||||||| | || ||||| || || ||||| | Sbjct 189264 CGTTGATGATACGCAAGATGTTCAAACCAGCAATGGTACCGGCATCCTTGGTAGCTTGAC 189323 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 ||| | |||||| || || ||||| || || | ||| |||| || ||||| || || | Sbjct 189324 GTTGAGCATCGTTGAAGTAAGCAGGCACGGTCACAACAGCATGGGTCACTTCCTTGCCCA 189383 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 ||| || || |||| ||||| || | || ||||| || |||| ||| || Sbjct 189384 AATAGGCTTCGGCAGTTTCCTTCATCTTGGTCAAGATCATACCAGAGATTTCTTCGGG 189441 >seq27 Length=1513655 Score = 150 bits (166), Expect = 1e-30 Identities = 307/454 (68%), Gaps = 4/454 (1%) Strand=Plus/Plus Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912 |||| ||||||||||| || || | |||||| | ||||||| |||||||| | | | Sbjct 18463 TCAACACCTTCGAACAAGGAGTCGATTTCAATGGAGGTTTGAGCAGAAGAAGACAAGGTA 18522 Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA 517972 || |||||||||||||| || || | || | || | ||| | | ||| | | Sbjct 18523 CGCTTAGCACGTTCACAAGCAGTGCGGAGACGGCGGAGGGCACGAG--GGTTGCCAGAGA 18580 Query 517973 TCTGTTT--TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030 | | || | || || | |||||| |||| | | | || ||||| ||||| | Sbjct 18581 TGTCCTTCTTGTACTTGCGCTTGAATTCTTGCATGAAGTGAGAGACGAGACGGTTATCGA 18640 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 |||||||||| ||||| | ||| | || | || || | |||| || | ||||||| Sbjct 18641 AATCTTCACCACCCAAGTGAGTGTCACCAGCAGTGGCCTTGACTTCAAAGATACCATCTT 18700 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 | | | ||| | | |||||| ||| || ||||||| ||| || || || || || Sbjct 18701 CGATGGTCAACAAGGACACATCAAAGGTACCGCCACCCAAATCGAAGATGAGGACGTTGC 18760 Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210 ||| || || || || | |||||| |||| ||||| ||||| ||||| || | Sbjct 18761 GTTCACCTTCGGTCTTCTTGTCCAAACCATAAGCAATGGCAGCGGCAGTGGGTTCGTTGA 18820 Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270 | || | ||| || || | ||| ||||| || | ||| || |||||||| | ||| | Sbjct 18821 TGATACGCAAGACGTTCAAACCGGCAATCAAACCAGAATCCTTGGTGGCTTGACGTTGGG 18880 Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 | ||||| || || ||||||||||| || || || Sbjct 18881 AGTCGTTGAAGTAAGCAGGAACAGTGATGACAGC 18914 Score = 147 bits (162), Expect = 2e-29 Identities = 293/428 (68%), Gaps = 6/428 (1%) Strand=Plus/Plus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 || || || || || || ||||| ||| || | || ||| |||| |||||| | | Sbjct 17761 TTGGTGATGGTGATCTTGTTGGACTTGCCGGTGGTCTTGTCAAGAGCAGACACATTCAAA 17820 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| |||||||| | |||||| |||||||| |||||||| || || | ||||||| Sbjct 17821 ATACCGTTGGCATCGACATCAAAGGTGACTTCGATTTGAGGCACACCACGGGGAGCAGGG 17880 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || ||| | || | || || | || || || || ||| |||||| Sbjct 17881 GGGATACCGGACAATTCGAACTTGCCGAGGATGTTGTTGTCCTTGGTGCGGGCACGTTCA 17940 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 || ||||| | |||||| || | | ||| || || | ||| || | || | | Sbjct 17941 CCTTCGAAGACTTGGATCAACACACCGGGTTGGTTGTCGGCATAGGTGGAGAAGATTTCA 18000 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 || || || ||| | || ||||| | | || | | ||||| | |||||| || Sbjct 18001 GACTTCTTGGTAGGGACGGTAGTGTTACGCTTGATCAAAGCAGTCATCACACCACCAGCA 18060 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATC-AACTAGGACAATATTTTGAAGT-TTTT 517571 ||||| | ||| | ||| | ||||| |||||| ||| | ||| | | || |||| Sbjct 18061 GTTTCGATACCCAAAGACAAAGGAGCGACATCCAACAACAACAGGGAGTCG--GTCTTTT 18118 Query 517572 CATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 || || | |||| |||||| |||| ||||| | |||||||||||| |||||||||||| Sbjct 18119 CAGAGGTGTCACCAGACAAGA-TAGCAGCTTGGACAGCAGCACCATAGGCAACAGCTTCA 18177 Query 517631 TCAGGATT 517638 ||||| || Sbjct 18178 TCAGGGTT 18185 Score = 113 bits (124), Expect = 3e-19 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 518549 GCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATAT 518608 |||||||| | ||||| ||||| || |||| | |||| || || || || | |||||| Sbjct 19293 GCAGCTTGGTTCTTGGCAGCATCACCGATCAAACGTTCGGTATCGGTGAAAGCAACATAA 19352 Query 518609 GATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCAT 518668 || ||||| ||||| ||||||||||| || ||||| |||||||| | | |||||||| Sbjct 19353 GAGGGAGTGGTGCGGTTACCTTGATCGTTGGCAATGATTTCAACACGATCGTTTTGCCAC 19412 Query 518669 ACACCTACACAA 518680 ||||| |||||| Sbjct 19413 ACACCAACACAA 19424 >seq1 Length=1790259 Score = 138 bits (152), Expect = 9e-27 Identities = 196/274 (72%), Gaps = 4/274 (1%) Strand=Plus/Minus Query 518034 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAA 518093 |||| || ||||| | ||| | || | ||| || | |||| || | || ||||||| Sbjct 762531 CTTCGCCACCCAAGTGAGTGTCACCAGCCGTGGCCTTGACTTCAAAGATGCCTTCTTCAA 762472 Query 518094 GAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT 518153 | ||| |||| ||||||| ||| || ||||||| |||||| ||||| ||||| || Sbjct 762471 TTGTCAACAGAGATACATCAAAGGTACCGCCACCCAGATCAAAGATAAGGACATTGTGTT 762412 Query 518154 CTTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 518211 | | ||| || || || | ||||| |||| |||||||| || ||||| || || Sbjct 762411 CACCTT--TGGAATTCTTGTCCAAGCCATAAGCAATGGCAGCAGCGGTAGGTTCGTTGAT 762354 Query 518212 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 518271 ||| | || || || ||||| ||||| || || || || || ||||| | ||| || Sbjct 762353 AATACGCAGCACGTTCAGACCTGCAATGGCACCAGCGTCCTTGGTAGCTTGACGTTGAGA 762294 Query 518272 ATCGTTAAAATATGCAGGAACAGTAATAACGGCA 518305 ||||||||| || ||||| |||||||| || ||| Sbjct 762293 ATCGTTAAAGTAAGCAGGCACAGTAATGACAGCA 762260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780816742944484