Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq38 158 2e-33 seq56 107 2e-18 >seq38 Length=1275103 Score = 158 bits (174), Expect = 2e-33 Identities = 866/1372 (63%), Gaps = 30/1372 (2%) Strand=Plus/Minus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 || || ||||||| || || |||| || || || || || || ||| ||| |||||| | Sbjct 989527 ACTTGATCATGCGTGTGGCCGTCGGGATTCACGGCGACGACATCGATGCTGCTTTGGAAA 989468 Query 111679 CATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTG 111738 | ||| | ||||||| | | |||| ||| || | || || ||||||||||| | Sbjct 989467 CCTACCAATTGATGTCCGAGCGCTTCTTCACCCATGCCAGCCCTACGCTCTTCAACGCCG 989408 Query 111739 GTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCA 111798 | || || | || ||||||||| || ||||| | | | ||||| || || ||| Sbjct 989407 GCACGCCTCGTCCTCAAATGTCCTCGTGCTTCCTCTTGACCATGAAGGAAGACTCGATCG 989348 Query 111799 ATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCG 111858 | ||||| |||| || |||| |||||||||||||| ||| ||||| || || | Sbjct 989347 AAGGCATCTACGAAACCCTCAAGTCTTGTGCCCAAATCTCCAAGACCGCTGGCGGCATTG 989288 Query 111859 GGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAAT 111918 | | ||||||| | || | |||| ||| ||| || || || || | | Sbjct 989287 GTCTCAACATCCACAACATCCGTGCCACTGGCTCTTACATTGCTGGCACCAACGGCTACT 989228 Query 111919 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAG 111978 | | ||| | | || ||||| || || || ||| ||| || ||||| || | |||| Sbjct 989227 CCAACGGTCTCCTGCCCATGCTCCGAGTCTTCAACAACACTGCCCGCTACGTCGATCAAG 989168 Query 111979 CTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATA 112032 ||| ||||| | || || | || | || || || || |||||||| ||| Sbjct 989167 GTGGCAACAAGCGTCCC---GGTGCTTTTGCCATGTACCTGGAACCTTGGCACGCCGATG 989111 Query 112033 TCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATC 112092 || | || | || | || ||| || | || || || ||| |||| Sbjct 989110 TCTTCACCTTTTTGGACCTTCGCAAGAACGTCGGCAAGGACGAAATCCGTGCCCGTGATC 989051 Query 112093 TCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATT 112152 | |||| || || ||| | || ||||||||||||||| | || || | | ||| | | Sbjct 989050 TGTTCTATGCGCTGTGGGTGCCTGATCTCTTCATGAAGCGTGTGGAAGCCAACGGCGAGT 988991 Query 112153 GGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTG 112212 |||| || || ||||| || | || || ||||| ||| | ||| || || || | Sbjct 988990 GGTCGCTGTTCTGTCCCAACGAAGCCCCTGGTCTGCACGAAGTATGGGGCGATGAATTCG 988931 Query 112213 AAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCG 112272 ||| || || | ||||| ||||| | || || | | | | | || | Sbjct 988930 AAGAGCTGTATGCCCGCTACGAACAAGAAGGCCGTGC-TCGCCAAACGATCAAGGCCCAA 988872 Query 112273 ATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTAC 112331 | | ||||| | || || | | | |||||||| || || | || | |||||| || Sbjct 988871 AAGCTGTGGTACGCCATCATGGAAGCCCAAACCGAAACCGGCAACCCCTTTATGCTGTAT 988812 Query 112332 AAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAAC 112391 ||||| ||||| |||| || || ||| | || | || |||||| | ||| Sbjct 988811 AAAGATGCCTGCAACCGCAAATCCAACCAACAAAACCTCGGCACCATCAAGTGCAGTAAC 988752 Query 112392 CTCTGTACAGAAATCTTGGAAT-TTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 112450 || ||||| ||||| | || | | ||| | ||||| | || ||||| ||||| || Sbjct 988751 CTGTGTACCGAAATTGTCGAGTACTCCAG-CCCTGATGAAATCGCCGTGTGCAACCTGGC 988693 Query 112451 ATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACT 112510 |||||||| ||| ||||| | || | | | | ||||| | | | || || Sbjct 988692 CAGTATCGCTCTTCCCTCCTATGTCG-TCAACCG--CACCTCTTTTGACTTTAAGAAGCT 988636 Query 112511 CCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTA 112570 || | || || || | || ||||| |||| | || || | || | || Sbjct 988635 GCATGCCGTCACCAAGGTCATTACCCGCAACCTGAACAAGATCATCGACATCAACTACTA 988576 Query 112571 CCC---CGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGT 112627 ||| | | ||| | | || || || | | | ||||| || |||||||||||||| Sbjct 988575 CCCTGTCATCGAGGCCGAACG---CTCCAACAAGCGTCACCGCCCCATTGGTCTCGGTGT 988519 Query 112628 CCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAA 112687 ||||||||| || |||| || || || ||| | | ||||| || |||||||| || Sbjct 988518 CCAAGGTCTGGCCGATGCCTTTATGCTGATGCGCTATCCCTTTGAATCAGACGAAGCCAA 988459 Query 112688 GGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGA 112747 | | || | || ||||| || || || |||||||| | || | ||| Sbjct 988458 GCTGTTGAACCGTCAAATCTTTGAAACTATTTACCACGCCGCCATGGAAACCTCAATGGA 988399 Query 112748 GTTGGC---AGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804 | |||| ||| | ||||| || ||||||| || || || | || |||| Sbjct 988398 GCTGGCCCGTGAGCT---CGGTCCTTACGAAACCTACGAAGGAAGCCCTGTGTCCAAAGG 988342 Query 112805 GGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGACGCTC 112863 | | || | || ||||||| | || | || | | | || ||||||| ||| | Sbjct 988341 TATCTTCCAGTACGACATGTGGG-ATGTCACTCCTACCGACCTCTGGGACTGGGCCGCCC 988283 Query 112864 TCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 112923 ||||||||| ||| || | || | || ||| || || | || || ||||| | Sbjct 988282 TCAAGGAACAAGTCAGCAAGCACGGCGTGCGCAACTCGCTCCTGGTCGCCCCCATGCCTA 988223 Query 112924 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975 | ||||| ||| ||||||| | || || |||||||| || |||||||| Sbjct 988222 CCGCCTCTACCTCACAAATGCTCGGCTTCAACGAATGCTTCGAGCCCTACAC 988171 >seq56 Length=149020 Score = 107 bits (118), Expect = 2e-18 Identities = 261/390 (67%), Gaps = 4/390 (1%) Strand=Plus/Minus Query 13597 TCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGG 13656 |||| ||||||||| | || || ||| |||||||| ||| | || ||||| || Sbjct 79085 TCTACCAAGCCTCTACCTCTGAATTGTACGGTAAGGTGGTGGAAACTCCTCAAAAGGAAA 79026 Query 13657 AGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATTGGCTC 13715 || ||||||||||| || || ||| || || | ||| | | ||| | ||| || Sbjct 79025 CCACTCCCTTCTACCCTCGTTCTCCCTATGGTGTGGCCAAGCTGTACGGTT-ACTGGATC 78967 Query 13716 GTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAACCAT 13775 || || ||||| || || ||| ||||||| || ||| || || |||||||| Sbjct 78966 GTTGTCAACTACCGTGAATCCTACAACATGTTTGCCTGTAACGGTATTCTGTTCAACCAC 78907 Query 13776 GAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTACCGAGGGTATCAAACAA 13835 ||||| || | || || |||||| ||| ||||| ||| | || | Sbjct 78906 GAATCTCCCCGCCGTGGCCGTACCTTTGTCACCCGCAAGATCACCCGTGCCGTCGCTGAC 78847 Query 13836 ATC-ATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAGATTG 13894 ||| || || | ||| | | | | | ||||||||||| | || || | ||||| Sbjct 78846 ATCCATTTGGGCCGTCAAGAA-TGCTTGTACTTGGGTAACATCGATGCCAAGCGTGATTG 78788 Query 13895 GGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCGA 13954 |||||| || |||||||| |||| ||||||| | ||| | |||||||| |||||||| Sbjct 78787 GGGTCATGCCCGTGACTATGTCGAAGGTATGTGGTTGATGTTGCAACAAGAAGAAGCCGA 78728 Query 13955 CGAATATGTAGTAGCAACGGGTGAGACCCA 13984 || | ||| | || || ||||| ||||| Sbjct 78727 TGACTTTGTCTTGGCCACCGGTGAAACCCA 78698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741515442080