Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq38 194 2e-44 seq25 116 4e-21 >seq38 Length=1275103 Score = 194 bits (214), Expect = 2e-44 Identities = 1095/1738 (63%), Gaps = 28/1738 (2%) Strand=Plus/Plus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || ||||| ||||||||||| || ||||| |||||| |||| | ||||| || | Sbjct 987814 CGCAGATAGTACATACCCGTCTTCAGACCCTTCTTCCAGCCGTAAAAGTGCATGGAGGTC 987873 Query 109468 AGTTTGG-AAAGTGTCGGACTCTCCATAAACAAGTTCATCGACT--GAGACTGATCGATG 109524 || ||| ||||| | || | | || |||| ||| | |||| | || |||||||| Sbjct 987874 AGCTTGCCAAAGTTAGGCACGC-CAATGAACACGTTGA--GACTTTGGGATTGATCGATA 987930 Query 109525 AATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTC 109584 || |||||| || || ||||| ||||||| |||| |||||||| || ||| Sbjct 987931 AAGGCACCACGGTCGGCAGCCATATCGATGAGGGTGCGTTGGGAGATTTCCCACACGGTC 987990 Query 109585 TTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCC 109644 ||||| | |||| | |||||| |||| ||||| || | |||||| | Sbjct 987991 TTGTAGATGGCTTTGAGGTTATCGGGGATGTTGGGGATGTGCTGGACAGAGCCGTTGTCG 988050 Query 109645 TTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACA 109704 || ||| | | ||| || || | ||||| || | || || || | | Sbjct 988051 GACATGATGCGGTTCTTGATTTCATCATTCCAGATGCCAAGCTCCACCAGGTCCTTGAGC 988110 Query 109705 AGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTC 109764 || |||| | || |||||||| ||||| || ||| ||| | || | Sbjct 988111 AGCCAGGGGTTGGCGACTTGGAATTCACCGGCAAGGACCCGGCGGGTGTAAAGATTGGAT 988170 Query 109765 GTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATG 109824 |||||||| ||||| || || ||| ||| || ||||||| || || || || |||||| Sbjct 988171 GTGTAGGGCTCGAAGCATTCGTTGAAGCCGAGCATTTGTGAGGTAGAGGCGGTAGGCATG 988230 Query 109825 GGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCC 109884 || || | || || ||| || | || | | | | || | || | ||| || Sbjct 988231 GGGGCGACCAGGAGCGAGTTGCGCACGCCGTGCTTGCTGACTTGTTCCTTGAGGGCGGCC 988290 Query 109885 CAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATC-TGGTTGAAGTACACC 109943 || || | | | || ||| || |||||||| || | | |||| | ||| Sbjct 988291 CAGTCCCAGAGGTCGGTAGG---AGTGACA---TCCCACATGTCGTACTGGAAG-ATACC 988343 Query 109944 CTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTC---GGCCAACTC 110000 | | |||| || | | | | ||||| | || | ||| ||||| ||| Sbjct 988344 TTTGGACACAGGGCTTCCTTCGTAGGTTTCGTAAGGACCG---AGCTCACGGGCCAGCTC 988400 Query 110001 GGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCG 110060 ||| | || | || || || || ||||| ||||| || ||| |||| || Sbjct 988401 CATTGAGGTTTCCATGGCGGCGTGGTAAATAGTTTCAAAGATTTGACGGTTCAACAGCTT 988460 Query 110061 AGACTCTTCACAGTCGAAGGGAAGACCACAA-AGAATAAACACATCCGCTAGACCCTGAA 110119 | || || | || |||||| | | || || ||||| |||| || ||||| || | Sbjct 988461 GGCTTCGTCTGATTCAAAGGGAT-AGCGCATCAGCATAAAGGCATCGGCCAGACCTTGGA 988519 Query 110120 CACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAA 110179 ||||||||||||||||||| || | |||| |||||| || || ||||| Sbjct 988520 CACCGAGACCAATGGGGCGGTGACGCTTGTTGGAGCGTTCGGCCTCGATGACAGGGTAGT 988579 Query 110180 AGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTT 110239 ||||| |||||||| | || || || || | ||| |||| |||| || | Sbjct 988580 AGTTGATGTCGATGATCTTGTTCAGGTTGCGGGTAATGACCTTGGTGACGGCATGCAGCT 988639 Query 110240 TGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAA 110299 | | | || || | || || |||||| ||| ||||| ||| || | Sbjct 988640 TCTTAAAGTCAAAAGAG---GTGCGGTTGACGACATAGGAGGGAAGAGCGATACTGGCCA 988696 Query 110300 GATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGG 110359 | |||||||| | | || || | || ||| || | |||||| ||||||| ||| Sbjct 988697 GGTTGCACACGGCGATTTCATCAGGGCTGGAGTACTCGACAATTTCGGTACACAGGTTAC 988756 Query 110360 AACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGA 110419 | ||| ||| || | ||| | || || |||||| |||||| ||||| ||||| | Sbjct 988757 TGCACTTGATGGTGCCGAGGTTTTGTTGGTTGGATTTGCGGTTGCAGGCATCTTTATACA 988816 Query 110420 GCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGG 110479 |||| | ||| | || ||||| || || | | | ||||| | ||| | | || Sbjct 988817 GCATAAAGGGGTTGCCGGTTTCGGTTTGGGCTTCCATGATGGCGTACCACAGCTTTTGGG 988876 Query 110480 CGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATT 110539 | || ||| | ||| | ||||| | ||||| || |||| || || |||| Sbjct 988877 CCTTGATCGTTTGGCGAGCACGGCCTTCTTGTTCGTAGCGGGCATACAGCTCTTCGAATT 988936 Query 110540 CCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTC 110599 | | || | || || ||||| || | || ||||||||| || ||||| | | Sbjct 988937 CATCGCCCCATACTTCGTGCAGACCAGGGGCTTCGTTGGGACAGAACAGCGACCACTCGC 988996 Query 110600 CACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC 110659 | | || || | ||||||||| || ||||| | ||||| ||| |||| || |||| Sbjct 988997 CGTTGGCTTCCACACGCTTCATGAAGAGATCAGGCACCCACAGCGCATAGAACAGATCAC 989056 Query 110660 GGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCG 110719 || ||| || || | || ||| ||| || ||||||||| | || ||| | Sbjct 989057 GGGCACGGATTTCGTCCTTGCCGACGTTCTTGCGAAGGTCCAAAAAGGTGAAGACATCGG 989116 Query 110720 AGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGAC--CCGCCTGGTTA-A 110776 |||||| ||||| || || | || | | || ||| || ||| | | | Sbjct 989117 CGTGCCAAGGTTCCAGGTACATGGCAAAAGCACCGGGACGCTTGTTGCCACCTTGATCGA 989176 Query 110777 CATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCAT 110836 | ||||| || ||| |||||||| | |||||| || | | || | ||| | || | Sbjct 989177 CGTAGCGGGCAGTGTTGTTGAAGACTCGGAGCATGGGCAGGAGACCGTTGGAGTAGCCGT 989236 Query 110837 TTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCAC 110896 | || || ||| || | ||||||| |||| |||||| | | |||||| || | Sbjct 989237 TGGTGCCAGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTTGAGACCAATGCCGC 989296 Query 110897 CCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAAT 110956 | || ||| ||||| ||||| |||| || | || || || || ||||| | Sbjct 989297 CAGCGGTCTTGGAGATTTGGGCACAAGACTTGAGGGTTTCGTAGATGCCTTCGATCGAGT 989356 Query 110957 CTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGA 111016 || |||| ||| | || ||||| || ||||| |||||||||||||| || || |||| Sbjct 989357 CTTCCTTCATGGTCAAGAGGAAGCACGAGGACATTTGAGGACGAGGCGTGCCGGCGTTGA 989416 Query 111017 AGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTG 111076 |||| ||||| | ||||| |||| | | | ||||||| | ||| || || | | Sbjct 989417 AGAGCGTAGGGCTGGCATGGGTGAAGAAGCGCTCGGACATCAATTGGTAGGTTTCCAAAG 989476 Query 111077 CGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG 111134 | | | || | |||||||| || | ||| || ||||||| || | |||||| Sbjct 989477 CAGCATCGATGTCGTCGCCGTGAATCCCGACGGCCACACGCATGATCAAGTGTTGAGG 989534 >seq25 Length=485700 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 109405 GAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAA 109464 || || || || ||||| || || ||||| || ||||| ||||| | ||||| || Sbjct 239078 GATCGTAGGTAGTACATGCCGGTCTTGAGGCCCTTTTTCCAGGCGTAAAAGTGCATGGAG 239019 Query 109465 GAGAGTTTGGAAAGTGTCGGACTCTCCA-TAAACAAGTTCATCGACTGAGACTGATCGAT 109523 | || ||| || || || ||| ||| | ||||||||||| || || ||||||||||| Sbjct 239018 GTCAGCTTGCCAAAGGTAGG-CTCGCCAGTGAACAAGTTCATGGATTGGGACTGATCGAT 238960 Query 109524 GAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGT 109583 || ||||||||| || |||||||||||||| | ||| |||||||| || || Sbjct 238959 AAAAGCACCACGATCGGCAGCCATGTCGATGATCACCCGTTGAGAGATTTCCCACACGGT 238900 Query 109584 CTTGTACAAATTCTTGATATCATCGGGAATG 109614 |||||| | | ||||| || ||||||||| Sbjct 238899 CTTGTAAAGAGCCTTGAGGTCGTCGGGAATG 238869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975160709200