Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq34 104 3e-17 >seq34 Length=381833 Score = 104 bits (114), Expect = 3e-17 Identities = 179/255 (70%), Gaps = 5/255 (2%) Strand=Plus/Plus Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505 ||||| |||||||| || | ||| || |||| | ||| ||||||||||| || || Sbjct 50253 ATATAGGTATCAATCAGCAGACTGTAAGTTTCGGCGTGGATATTTTCAATCATGATTTGG 50312 Query 37506 AAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAG 37565 |||||||| |||||| | ||||| | | | || |||| | ||| | | | ||| Sbjct 50313 AAACCATAGAAACACTTGGCTTCGGCAATCTTGACTTCGTCCATAAAGTTTTGCACCAAG 50372 Query 37566 TTTTCATTAACTATCCCATCACTAGCT-GCAAAGAAAGCAAGAACATATTTTATAAAATG 37624 |||||||| || || || || | |||| |||||||| ||||| | || ||||| | Sbjct 50373 TTTTCATTGACAATACCGTC-CGAGCTGGCAAAGAAGGCAAGGATATGCGAGATAAAGTA 50431 Query 37625 TCTTTCATCATT--TGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTC 37681 | |||||| || | || | |||| ||||||| || ||| || || | ||||| ||| Sbjct 50432 CCGTTCATCCTTGGTCATCTTGTTTTCCCAATCACCAAGATCCTTGGAGAGATCAATTTC 50491 Query 37682 ATCAACGGTCCAAAA 37696 ||| | ||||| || Sbjct 50492 TTCAGCAGTCCAGAA 50506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592315955948560