Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq71 131 1e-25 seq27 131 1e-25 seq21 127 2e-24 seq77 116 3e-21 >seq71 Length=978913 Score = 131 bits (144), Expect = 1e-25 Identities = 161/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || || | ||| ||||| ||||| || ||||| || | || ||| | | | Sbjct 432822 ACGCAGAACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCC 432763 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || ||||| || | ||| ||||| || || || || |||||||| Sbjct 432762 ATCTTCAAGTTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACCTTCTTT 432703 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||||||| ||||| || || | || | || ||| || | ||| ||||| | |||| Sbjct 432702 ATCTTGAATCTTTTGCTTGACGTTATCAATAGAGTCCGAGGATTCGACTTCCAAGGTGAT 432643 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTT 101473 || ||||| || | ||| || || || || |||||| || Sbjct 432642 GGTCTTGCCAGTAAGAGTCTTGACGAAAATTTGCATGATT 432603 >seq27 Length=1513655 Score = 131 bits (144), Expect = 1e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || || ||||||||||| || ||||| || | | || | | |||| |||| ||| Sbjct 1427449 ATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCTGATAGGGTACGGCCATCCTCCAGTTG 1427508 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||||||| |||||||| || ||||||||||| || |||||||| || Sbjct 1427509 CTTGCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCTTGAATCTT 1427568 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || ||| || | | || || | || ||||| | || | ||||| || || Sbjct 1427569 CTGCTTGACATGCTCAATGGCATCCGAGGACTCGACTTCCAATGTAATAGTTTTTCCAGT 1427628 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 |||||||| ||||| || |||||| Sbjct 1427629 CAAAGTTTTGACAAAGATTTGCATG 1427653 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || | ||| ||||| ||||| || ||||| |||| | || | | || ||| Sbjct 550377 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCGTCTTCC 550318 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||||||||| ||||| |||| ||| ||||| || || ||||| |||||||| |||||| Sbjct 550317 AATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCAGGAGGAATACCTTCTTTGTCTTGA 550258 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412 || ||||| || ||| | || | | |||||| Sbjct 550257 ATCTTTTGCTTGACATTGTCGATCGAGTCAGA 550226 >seq21 Length=571097 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || |||||||||||||| || ||||| || | || ||| | | |||| || | ||| Sbjct 539667 TGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCGAGCTGC 539726 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | ||| ||||| || || || ||||||||||| ||||| || ||| Sbjct 539727 TTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTGGATCTTT 539786 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || || | || | || ||| || | ||| ||||| ||||| | || ||||| || Sbjct 539787 TGCTTGACGTTATCAATAGAGTCCGAGGATTCAACTTCGAGAGTAATAGTCTTGCCAGTC 539846 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| || ||||| Sbjct 539847 AGGGTCTTGACAAAGATTTGCAT 539869 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || |||||||||||||| || ||||| || | || ||| | | |||| || | ||| Sbjct 539895 TGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCGAGCTGC 539954 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | ||| ||||| || || || ||||||||||| |||||||| ||| Sbjct 539955 TTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTGAATCTTT 540014 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || || | || | | ||| || | ||| ||||| ||||| | || ||||| || Sbjct 540015 TGCTTGACGTTGTCAATTGAGTCCGAGGATTCAACTTCGAGAGTAATAGTCTTGCCAGTC 540074 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | || || || || || |||||| Sbjct 540075 AGGGTCTTGACGAAGATTTGCATG 540098 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || | ||| |||||||| || || ||||| || | || ||| | | |||| || Sbjct 539433 ACCAAGTGCAAGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCG 539492 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| || | ||| ||||| || || || ||||||||||| ||||| Sbjct 539493 AGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTGG 539552 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||||| || || | || | | ||| || | ||| ||||| ||||| | || ||| Sbjct 539553 ATCTTTTGCTTGACGTTGTCAATTGAGTCCGAGGATTCAACTTCGAGAGTAATAGTCTTG 539612 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || ||||| || ||||| Sbjct 539613 CCAGTCAGGGTCTTGACAAAGATTTGCAT 539641 >seq77 Length=46662 Score = 116 bits (128), Expect = 3e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || | ||| ||||| ||||| || |||||||||| | ||| | |||| ||| Sbjct 33838 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAATCGGAAAGAGTACGACCATCTTCC 33779 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||||||||| ||||| ||||| || || || || || ||||| |||||||| |||||| Sbjct 33778 AATTGCTTACCAGCAAAAATCAAGCGTTGCTGGTCAGGAGGAATACCTTCTTTGTCTTGA 33719 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412 || ||||| || ||| | || | | |||||| Sbjct 33718 ATCTTTTGCTTGACATTGTCAATGGAGTCAGA 33687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277849420698