Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq60 87.8 2e-12 >seq60 Length=1071548 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 197028 CTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCGGGATT 197087 ||| ||||| ||||| || || ||||| || ||||| | ||| || | ||||||||| Sbjct 999615 CTCTTCGCTGAAGCCGGTGCCTATCTTGCAGATGGACTGGTATTCCTCGGTGTCGGGATC 999556 Query 197088 GTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCC 197147 ||| ||||| |||||||| | || ||| ||| | || || || | | || Sbjct 999555 GTAGCAGGCTAGTAAGAAGGTACCATAGACCGACGTACGTTTGCCGCGACCATAGTCACC 999496 Query 197148 TCCGATAACCACCAGATCCAGAGTGTCGCACA--CCCCTTCCATGTAATCTTTCTTCAGT 197205 ||||| | ||||||||| | || |||| || || ||| || |||||||||||| Sbjct 999495 ACCGATGATCACCAGATCGACAGAATCGCCCATGCCGCTTAGAT--AATCTTTCTTCACC 999438 Query 197206 TTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGC 197246 |||||||| | | |||| ||| | | ||| || ||||| Sbjct 999437 TTGAGCCAATTGCGGGATCGCTTAGAAGGCTCATAAGTTGC 999397 Score = 84.2 bits (92), Expect = 3e-11 Identities = 105/142 (74%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 197455 TCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTTCCTTGACATCTTTACGTTTT 197514 ||||| ||||||| | ||| || ||||| || |||||||||||||||||||| || || Sbjct 999124 TCAAAGGCAAAGATGGCCACTTGCACGGTGATATCTTCTTCCTTGACATCTTTGCGCTTA 999065 Query 197515 CTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTT--CTTCTCAACGTCCCAAGCAACTG 197572 | ||| || ||||||| || || | ||||| ||| || |||||| ||||| | Sbjct 999064 CGGGTACTTAGGATTTGAAACGGCAGAA--TGCTTTCCTTGGCACGGTCCCATGCAACGG 999007 Query 197573 CCTCAGCGTCCAAGATGAAAGA 197594 | ||| ||||| ||||| || Sbjct 999006 CTTCACAATCCAAAATGAATGA 998985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676728635660320