Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq27 125 5e-24 >seq27 Length=1513655 Score = 125 bits (138), Expect = 5e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||||||||||| ||||| || ||||| | || | || |||| || Sbjct 1427449 ATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCTGATAGGGTACGGCCATCCTCCAGTTG 1427508 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| |||||||| |||| || |||||||| | |||| ||| |||||||| |||||| Sbjct 1427509 CTTGCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCTTGAATCTT 1427568 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || || ||| | | | || || | ||| || |||| ||||| |||||||| || Sbjct 1427569 CTGCTTGACATGCTCAATGGCATCCGAGGACTCGACTTCCAATGTAATAGTTTTTCCAGT 1427628 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 ||||||||| ||||| || ||||| Sbjct 1427629 CAAAGTTTTGACAAAGATTTGCAT 1427652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937070734822