Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq38 307 2e-78 seq25 111 3e-19 seq34 109 1e-18 >seq38 Length=1275103 Score = 307 bits (340), Expect = 2e-78 Identities = 999/1528 (65%), Gaps = 54/1528 (4%) Strand=Plus/Plus Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 ||| || ||||| || |||| | ||||||| ||||||||||||||| |||| | Sbjct 987942 GTCGGCAGCCATATCGATGAGGGTGCGTTGGGAGATTTCCCACACGGTCTTGTAGATGGC 988001 Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA-GCT 212850 |||||||| || |||| | |||||||| ||| ||||| || ||| || || | | Sbjct 988002 TTTGAGGTTATCGGGGATGTTGGGGATGTGCTGGACAGAGCCGTTGTC---GGACATGAT 988058 Query 212851 GCAGGCGCATG---TCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAG 212907 || || | || || || ||||||| ||| | ||||| ||||| ||| | Sbjct 988059 GC-GGTTCTTGATTTCATCATTCCAGATGCCAAGCTCCACCAGGTCCTTGAGCAGCCAGG 988117 Query 212908 GGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGG 212967 ||||| | | ||||| ||||| | || |||| | ||||| || || ||||||| Sbjct 988118 GGTTGGCGACTTGGAATTCACCGGCAAGGACCCGGCGGGTGTAAAGATTGGATGTGTAGG 988177 Query 212968 GCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCA 213027 |||||| || |||||| || || || |||| || ||| || |||||||| || | Sbjct 988178 GCTCGAAGCATTCGTTGAAGCCGAGCATTTGTGAGGTAGAGGCGGTAGGCATGGGGGCGA 988237 Query 213028 CCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCC 213087 ||||||| ||| | ||| ||||||| || || | | || | |||||||||| Sbjct 988238 CCAGGAGCGAGTTGCGCACGCCGTGCTTGCTGACTTGTTCCTTGAGGGCGGCCCAGTCCC 988297 Query 213088 ATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGC 213147 | | | | ||| | || | ||||||||| |||| ||||| |||||| Sbjct 988298 AGAGGTCGGT-AGGAG--------TGACATCCCACATGTCGTACTGGAAGATACCTTTGG 988348 Query 213148 TCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACG 213207 ||| ||||| || | ||| | ||| || || |||| ||||||||| || | Sbjct 988349 ACACAGGGCTTCCTTCGTAGGTTTCGTAAGGACCGAGCTCACGGGCCAGCTCCATTGAGG 988408 Query 213208 CCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTG 213267 | || ||| |||| ||| || |||||||| || | | ||| | | |||||| || Sbjct 988409 TTTCCATGGCGGCGTGGTAAATAGTTTCAAAGATTTGACGGTTCAACAGCTTGGCTTCGT 988468 Query 213268 GGGACGTGAAGGGCAT----CATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323 || ||||| || ||||| || | || |||| ||||| || ||||| ||| Sbjct 988469 CTGATTCAAAGGG-ATAGCGCATCA-GCATA--AAGGCATCGGCCAGACCTTGGACACCG 988524 Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGGAGCACTCCTCCAAGGGGTAAAAGTT 213382 | || ||||| | ||| | | ||| || | | || ||| | ||||| |||| Sbjct 988525 AGACCAATGGGGCGGTGACGCTTGTTGGAGCGTTCGGC-CTCGATGACAGGGTAGTAGTT 988583 Query 213383 GCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGC---CAGGTA 213439 | ||||||||||||||| ||||||||||| || |||||||| ||| ||| | Sbjct 988584 GATGTCGATGATCTTGTTCAGGTTGCGGGTAATGACCTTGGTGAC---GGCATGCAGCTT 988640 Query 213440 CTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAG 213499 || | | || | || | || ||| | || || ||||| |||||||| Sbjct 988641 CTTAA-AGTCAAAAG--AGGTGCGGTTGACGACATAGGAGGGAAGAGCGATACTGGCCAG 988697 Query 213500 GTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCT 213559 |||||| ||||| | || | || | | |||||| | || ||||| |||||||| || Sbjct 988698 GTTGCACACGGCGATTTCATCAGGGCTGGAGTACTCGACAATTTCGGTACACAGGTTACT 988757 Query 213560 GCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAGA 213618 ||| ||||||||| ||||| || ||||| || |||||| | |||| ||| || || | Sbjct 988758 GCACTTGATGGTGCCGAGGTTTTGTTGGTTGGA-TTTGCGGTTGCAGGCATCTTTATACA 988816 Query 213619 GCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGG 213678 |||| ||||| ||||| || |||| ||| || | ||| || | || Sbjct 988817 GCATAAAGGGGTTGCCGGTTTCGGTTTGGGCTTCCATGATGGCGTACCACAGCTTTTGGG 988876 Query 213679 CCTTGACCACCCGCCTGAC-AGCTCCGGGCGTAGCCT-CGTACTGTTCGTAGAGCTCGTT 213736 |||||| | | || | ||| | || | | | |||| | | || ||||| | Sbjct 988877 CCTTGATC----GTTTGGCGAGCAC-GGCCTTCTTGTTCGTAGCGGGCATACAGCTCTTC 988931 Query 213737 GAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCG---GGACACATGAGGCT 213793 |||||| | |||||| || || ||| || || || | || ||||| | || Sbjct 988932 GAATTCATCGCCCCATACTTCGTGCAGACCAGG---GGCTTCGTTGGGACAGAACAGCGA 988988 Query 213794 CCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAA 213853 ||| || |||| || || | || |||||| || || || ||||||||||| ||| Sbjct 988989 CCACTCGCCGTTGGCTTCCACACGCTTCATGAAGAGATCAGGCACCCACAGCGCATAGAA 989048 Query 213854 CAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAA 213913 ||| || | || | | |||||| || ||| ||||| || || | |||| || Sbjct 989049 CAGATCACGGGCACGGATTTCGTCCTTGCCGACGTTCTTGCGAAGGTCCAAAAAGGTGAA 989108 Query 213914 GATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCC 213970 || || |||||||| || |||| ||| |||||||| || || | || | ||||| || Sbjct 989109 GACATCGGCGTGCCAAGGTTCCAGGTACATGGCAAAAGCACCGGGACGCTTGTTGCCACC 989168 Query 213971 CTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGA 214030 || || || | ||| ||||||||| || || | ||| | || |||||||| Sbjct 989169 TTGATCGACGTAGCGGGCAGTGTTGTTGAAGACTCGGAGCATGGGCAGGAGACCGTTGGA 989228 Query 214031 CTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCC 214090 | |||||||| || || || || ||||| | ||| | | |||| ||| ||| || Sbjct 989229 GTAGCCGTTGGTGCCAGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTTGAGACC 989288 Query 214091 TATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGC 214150 ||||| || ||| ||||||||| ||| || | | | || || |||||| | Sbjct 989289 AATGCCGCCAGCGGTCTTGGAGATTTGGGCACAAGACTTGAGGGTTTCGTAGATGCCTTC 989348 Query 214151 CATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCC 214210 || ||| || | | | ||| | |||||| || | || || | | || ||| Sbjct 989349 GATCGAGTCTTCCTTCATGGTCAAGAGGAAGCACGAGGACATTTGAGGACGAGGCGTGCC 989408 Query 214211 AGAGTTGAAAAGCGTGGGGCTGGCATGG 214238 | |||||| ||||| |||||||||||| Sbjct 989409 GGCGTTGAAGAGCGTAGGGCTGGCATGG 989436 >seq25 Length=485700 Score = 111 bits (122), Expect = 3e-19 Identities = 303/463 (65%), Gaps = 11/463 (2%) Strand=Plus/Minus Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||||| || || | | |||||||| || || || || |||||||| ||||||||| Sbjct 238666 GTGTAAGGTTCAAAACATTCGTTGTTGCCGAGGATTTGGCTGGTGCTGGCGGTGGGCATG 238607 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAG-GCGCCGAAGCTCTGC 213079 || || || || || ||| | || ||||||| | ||| | | || | || | || | Sbjct 238606 GGGGCGACAAGCAGGGAGTTGCGAACACCGTGCTTGACGACGCGAGCTCGGAGGGCCT-C 238548 Query 213080 CCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGAT 213139 ||||||||| | | |||| | ||| |||| ||||||||| ||||| |||| Sbjct 238547 CCAGTCCCAGCGGTCAGAGGG---------CTTGACGTCCCACATGTCGAACTGGAAGAC 238497 Query 213140 GCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTC 213199 ||||| ||| | ||| ||| || | ||||| ||| || | || | || Sbjct 238496 GCCTTGGCTGATGGGCGAGCCAGGGAAGCTTTCGTAGGCACCAACCTTGGTAGCAATGTC 238437 Query 213200 GCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTT 213259 ||| ||||| | ||| || |||| ||||||||||||||| || ||| |||| | | Sbjct 238436 GCAAGACGCTTCCAGTGCTGCGTGGTAGATGGTTTCAAAAATATCCTTGTTCAATTGGCG 238377 Query 213260 GGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGAC 213319 ||| || || || ||| |||| || | ||| | || ||||| || ||||| Sbjct 238376 GGCTTCGGGCGATTCGAATGGCAAGCGCAGCAGCAAGAAGGCGTCGGCCAGACCTTGGAC 238317 Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAA 213379 |||| || | || | || | || ||| ||| | || |||| || || Sbjct 238316 GCCGAGACCCACAGGGCGATGGCGCATGTTGCTCTTTCGGGCTTCTTCCACTGGATAGTG 238257 Query 213380 GTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTG 213422 ||| || |||| |||||| |||||| ||||| |||| ||| Sbjct 238256 GTTCACATCAATGACCTTGTTCAGGTTGTGGGTGACCACCTTG 238214 Score = 95.1 bits (104), Expect = 2e-14 Identities = 224/334 (67%), Gaps = 11/334 (3%) Strand=Plus/Minus Query 213821 CATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCAC 213880 |||||||||||| |||| ||| ||| | ||||||||| | | | | || ||| Sbjct 237712 CATGAACAGGTCAGGGATCCAGAGCCCCAGGAACAGGTCACGTGCACGCAGTTCTTCCTT 237653 Query 213881 TCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTA 213940 || ||||| |||||||| || | |||||||| | ||| | ||||| || |||| ||| Sbjct 237652 GCCCGAGTTCTTGCGCAGGTCCAAGAAGTCAAACACATCCACATGCCAGGGTTCCAAGTA 237593 Query 213941 GATGGCAAAGGCGCC-CGGCCTCT--TGCCGCCCTGGTCCACCAGCCTGGCCACCATGTT 213997 ||||||||| ||| || | | ||| |||||| ||| | | ||| ||| Sbjct 237592 CATGGCAAAGCTGCCGTTGCGTTTACCGCCACCCTGGGTCACAAAGCGAGCCGTGTCGTT 237533 Query 213998 GAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGA 214057 | | | ||||| | ||| || | |||||||| |||||||| || || || ||||| Sbjct 237532 GTACACACGCAGCATGGGCACAATGCCGTTGGAGGTGCCGTTGGTGCCAGCAATGTACGA 237473 Query 214058 GCCGGAGGCCCTCAGGTTGCTCATGGA----GAGCCCTATGCCACCGGCGTACTTGGAGA 214113 ||| ||| || | | | || |||| || |||| || ||||| | ||||||| Sbjct 237472 GCCAGAG--CCGCGGAT--CTTTTGGAAACTGACGCCTACACCGCCGGCTGATTTGGAGA 237417 Query 214114 TCATGGCGCAGCGCCTCACAGTCTCCATGATGCC 214147 || ||| ||| | ||| || || |||||| Sbjct 237416 TCTGGGCACAGGTCATCAAGGTATCATAGATGCC 237383 >seq34 Length=381833 Score = 109 bits (120), Expect = 1e-18 Identities = 279/421 (66%), Gaps = 13/421 (3%) Strand=Plus/Plus Query 47858 TTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTG 47917 || ||||||||||| ||||| || | | || || | ||||| ||| ||||||||| Sbjct 49665 TTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAAATCATGTCCATAAAGTCAAAGGGGTTG 49724 Query 47918 GGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCG 47977 | || |||||| | |||||| ||||||| | || || ||| | || Sbjct 49725 ATGGATTTGTACACCTTTTCTTGGCCCAAGGCGACCAGCAGACGGTCAGCAACGAATTCA 49784 Query 47978 ATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTG 48037 ||||||| |||| | ||| |||||||| || | || || ||||| || | || Sbjct 49785 ATGTATTGGCACATCAACGTGGCATTCATGCCAATCAAGGCGACAGGCAAGGCATCGGTT 49844 Query 48038 AGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGAC--TCTG 48095 | || || | || |||| |||||||| ||||| | || || | || || | Sbjct 49845 AAGAATTCTTGTTCGATCTTGACGGCTTCG---ACAAT--GATTTCCGTGATACGTTCGG 49899 Query 48096 AG---GGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGC 48152 || |||| || | | ||| || | |||| ||||||||||| |||| | || Sbjct 49900 AGCTGGGTTGCTTATGGATGTGGCTGA---ACAGCAGACAGGCAAAGTCGGTGTGGAGGC 49956 Query 48153 CTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTT 48212 ||||||| |||| || || ||||||||||| | ||||||||| | |||| || | Sbjct 49957 CTTCGTCGCGGCAAATCAGTTCGTTGGAGAAGGTCAAACCAGGCATCAAGCCCCGCTTCT 50016 Query 48213 TGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACG 48272 | | |||||| || | || || | ||| |||||||| || || || || || || || | Sbjct 50017 TCAACCAGAAGATGGAGGCAAAGGCGCCCGAGAAGAAAATACCTTCGACAGCAGCAAAGG 50076 Query 48273 C 48273 | Sbjct 50077 C 50077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531472565760