Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq56 226 4e-54 >seq56 Length=149020 Score = 226 bits (250), Expect = 4e-54 Identities = 395/568 (70%), Gaps = 10/568 (2%) Strand=Plus/Plus Query 47758 TCAACAAACTGACGGACAGAATATTGATTTC--CTGTGGCAATAACAAAATCATCAGGTT 47815 |||||||| ||||||| | | | |||| | ||||| | ||||| ||||| | || Sbjct 78677 TCAACAAAGGAGCGGACAG--TGTGGGTTTCACCGGTGGCCAAGACAAAGTCATCGGCTT 78734 Query 47816 CTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCAC 47875 |||||||||| | ||| ||||||||| | |||||||| || | |||||| ||||| |||| Sbjct 78735 CTTCTTGTTGCAACATCAACCACATACCTTCGACATAGTCACGGGCATGACCCCAATCAC 78794 Query 47876 GAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTTA 47935 | ||||| | || || | || || || ||||| || | ||| | | Sbjct 78795 GCTTGGCATCGATGTTACCCAAGTACAAGCATTCTTGACGGCCCAAATGGATGTCAGCGA 78854 Query 47936 ATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAA 47995 || | || ||||| || || ||||| || ||||| | |||||||| || || | Sbjct 78855 CGGCACGGGTGATCTTGCGGGTGACAAAGGTACGGCCACGGCGGGGAGATTCGTGGTTGA 78914 Query 47996 AAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGT 48055 | |||||||| |||||||| |||| ||| |||||||| ||||| || ||||||| Sbjct 78915 ACAGAATACCGTTACAGGCAAACATGTTGTAGGATTCACGGTAGTTGACAACGATCCAGT 78974 Query 48056 ACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCT 48115 | || || || || || |||||||| |||||||| || ||||| || ||||| || | | Sbjct 78975 AACCGTACAGCTTGGCCACACCATAGGGAGAACGAGGGTAGAAGGGAGTGGTTTCCTTTT 79034 Query 48116 GTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACCC 48175 | ||||| || ||||||||| || | |||| ||| || ||||| |||| ||| || | Sbjct 79035 GAGGAGTTTCCACCACCTTACCGTACAATTCAGAGGTAGAGGCTTGGTAGAAACGGACAC 79094 Query 48176 TATCTTCC--ATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGTGCCTATGGCATC 48233 || || | | |||| ||||| || || | || | || ||| || | |||||| Sbjct 79095 GGTCGGCCAGACCGCAAG--TACGGATGGCATCCAACAAACGCAAGGTACCGAGGGCATC 79152 Query 48234 TGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGACTCTGTGC-CCCAA 48292 | |||||| || || | ||| ||||| || ||||| |||||| || || |||| Sbjct 79153 CACGTCACCAGTGTATTCAGACATATCAAAGGACACCTTGACATGAGATTGAGCAGCCAA 79212 Query 48293 GATTATAAATCTCATCTGGTTGAACCTG 48320 | || |||| ||| ||||| || || Sbjct 79213 G-TTGTAAACTTCAGTGGGTTGCACTTG 79239 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48385 TAAATGTGATCAATTCTATGTGTATTAATTAAAGAAGCCCGACGGACAATACCATGAACC 48444 |||||||| ||||| | | || || | |||||| || || | ||||||||||| Sbjct 79380 TAAATGTGTTCAATACGACCAGTGTTGAAGGAAGAAGAACGGCGAATGATACCATGAACT 79439 Query 48445 TCATACCCCTTTTCAAGAAGAAGTTCTGCTAAGTATGAACCATCTTGTCCTGTAATACC 48503 ||||| |||||||| | ||| | ||| || ||||| ||||||||||| || || ||||| Sbjct 79440 TCATAACCCTTTTCCAAAAGGAATTCAGCCAAGTAAGAACCATCTTGACCAGTGATACC 79498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665493451670480