Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq38 179 4e-40 seq56 136 5e-27 seq25 84.2 3e-11 seq34 82.4 9e-11 >seq38 Length=1275103 Score = 179 bits (198), Expect = 4e-40 Identities = 1097/1739 (63%), Gaps = 50/1739 (3%) Strand=Plus/Minus Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278 || || ||||||| || || |||| || ||||| || ||||| ||| ||| ||||| | Sbjct 989527 ACTTGATCATGCGTGTGGCCGTCGGGATTCACGGCGACGACATCGATGCTGCTTTGGAAA 989468 Query 75279 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 75338 | ||| | ||||||| | | | |||| || || | || || |||||||| || | Sbjct 989467 CCTACCAATTGATGTCCGAGCGCTTCTTCACCCATGCCAGCCCTACGCTCTTCAACGCCG 989408 Query 75339 GTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCA 75398 | || || | || || |||||| |||||||| | ||| ||||| ||||| ||| Sbjct 989407 GCACGCCTCGTCCTCAAATGTCCTCGTGCTTCCTCTTGACCATGAAGGAAGACTCGATCG 989348 Query 75399 ACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTG 75458 | || ||||| | ||| || | | ||||| |||||||| ||| ||||| || |||| Sbjct 989347 AAGGCATCTACGAAACCCTCAAGTCTTGTGCCCAAATCTCCAAGACCGCTGGCGGCATTG 989288 Query 75459 GGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAAT 75518 | | ||||||| | | | |||| | ||| ||| || || || || | | Sbjct 989287 GTCTCAACATCCACAACATCCGTGCCACTGGCTCTTACATTGCTGGCACCAACGGCTACT 989228 Query 75519 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 75578 | | ||| | | || ||||| || || || ||| ||| || ||||| || |||||| Sbjct 989227 CCAACGGTCTCCTGCCCATGCTCCGAGTCTTCAACAACACTGCCCGCTACGTCGATCAAG 989168 Query 75579 CGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATA 75632 || ||||| | || | | || | ||| ||||||| ||||| |||||| Sbjct 989167 GTGGCAACAAGCGTCCC---GGTGCTTTTGCCATGTACCTGGAACCTTGGCACGCCGATG 989111 Query 75633 TCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA-GAGAT 75691 || | || | || | || ||| || | || || || ||| | ||| Sbjct 989110 TCTTCACCTTTTTGGACCTTCGCAAGAACGTCGGCAAGGACGAAA-TCCGTGCCCGTGAT 989052 Query 75692 CTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAA 75751 || || | | |||||| | || || || ||||||||||| || || | || | Sbjct 989051 CTGTTCTATGCGCTGTGGGTGCCTGATCTCTTCATGAAGCGTGTGGAAGCCAACGGCGAG 988992 Query 75752 TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTT 75811 ||||| || |||||||| || | || || ||||| ||| | ||| || || || Sbjct 988991 TGGTCGCTGTTCTGTCCCAACGAAGCCCCTGGTCTGCACGAAGTATGGGGCGATGAATTC 988932 Query 75812 GAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCGACTGTACCAGCC 75868 |||| || || | || ||| | || || | || | | ||| | || | Sbjct 988931 GAAGAGCTGTATGCCCGCTACGAACAAGAAGGCCGTGCTCGCCAAACGAT----CAAGGC 988876 Query 75869 GCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCT 75927 | | | | ||| | || || | || | || || || || || | || | |||||| Sbjct 988875 CCAAAAGCTGTGGTACGCCATCATGGAAGCCCAAACCGAAACCGGCAACCCCTTTATGCT 988816 Query 75928 TTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTC 75987 || || ||||| || ||| || |||||| | || | || || |||||| || Sbjct 988815 GTATAAAGATGCCTGCAACCGCAAATCCAACCAACAAAACCTCGGCACCATCAAGTGCAG 988756 Query 75988 AAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTT 76047 || || || || |||||| | |||||| | ||||| | || || ||||| | Sbjct 988755 TAACCTGTGTACCGAAATTGTCGAGTACTCCAGCCCTGATGAAATCGCCGTGTGCAACCT 988696 Query 76048 GGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAA 76107 ||| ||||| ||||| |||||| | || | | | | ||||||| | | | || Sbjct 988695 GGCCAGTATCGCTCTTCCCTCCTATGTCG-TCAACCG-CAC-CTCTTTTGACTTTAAGAA 988639 Query 76108 ACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTT 76167 || |||| |||| ||| | ||||| || || ||| |||| |||| || | Sbjct 988638 GCTGCATGCCGTCACCAAGGTCATTACCCGCAACCTGAACAAGATCATCGACATCAACTA 988579 Query 76168 TTATCCCGTT---GAGACTGCGCGAAAG-TCTAATATGCGACACAGACCTATTGGTTTGG 76223 || || || ||| | |||| | || || | ||| ||| | || |||||| | | Sbjct 988578 CTACCCTGTCATCGAGGC----CGAACGCTCCAACAAGCGTCACCGCCCCATTGGTCTCG 988523 Query 76224 GTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAG 76283 |||| |||||||| || |||| ||||| || ||||| | ||||| ||||| |||| Sbjct 988522 GTGTCCAAGGTCTGGCCGATGCCTTTATGCTGATGCGCTATCCCTTTGAATCAGACGAAG 988463 Query 76284 CCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTT 76343 ||||| | |||| || ||||||||||| || || ||||| || |||| | Sbjct 988462 CCAAGCTGTTGAACCGTCAAATCTTTGAAACTATTTACCACGCCGCCATGGAAACCTCAA 988403 Query 76344 GTGAATTGGC---TGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCC 76400 || |||| || ||| | ||| | || || || | || || || | |||| Sbjct 988402 TGGAGCTGGCCCGTG-AGCTC--GGTCCTTACGAAACCTACGAAGGAAGCCCTGTGTCCA 988346 Query 76401 AAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTACGACTGGGAT 76459 |||| | | |||| || ||||||| | || | || | | | || ||||||| Sbjct 988345 AAGGTATCTTCCAGTACGACATGTGGG-ATGTCACTCCTACCGACCTCTGGGACTGGGCC 988287 Query 76460 GTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATG 76519 | |||||||||| ||| || | || | || ||| || || | || || ||| Sbjct 988286 GCCCTCAAGGAACAAGTCAGCAAGCACGGCGTGCGCAACTCGCTCCTGGTCGCCCCCATG 988227 Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579 || || ||||| ||| ||||||| | || || |||||||| || || |||||| | Sbjct 988226 CCTACCGCCTCTACCTCACAAATGCTCGGCTTCAACGAATGCTTCGAGCCCTACACATCC 988167 Query 76580 AACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCAC---CTC 76636 || | ||| | | ||| || ||||| | || ||| ||| | | || Sbjct 988166 AATCTTTACACCCGCCGGGTCCTTGCCGGTGAAT---TCCAAGTCGCCAACCCCTGGCTG 988110 Query 76637 GTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAA 76696 |||| ||||| | || |||| ||||| | || || ||| | | ||| || Sbjct 988109 CTCAAGGACCTGGTGGAGCTTGGCATCTGGAATGATGAAATCAAGAACCGCATCATGTCC 988050 Query 76697 GCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGC 76756 | || || | || | ||| | | ||||| ||| | |||| ||||| Sbjct 988049 GACAACGGCTCTGTCCAGCACATCCCCAACATCCCCGATAACCTCAAAGCCATCTACAAG 987990 Query 76757 ACAGTGTGGGAAA--TCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCT 76814 || |||||||||| || | | | |||| || ||||| || || |||||| || Sbjct 987989 ACCGTGTGGGAAATCTCCCAACGCA--CCCTCATCGATATGGCTGCCGACCGTGGTGCCT 987932 Query 76815 TCATTGATCAAAGTCAAAGTATGAATCTATTCA-TGGAAAGTCCAACGATGTCCAAGCTC 76873 | || |||||| |||||| | || | |||| ||| | | ||| || |||||| Sbjct 987931 TTATCGATCAATCCCAAAGTCTCAACGTGTTCATTGGCGTGCCTAACTTTG-GCAAGCTG 987873 Query 76874 TCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | || ||||| | |||| ||||| |||| || || || || ||||||||||| || Sbjct 987872 ACCTCCATGCACTTTTACGGCTGGAAGAAGGGTCTGAAGACGGGTATGTACTATCTGCG 987814 >seq56 Length=149020 Score = 136 bits (150), Expect = 5e-27 Identities = 289/424 (68%), Gaps = 18/424 (4%) Strand=Plus/Plus Query 177557 TTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCT 177616 |||||||||| | |||| ||| || || || || || | ||| | ||||| || | Sbjct 78675 TTTCAACAAAGGAGCGGACAGTGTGGGTTTCACCGGTGGCCAAGACAAAGTCATCGGCTT 78734 Query 177617 CTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTC 177676 |||||||||| | ||| | |||||| |||| |||||||| |||||||||||| || | Sbjct 78735 CTTCTTGTTGCAACATCAACCACATACCTTCGACATAGTCACGGGCATGACCCCAATCAC 78794 Query 177677 ---TGGCAGCGTTGAGGTTACCGA-GTTCAAGGAACTCTCTCTCACCTTTCACA---ATT 177729 ||||| || || ||||| | || |||| | ||| | || || | || Sbjct 78795 GCTTGGCATCGATG---TTACCCAAGTACAAGCAT---TCT-TGACGGCCCAAATGGATG 78847 Query 177730 TGTTTGACGCCATCAGTAATCTTCTTTGTGACAAAGT--CGGCACCTCGTCTCGGTGATT 177787 | |||| || || ||||| ||||||||| |||| | || | || |||| Sbjct 78848 TCAGCGACGGCACGGGTGATCTTGCGGGTGACAAAGGTACGGC--CACGGCGGGGAGATT 78905 Query 177788 CGTGGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGA 177847 |||||||||| || || ||| |||||| |||| |||||||| ||||| || | Sbjct 78906 CGTGGTTGAACAGAATACCGTTACAGGCAAACATGTTGTAGGATTCACGGTAGTTGACAA 78965 Query 177848 CGAGCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCT 177907 ||| ||||| | || || |||| || |||||| || || ||||||||||| || Sbjct 78966 CGATCCAGTAACCGTACAGCTTGGCCACACCATAGGGAGAACGAGGGTAGAAGGGAGTGG 79025 Query 177908 CCTCAGTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTATA 177967 || |||| |||||||| || ||||| ||| || || || ||||||||||| | Sbjct 79026 TTTCCTTTTGAGGAGTTTCCACCACCTTACCGTACAATTCAGAGGTAGAGGCTTGGTAGA 79085 Query 177968 CACG 177971 ||| Sbjct 79086 AACG 79089 >seq25 Length=485700 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 76727 ATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAA-AGATG- 76784 || || || || ||||| ||| ||| || |||||||||||| | || | || Sbjct 238870 ATTCCCGACGACCTCAAGGCTCTTTACAAGACCGTGTGGGAAATC--TCTCAACGGGTGA 238927 Query 76785 TCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTAT 76844 |||| |||||||| || ||||||||| || || ||||| ||| ||||| | | Sbjct 238928 TCATCGACATGGCTGCCGATCGTGGTGCTTTTATCGATCAGTCCCAATCCATGAACTTGT 238987 Query 76845 TCA-TGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAG 76903 ||| ||| || || || | |||||| | || ||||| | ||||| |||||| || Sbjct 238988 TCACTGGCGAG-CCTACCTTTGGCAAGCTGACCTCCATGCACTTTTACGCCTGGAAAAAG 239046 Query 76904 GGGCTCAAAACCGGAATGTACTATCTCCGATCA 76936 || ||||| ||||| |||||||| || |||||| Sbjct 239047 GGCCTCAAGACCGGCATGTACTACCTACGATCA 239079 >seq34 Length=381833 Score = 82.4 bits (90), Expect = 9e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 |||||| || || ||| | | || ||||| ||| || ||||| |||||||| || | Sbjct 50099 CTCCTTTGCTGAACGCTTGGTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCGGGCGC 50040 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 || | | || | ||||||||||||||||| | ||||| || | |||||| || Sbjct 50039 CTTTGCCTCCATCTTCTGGTTGAAGAAGCGGGGCTTGATGCCTGGTTTGACCTTCTCCAA 49980 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 ||||| |||| ||| || || || |||||| || |||||| Sbjct 49979 CGAACTGATTTGCCGCGACGAAGGCCTCCACACCGACTTTGCC 49937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568749888320