Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq21 149 6e-31 seq71 134 1e-26 seq27 131 2e-25 seq77 95.1 1e-14 >seq21 Length=571097 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || || ||||| ||||| ||||||||||| Sbjct 539871 CCACCACGGAGACGGAGCACAAGGTGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAG 539930 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| ||||| || | ||| || || || || || Sbjct 539931 AGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGGG 539990 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| |||||||| ||||| ||||| ||| | || ||| || ||||| || Sbjct 539991 ATGCCTTCTTTGTCTTGAATCTTTTGCTTGACGTTGTCAATTGAGTCCGAGGATTCAACT 540050 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||||| || || || || | || || ||||| |||||||| Sbjct 540051 TCGAGAGTAATAGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 540097 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || || ||||| ||||| ||||||||||| Sbjct 539643 CCACCACGGAGACGGAGCACAAGGTGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAG 539702 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| ||||| || | ||| || || || || || Sbjct 539703 AGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGGG 539762 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| ||||| || ||||| ||||| || | | ||| || ||||| || Sbjct 539763 ATGCCTTCTTTGTCTTGGATCTTTTGCTTGACGTTATCAATAGAGTCCGAGGATTCAACT 539822 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||||| || || || || | || || || || |||||||| Sbjct 539823 TCGAGAGTAATAGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 539869 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 |||||||| || || ||||||||||| | ||| | || |||||||| ||||| Sbjct 539445 GTGGATTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCGAGCTGCTTGCCA 539504 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 ||||| || | ||| || || || || || ||||||||||| ||||| || ||||| ||| Sbjct 539505 GCAAAGATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTGGATCTTTTGCTTG 539564 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || ||| | || ||| || ||||| || ||||||||||| || || || || | || Sbjct 539565 ACGTTGTCAATTGAGTCCGAGGATTCAACTTCGAGAGTAATAGTCTTGCCAGTCAGGGTC 539624 Query 134697 TTAACGAAAATTTGCAT 134713 || || || |||||||| Sbjct 539625 TTGACAAAGATTTGCAT 539641 >seq71 Length=978913 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || || ||||||||||| ||||||||||| Sbjct 433289 CCACCACGGAGACGGAGCACAAGGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAG 433230 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| ||||| || | || || || || || || Sbjct 433229 AGAGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGGCGTTGTTGGTCAGGGGGG 433170 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || ||||| ||||| ||| | | ||| || ||||| || Sbjct 433169 ATACCTTCCTTGTCTTGGATCTTTTGCTTGACGTTGTCAATAGAGTCCGAGGATTCAACT 433110 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||||||||| || || || ||||| || || || |||||||| Sbjct 433109 TCGAGAGTAATGGTCTTGCCAGTCAAAGTCTTTACAAAGATTTGCAT 433063 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| || | ||| | |||||||||||||| ||||||||||| Sbjct 433061 CCACCGCGGAGACGCAGAACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAG 433002 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| ||||| || | || || || || || || Sbjct 433001 AGAGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGGCGTTGTTGGTCAGGGGGG 432942 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || ||||| ||||| ||| | | ||| || ||||| || Sbjct 432941 ATACCTTCCTTGTCTTGGATCTTTTGCTTGACGTTGTCAATAGAGTCCGAGGATTCAACT 432882 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||||||||| || || || ||||| || || || |||||||| Sbjct 432881 TCGAGAGTAATGGTCTTGCCAGTCAAAGTCTTTACAAAGATTTGCAT 432835 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| || | ||| | |||||||||||||| ||||||||||| Sbjct 432833 CCACCGCGGAGACGCAGAACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAG 432774 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || || || ||||| ||||| || | ||| || || || || || Sbjct 432773 AGAGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGAGGG 432714 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| |||||||| ||||| ||||| || | | ||| || ||||| || Sbjct 432713 ATACCTTCTTTATCTTGAATCTTTTGCTTGACGTTATCAATAGAGTCCGAGGATTCGACT 432654 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || | ||| || |||||||||||||| Sbjct 432653 TCCAAGGTGATGGTCTTGCCAGTAAGAGTCTTGACGAAAATTTGCAT 432607 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| || | ||| | |||||||||||||| ||||||||||| Sbjct 433517 CCACCGCGGAGACGCAGAACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAG 433458 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || || || ||||| ||||| || | || || || || || || Sbjct 433457 AGAGTACGGCCATCTTCAAGTTGCTTGCCAGCAAAGATAAGGCGTTGTTGGTCAGGGGGG 433398 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || ||||| ||||| ||| | | ||| || ||||| || Sbjct 433397 ATACCTTCCTTGTCTTGGATCTTTTGCTTGACGTTGTCAATAGAGTCCGAGGATTCGACT 433338 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||||| || || || || || || || || || |||||||| Sbjct 433337 TCGAGAGTAATAGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 433291 >seq27 Length=1513655 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || || || || |||||||| ||||||||||||||||| Sbjct 1427426 CCACCACGGAGACGAAGGACAAGATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAT 1427485 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || || || ||||| |||||||||||||| || ||||| || || Sbjct 1427486 AGGGTACGGCCATCCTCCAGTTGCTTGCCGGCAAAAATCAAACGTTGTTGATCAGGAGGA 1427545 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || |||||||| || || ||||| || | | || || || || || Sbjct 1427546 ATGCCTTCCTTGTCTTGAATCTTCTGCTTGACATGCTCAATGGCATCCGAGGACTCGACT 1427605 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||| ||||| || || |||||||| || || |||||||| Sbjct 1427606 TCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATTTGCAT 1427652 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||| | ||| | |||||||||||||| |||||||||||| Sbjct 550395 CCACCACGGAGACGCAGCACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 550336 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || ||| || | || || || ||||| |||| ||| || || || || || Sbjct 550335 AAGGTGCGACCGTCTTCCAATTGCTTACCAGCAAAGATCAGACGTTGTTGGTCAGGAGGA 550276 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 || |||||||| |||||||| ||||| ||||| Sbjct 550275 ATACCTTCTTTGTCTTGAATCTTTTGCTTGAC 550244 >seq77 Length=46662 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 |||||||||||||| |||||||| ||| || || || || || | || || || Sbjct 33826 GTGGATTCCTTTTGGATGTTGTAATCGGAAAGAGTACGACCATCTTCCAATTGCTTACCA 33767 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 ||||||||||| || ||||| || || || || |||||||| |||||||| ||||| ||| Sbjct 33766 GCAAAAATCAAGCGTTGCTGGTCAGGAGGAATACCTTCTTTGTCTTGAATCTTTTGCTTG 33707 Query 134637 AC 134638 || Sbjct 33706 AC 33705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397679807280