Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq56 111 2e-19 >seq56 Length=149020 Score = 111 bits (122), Expect = 2e-19 Identities = 264/394 (67%), Gaps = 4/394 (1%) Strand=Plus/Minus Query 7238 TACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAACGAGGAG 7297 ||||||||||| || || || ||| ||||| || |||||||| ||||| || Sbjct 79083 TACCAAGCCTCTACCTCTGAATTGTACGGTAAGGTGGTGGAAACTCCTCAAAAGGAAACC 79024 Query 7298 ACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATTGGCTCGT 7356 || ||||||||||| || || ||| || || | ||| | | ||| | ||| |||| Sbjct 79023 ACTCCCTTCTACCCTCGTTCTCCCTATGGTGTGGCCAAGCTGTACGGTT-ACTGGATCGT 78965 Query 7357 CAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATGA 7416 || ||||| || || ||| ||||||| || ||| || || |||||||| || Sbjct 78964 TGTCAACTACCGTGAATCCTACAACATGTTTGCCTGTAACGGTATTCTGTTCAACCACGA 78905 Query 7417 ATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTACCGAGGGTATCAAACAAAT 7476 ||| || | || || ||||||||| ||||| ||| | || | || Sbjct 78904 ATCTCCCCGCCGTGGCCGTACCTTTGTCACCCGCAAGATCACCCGTGCCGTCGCTGACAT 78845 Query 7477 C-ATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGAGATTGGG 7535 | || || | ||| | | | | | ||||||||||| | || | | ||||||| Sbjct 78844 CCATTTGGGCCGTCAAGAA-TGCTTGTACTTGGGTAACATCGATGCCAAGCGTGATTGGG 78786 Query 7536 GTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCGACG 7595 |||| || |||||||| |||| ||||||| | ||| | |||||||| |||||||| | Sbjct 78785 GTCATGCCCGTGACTATGTCGAAGGTATGTGGTTGATGTTGCAACAAGAAGAAGCCGATG 78726 Query 7596 AATATGTAGTAGCAACGGGTGAGACCCATACAGT 7629 | | ||| | || || ||||| ||||| || || Sbjct 78725 ACTTTGTCTTGGCCACCGGTGAAACCCACACTGT 78692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259968853360