Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq21 84.2 2e-11 >seq21 Length=571097 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| |||||| || |||||||| || || ||||| || | | ||| | |||||| Sbjct 539433 ACCAAGTGCAAGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCG 539492 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 | || ||||| ||| | || || | ||||||||| || | |||||||||||| Sbjct 539493 AGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTGG 539552 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 || ||||| || || | | | | | || | ||| ||||| |||||||| ||| Sbjct 539553 ATCTTTTGCTTGACGTTGTCAATTGAGTCCGAGGATTCAACTTCGAGAGTAATAGTCTTG 539612 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || |||| || || | ||| |||||||| Sbjct 539613 CCAGTCAGGGTCTTGACAAAGATTTGCAT 539641 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||| | ||| | ||| ||||||||||| || ||||| || | | ||| | |||||| Sbjct 539888 CACAAGGTGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTC 539947 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148 | || ||||| ||| | || || | ||||||||| || | |||||||||||| Sbjct 539948 GAGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTG 540007 Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTT 101208 ||| ||||| || || | | | | | || | ||| ||||| |||||||| || Sbjct 540008 AATCTTTTGCTTGACGTTGTCAATTGAGTCCGAGGATTCAACTTCGAGAGTAATAGTCTT 540067 Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCATTAT 101241 ||| |||| || || | || |||||||| || Sbjct 540068 GCCAGTCAGGGTCTTGACGAAGATTTGCATGAT 540100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409660230827526