Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq34 122 7e-23 >seq34 Length=381833 Score = 122 bits (134), Expect = 7e-23 Identities = 296/443 (67%), Gaps = 4/443 (1%) Strand=Plus/Plus Query 4259 TTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTC 4318 ||| || || || || |||||||| ||||| || || ||||||| | ||||| | || Sbjct 49646 TTGATAATCAGACACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAAATCATGTC 49705 Query 4319 CATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAA 4378 |||||| ||||| || || | | ||||| ||||| | || || |||| Sbjct 49706 CATAAAGTCAAAGGGGTTGATGGATTTGTACACCTTTTCTTGGCCCAAGGCGACCAGCAG 49765 Query 4379 TCGGTCAGCTACAAATTCTATATACTGGCTCATGAGT-TCGCAGTTAATTCCAATTAATC 4437 |||||||| || ||||| || || |||| ||| | | ||| || || ||||| || Sbjct 49766 ACGGTCAGCAACGAATTCAATGTATTGGCACATCAACGTGGCA-TTCATGCCAATCAAGG 49824 Query 4438 TCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATAT 4497 ||||| | || | || || || |||||||| || | |||||||| || || | Sbjct 49825 CGACAGGCAAGGCATCGGTTAAGAATTCTTGTTCGATCTTGACGGCTTCGACAATGATTT 49884 Query 4498 CTTTTATTTTATCTTTAGATGGTTTATTTACTAA-GTATCCAAACAATAAACACGCAAAA 4556 | | || || || ||| || ||| | || | |||| | ||| ||||| Sbjct 49885 CCGTGATACGTTCGG-AGCTGGGTTGCTTATGGATGTGGCTGAACAGCAGACAGGCAAAG 49943 Query 4557 TCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATT 4616 || || | |||||||| | || |||||||||||| || || || || || ||||| Sbjct 49944 TCGGTGTGGAGGCCTTCGTCGCGGCAAATCAGTTCGTTGGAGAAGGTCAAACCAGGCATC 50003 Query 4617 AAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCT 4676 || || | ||| || | ||| || || | |||||| | || || ||||| || ||||| Sbjct 50004 AAGCCCCGCTTCTTCAACCAGAAGATGGAGGCAAAGGCGCCCGAGAAGAAAATACCTTCG 50063 Query 4677 ACGGCGGCAAACGCTACTAATCG 4699 || || ||||| || || || || Sbjct 50064 ACAGCAGCAAAGGCCACCAAGCG 50086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049006667962