Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq38 183 4e-41 >seq38 Length=1275103 Score = 183 bits (202), Expect = 4e-41 Identities = 699/1092 (64%), Gaps = 14/1092 (1%) Strand=Plus/Plus Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792 || |||||||| || ||||| || ||||| ||||| || |||||||||||| || Sbjct 988738 ATTTCGGTACACAGGTTACTGCACTTGATGGTGCCGAGGTTTTGTTGGTTGGATTTGCGG 988797 Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATA 77852 ||||| | || ||||| || ||||| || | |||||||| | || | ||| || || Sbjct 988798 TTGCAGGCATCTTTATACAGCATAAAGGGGTTGCCGGTTTCGGTTTGGGCTTCCATGATG 988857 Query 77853 GATTTCCAGACGACTCTAGCTTTTATCATA-GATTTGTATCGCCTCTCTCTTTCATATTG 77911 | | ||| | | || || ||| | | | | |||| ||| ||| || | Sbjct 988858 GCGTACCACAGCTTTTGGGCCTTGATCGTTTGGCGAGCACGGCCT-TCTTGTTCGTAGCG 988916 Query 77912 AGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGG 77971 | ||| ||| ||| |||||||| ||||| || || | || |||||| ||| || || Sbjct 988917 GGCATACAGCTCTTCGAATTCATCGCCCCATACTTCGTGCAGACCAGGGGCTTCGTTGGG 988976 Query 77972 GCACATCAATGACCAGTCACCAT---CTTCCTTAACTCGTTTCATAAAGAGATCAGGTAT 78028 || | || ||||| || || | ||||| || || ||||| ||||||||||| | Sbjct 988977 ACAGAACAGCGACCACTCGCCGTTGGCTTCC---ACACGCTTCATGAAGAGATCAGGCAC 989033 Query 78029 CCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAG 78088 ||| || ||| || ||||| |||| | ||| || || || ||||| ||| Sbjct 989034 CCACAGCGCATAGAACAGATCACGGGCACGGATTTCGTCCTTGCCGACGTTCTTGCGAAG 989093 Query 78089 ATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGG 78148 || | ||| | | ||| | ||||| ||||| || || || || | | | || || Sbjct 989094 GTCCAAAAAGGTGAAGACATCGGCGTGCCAAGGTTCCAGGTACATGGCAAAAGCACCGGG 989153 Query 78149 TCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG 78208 || || || || || ||||| | || | ||| ||||| || | |||| | ||| || Sbjct 989154 ACGCTTGTTGCCACCTTGATCGACGTAGCGGGCAGTGTTGTTGAAGACTCGGAGCATGGG 989213 Query 78209 AATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATT 78268 | | |||||| || || || || |||| ||| ||| ||| | || || || || Sbjct 989214 CAGGAGACCGTTGGAGTAGCCGTTGGTGCCAGCAATGTAAGAGCCAGTGGCACGGATGTT 989273 Query 78269 ACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGT 78328 ||| | || || || || || |||| || ||| | || ||| || | || Sbjct 989274 GTGGATGTTGAGACCAATGCCGCCAGCGGTCTTGGAGATTTGGGCACAAGACTTGAGGGT 989333 Query 78329 ATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 78388 |||||||| || || || ||| ||| ||||| | | || || || |||||||| Sbjct 989334 TTCGTAGATGCCTTCGATCGAGTCTTCCTTCATGGTCAAGAGGAAGCACGAGGACATTTG 989393 Query 78389 ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA 78448 | || || || || || || || | || || ||||| || || | || || Sbjct 989394 AGGACGAGGCGTGCCGGCGTTGAAGAGCGTAGGGCTGGCATGGGTGAAGAAGCGCTCGGA 989453 Query 78449 AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTAC 78508 | | | ||| ||||| | ||| | || ||||| ||||| || || || || Sbjct 989454 CATCAATTGGTAGGTTTCCAAAGCAGCATCGATGTCGTCGCCGTGAATCCCGACGGCCAC 989513 Query 78509 ACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGA 78568 |||||| | || || ||||| | ||| || || ||| || || | ||| || || Sbjct 989514 ACGCATGATCAAGTGTTGAGGACGCTCAGCCACTTTCCCATTGATCTTGAGCAAATAAGA 989573 Query 78569 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAAC 78628 ||||| |||||| || ||||| |||||||| ||| || | || || || || | Sbjct 989574 CCGTTCCAGAGTTTTGAAGCCAAAGTAGTTGTAGCCAAAATCGCGGTCATAGATGATGGC 989633 Query 78629 AGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGT---TGAAATAAT 78685 ||||| || ||| || ||| | |||| | | ||| || || || || Sbjct 989634 TGAATTGAGACGATCGGCGTTCTTGATGACAA---CTTGGTAAGTGGTGTCCGAGATCAT 989690 Query 78686 AGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACT 78745 || || || || | || || || | |||| || | || ||||| | || | Sbjct 989691 GGGCGAGTGTTTGCCCGTCTTGGGGTTGATATAGGTATACAAGTCTTCGACGACTTGCGA 989750 Query 78746 AAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGC 78805 || | ||||| ||||| ||||| || || || | ||| || | ||||| | ||||| Sbjct 989751 GAACACCTTTTTGGTTTCTTTGTGCAGGTTGGAGATAGCAATACGGGCAGCCAAGATAGC 989810 Query 78806 ATAATCAGGATG 78817 ||| |||||||| Sbjct 989811 ATAGTCAGGATG 989822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667810096960