Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq38 172 8e-38 >seq38 Length=1275103 Score = 172 bits (190), Expect = 8e-38 Identities = 783/1228 (64%), Gaps = 20/1228 (2%) Strand=Plus/Plus Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTAT 76329 |||||| ||| || || || || ||||| | |||| || ||| || | | || Sbjct 988680 AAGAGCGATACTGGCCAGGTTGCACACGGCGATTTCATCAGGGCTGGAGTACTCGACAAT 988739 Query 76330 CTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTT 76389 || || || || ||||| |||||||| || || || |||||||||||| || ||| Sbjct 988740 TTCGGTACACAGGTTACTGCACTTGATGGTGCCGAGGTTTTGTTGGTTGGATTTGCGGTT 988799 Query 76390 ACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGA 76449 || | || ||||| || | ||| || | || ||||| | || | ||| || || | Sbjct 988800 GCAGGCATCTTTATACAGCATAAAGGGGTTGCCGGTTTCGGTTTGGGCTTCCATGATGGC 988859 Query 76450 TTTCCAGACGACTCTAGCTTTTATTATA-GATTTGTATCGCTTCTCTCTTTCATATTGTG 76508 | ||| | | || || || | | | | || | ||| ||| || | | Sbjct 988860 GTACCACAGCTTTTGGGCCTTGATCGTTTGGCGAGCACGGCCT-TCTTGTTCGTAGCGGG 988918 Query 76509 TATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGAC 76568 ||| | | ||| |||||||| ||||| || || | || |||||| ||| || |||| Sbjct 988919 CATACAGCTCTTCGAATTCATCGCCCCATACTTCGTGCAGACCAGGGGCTTCGTTGGGAC 988978 Query 76569 ACATCAATGACCACTCACCAT---CTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCC 76625 | | || |||||||| || | ||||| || || ||||| ||||||||||| | || Sbjct 988979 AGAACAGCGACCACTCGCCGTTGGCTTCC---ACACGCTTCATGAAGAGATCAGGCACCC 989035 Query 76626 ATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGAT 76685 | || ||| || ||||| |||| | ||| || || || ||||| ||| | Sbjct 989036 ACAGCGCATAGAACAGATCACGGGCACGGATTTCGTCCTTGCCGACGTTCTTGCGAAGGT 989095 Query 76686 CTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTC 76745 | | || | | ||| | ||||| ||||| || || || || | | |||| || | Sbjct 989096 CCAAAAAGGTGAAGACATCGGCGTGCCAAGGTTCCAGGTACATGGCAAAAGCACCGGGAC 989155 Query 76746 GTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAA 76805 | || || || || ||||| | || | ||||||||| || | |||| | ||| || | Sbjct 989156 GCTTGTTGCCACCTTGATCGACGTAGCGGGCAGTGTTGTTGAAGACTCGGAGCATGGGCA 989215 Query 76806 TAATGCCGTTAGATGTA-CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTA 76864 | ||||| || ||| || || || |||| ||| ||| ||| ||||| || || Sbjct 989216 GGAGACCGTTGGA-GTAGCCGTTGGTGCCAGCAATGTAAGAGCCAGTGGCACGGATGTTG 989274 Query 76865 CTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTG 76924 || || || || || || || | || |||||| | ||||| || | || Sbjct 989275 TGGATGTTGAGACCAATGCCGCCAGCGGTCTTGGAGATTTGGGCACAAGACTTGAGGGTT 989334 Query 76925 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGA 76984 || |||||||| || || || ||| ||||| | | || || || ||||||||| Sbjct 989335 TCGTAGATGCCTTCGATCGAGTCTTCCTTCATGGTCAAGAGGAAGCACGAGGACATTTGA 989394 Query 76985 TGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAA 77044 || || || || || || || | ||||| ||||| ||||| | || || Sbjct 989395 GGACGAGGCGTGCCGGCGTTGAAGAGCGTAGGGCTGGCATGGGTGAAGAAGCGCTCGGAC 989454 Query 77045 AGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACA 77104 | | | ||| ||||| | | | || || || || ||||| || || || ||| Sbjct 989455 ATCAATTGGTAGGTTTCCAAAGCAGCATCGATGTCGTCGCCGTGAATCCCGACGGCCACA 989514 Query 77105 CGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGAT 77164 ||||| | || || ||||| || || | || ||| || || | ||| || || Sbjct 989515 CGCATGATCAAGTGTTGAGGACGCTCAGCCACTTTCCCATTGATCTTGAGCAAATAAGAC 989574 Query 77165 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACC 77224 ||||| |||||| || ||||| |||||||| ||| || | || || || || | Sbjct 989575 CGTTCCAGAGTTTTGAAGCCAAAGTAGTTGTAGCCAAAATCGCGGTCATAGATGATGGCT 989634 Query 77225 GAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACAGTGGT---AGAAATAATT 77281 ||||| || || | ||| | |||| | | |||||| || || || Sbjct 989635 GAATTGAGACGATCGGCGTTCTTGATGACAA---CTTGGTAAGTGGTGTCCGAGATCATG 989691 Query 77282 GGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTA 77341 || || || | || | || || || | |||| || | |||||||| | || | || | Sbjct 989692 GGCGAGTGTTTGCCCGTCTTGGGGTTGATATAGGTATACAAGTCTTCGACGAC-TTGCGA 989750 Query 77342 -AATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGC 77400 || | ||||| ||||| ||||| || || || | || || | ||||| | || || Sbjct 989751 GAACACCTTTTTGGTTTCTTTGTGCAGGTTGGAGATAGCAATACGGGCAGCCAAGATAGC 989810 Query 77401 ATAGTCAGGATGTTGTGTAGTGCAGGT-GGCTGCTATTTCTGCCGCTAAAGTATCTAATT 77459 |||||||||||| ||| | || || || || |||| || || | | | || |||| Sbjct 989811 ATAGTCAGGATG-GGTGGTGGTCATGTAAGCAGCCGTTTCAGCAGCAAGATTGTCCAATT 989869 Query 77460 CTATAGTAGTAACTCCGTTATATAGCCC 77487 | | ||| || || || | ||| | ||| Sbjct 989870 CCACAGTGGTCACACCTTGATACACCCC 989897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933384068480