Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq34 89.7 5e-13 >seq34 Length=381833 Score = 89.7 bits (98), Expect = 5e-13 Identities = 178/257 (69%), Gaps = 9/257 (4%) Strand=Plus/Plus Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 ||||| |||||||| || | ||| || |||| | || ||||||||||| || || Sbjct 50253 ATATAGGTATCAATCAGCAGACTGTAAGTTTCGGCGTGGATATTTTCAATCATGATTTGG 50312 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAAT-TGAACATCATTAAAAAATCTTTTAGCTAA 23897 || ||||| ||||| | ||||| | |||| | || || | | ||| ||| | || Sbjct 50313 AAACCATAGAAACACTTGGCTTC-GGCAATCTTGACTTCGTCCATAAAGTTTTGCACCAA 50371 Query 23898 ATTTTCGTTAACAATACCATCACTAGC-AGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956 ||||| || |||||||| || | ||| |||||||| ||||| | || ||||| | Sbjct 50372 GTTTTCATTGACAATACCGTC-CGAGCTGGCAAAGAAGGCAAGGATATGCGAGATAAAGT 50430 Query 23957 GTCTTTCATCAGTTGATAAT----TTTTTCCAATCATTAATATCTTTTGATAAATCAACT 24012 | |||||| ||| | || |||| ||||||| || ||| || || | ||||| | Sbjct 50431 ACCGTTCATC-CTTGGTCATCTTGTTTTCCCAATCACCAAGATCCTTGGAGAGATCAATT 50489 Query 24013 TCATCAACTGTCCAAAA 24029 || ||| | ||||| || Sbjct 50490 TCTTCAGCAGTCCAGAA 50506 Score = 86.0 bits (94), Expect = 7e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 |||| | ||| ||||| || || |||||||| || | | ||||| ||| || || Sbjct 49926 AACAGCAGACAGGCAAAGTCGGTGTGGAGGCCTTCGTCGCGGCAAATCAGTTCGTTGGAG 49985 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || || || || ||||| || || || || || | ||| || || | ||||| | || Sbjct 49986 AAGGTCAAACCAGGCATCAAGCCCCGCTTCTTCAACCAGAAGATGGAGGCAAAGGCGCCC 50045 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCAC 23654 || ||||||||||| || ||||| ||||||||||| Sbjct 50046 GAGAAGAAAATACCTTCGACAGCAGCAAAGGCCAC 50080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487256879600