Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq21 120 2e-22 seq27 114 9e-21 seq71 113 3e-20 >seq21 Length=571097 Score = 120 bits (132), Expect = 2e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || || |||||||||||||| || | ||| ||| | || || Sbjct 539888 CACAAGGTGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTC 539947 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || |||||||| | ||| || || || | ||| | ||||| || || Sbjct 539948 GAGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTG 540007 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | | || | ||| | |||||| || || | ||||| ||||| Sbjct 540008 AATCTTTTGCTTGACGTTGTCAATTGAGTCCGAGGATTCAACTTCGAGAGTAATAGTCTT 540067 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || |||||||| |||||||||||||||||| Sbjct 540068 GCCAGTCAGGGTCTTGACGAAGATTTGCATGATG 540101 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || || |||||||||||||| || | ||| ||| | || || Sbjct 539660 CACAAGGTGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTC 539719 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || |||||||| | ||| || || || | ||| | ||||| || || Sbjct 539720 GAGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTG 539779 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | | || | ||| | |||||| || || | ||||| ||||| Sbjct 539780 GATCTTTTGCTTGACGTTATCAATAGAGTCCGAGGATTCAACTTCGAGAGTAATAGTCTT 539839 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| || ||||||||||| Sbjct 539840 GCCAGTCAGGGTCTTGACAAAGATTTGCAT 539869 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| | ||| || || ||||||||||| || | ||| ||| | || || Sbjct 539433 ACCAAGTGCAAGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCG 539492 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | ||| || || || | ||| | ||||| || || Sbjct 539493 AGCTGCTTGCCAGCAAAGATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTGG 539552 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | | || | ||| | |||||| || || | ||||| ||||| Sbjct 539553 ATCTTTTGCTTGACGTTGTCAATTGAGTCCGAGGATTCAACTTCGAGAGTAATAGTCTTG 539612 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| || ||||||||||| Sbjct 539613 CCAGTCAGGGTCTTGACAAAGATTTGCAT 539641 >seq27 Length=1513655 Score = 114 bits (126), Expect = 9e-21 Identities = 156/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| || ||||| |||||||| || | || || | || ||| Sbjct 1427444 ACAAGATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCTGATAGGGTACGGCCATCCTCC 1427503 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| |||||||| |||||||| || ||||| | ||| | |||||||| || Sbjct 1427504 AGTTGCTTGCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCTTGA 1427563 Query 44249 ATCTTCTGCTTCA-ATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||||||||| | ||| | | |||| || | ||| || || |||| ||||| || || Sbjct 1427564 ATCTTCTGCTTGACATGCT-CAATGGCATCCGAGGACTCGACTTCCAATGTAATAGTTTT 1427622 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATGT 44342 ||| || | || || || |||||||||||||||| Sbjct 1427623 TCCAGTCAAAGTTTTGACAAAGATTTGCATGATGT 1427657 >seq71 Length=978913 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| | ||| ||||||||||||||||| || | ||| || | || || Sbjct 432815 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCTTCA 432756 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||||||||| | ||| || || || | ||| | |||||| || || Sbjct 432755 AGTTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACCTTCTTTATCTTGA 432696 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | | || | ||| | |||||| || |||| || || ||||| Sbjct 432695 ATCTTTTGCTTGACGTTATCAATAGAGTCCGAGGATTCGACTTCCAAGGTGATGGTCTTG 432636 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 || || || ||||| ||||| ||||||||||| Sbjct 432635 CCAGTAAGAGTCTTGACGAAAATTTGCATGAT 432604 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || ||||||||||||||||| || | ||| ||| | || || Sbjct 433272 CACAAGGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTC 433213 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || |||||||| | || || || || | || | ||||||||| || Sbjct 433212 AAGCTGCTTGCCAGCAAAGATAAGGCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTG 433153 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | | || | ||| | |||||| || || | ||||| ||||| Sbjct 433152 GATCTTTTGCTTGACGTTGTCAATAGAGTCCGAGGATTCAACTTCGAGAGTAATGGTCTT 433093 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| || ||||||||||| Sbjct 433092 GCCAGTCAAAGTCTTTACAAAGATTTGCAT 433063 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| | ||| ||||||||||||||||| || | ||| ||| | || || Sbjct 433043 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCA 432984 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | || || || || | || | ||||||||| || Sbjct 432983 AGCTGCTTGCCAGCAAAGATAAGGCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGG 432924 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | | || | ||| | |||||| || || | ||||| ||||| Sbjct 432923 ATCTTTTGCTTGACGTTGTCAATAGAGTCCGAGGATTCAACTTCGAGAGTAATGGTCTTG 432864 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| || ||||||||||| Sbjct 432863 CCAGTCAAAGTCTTTACAAAGATTTGCAT 432835 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| | ||| ||||||||||||||||| || | ||| || | || || Sbjct 433499 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCTTCA 433440 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || |||||||| | || || || || | || | ||||||||| || Sbjct 433439 AGTTGCTTGCCAGCAAAGATAAGGCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGG 433380 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | | || | ||| | |||||| || || | ||||| ||||| Sbjct 433379 ATCTTTTGCTTGACGTTGTCAATAGAGTCCGAGGATTCGACTTCGAGAGTAATAGTCTTG 433320 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||| || ||||||||||| Sbjct 433319 CCAGTCAAGGTCTTGACAAAGATTTGCAT 433291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989899838338