Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq217 482 2e-131 seq2 167 2e-36 seq153 158 1e-33 seq151 154 2e-32 seq155 147 2e-30 seq1 147 2e-30 seq79 98.7 1e-15 >seq217 Length=908848 Score = 482 bits (534), Expect = 2e-131 Identities = 626/859 (73%), Gaps = 7/859 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| | ||||| ||||| ||| ||||| || ||||| || | |||| || Sbjct 400677 GAGCCCATCCTGCGTCCCAACCCGGACCGCTTCGTCATGTTCCCGATCAAGTACCACGAG 400618 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| |||||||| ||| |||||||||||||||||| | |||||| | |||||| Sbjct 400617 ATCTGGGAGATGTACAAGAAGCACGAGGCGTCGTTCTGGACGGCCGAGGAAATCGACCTG 400558 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| | || ||||||| ||| |||||||||||||||| || || |||||| Sbjct 400557 TCGCAGGACATGGGCCACTGGGACAACCGCCTGAACGACAACGAGCGTCACTTTATCAAG 400498 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG- 116811 ||||||| || || || || ||| |||||||||||||||||||| ||||| || Sbjct 400497 TACGTGCTCGCGTTCTTTGCTGCCTCGGACGGCATCGTCAACGAGAACCTGGTGCAGAAC 400438 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | |||| ||| | |||||||||||| ||||||||||| ||||| || Sbjct 400437 TTTAGCACCG-AGGTTCAGATCCCCGAGGCGCGGTCGTTCTACGGCTTCCAGATGATGAT 400379 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 |||||| | |||||||| | ||| ||| ||||| ||||||||| | ||| | | Sbjct 400378 TGAGAACATCCACTCGGAGACGTACTCGCTGCTCATTGACACGTACATCCGCGACCCCAA 400319 Query 116932 GGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGA 116991 |||| | |||||| |||| ||||| | || |||||| || |||||||||| Sbjct 400318 GGAGCGCGACTTTTTGTTCCACGCTATCGACAACATCCCGTGCATCCGCAAGAAGGCCGA 400259 Query 116992 GTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTT 117051 |||||||| |||||||||| | | |||||| ||||||| ||||||||||||||| Sbjct 400258 CTGGGCGCTTCGCTGGATCGATAACCGCGAGGCCAAGTTCGGCGTGCGCCTGGTGGCCTT 400199 Query 117052 CGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAA 117111 ||||| ||||||||| ||||||| |||||| || || | || || ||||||||||| Sbjct 400198 TGCGGCGGTCGAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCGATCTTCTGGCTCAAGAA 400139 Query 117112 ACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCT 117171 |||||||| ||||| || ||||| ||| |||||||| |||| | | |||||||| || Sbjct 400138 GCGCGGCCTGATGCCTGGACTGACCTTCTCGAACGAGCTGATCTGCCGCGACGAGGGCCT 400079 Query 117172 GCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCG 117231 ||| ||||||||||| |||||||| | || || | | ||| ||| | | Sbjct 400078 GCACACGGACTTTGCCTGCGTGCTGTTCCACCACCTGCAGTCCCCGCCGGCCGCCGAGGT 400019 Query 117232 CGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCT 117291 | || ||||| ||||||| || ||| ||||||||||| ||||| |||| ||||| Sbjct 400018 CATCCTCCAGATCATCACCGAGGCTGTCACCATCGAGCAGGAGTTCCTGTCCGAGGCGCT 399959 Query 117292 GCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCG 117350 ||| ||| ||| | || | || || || | |||| || || |||||||| || | Sbjct 399958 GCCCGTGTCACTGATCGGCATGAA-CGCCAAGCTCATGTGCCAGTATATCGAGTTTGTTG 399900 Query 117351 CCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGG 117410 | ||| | |||||| ||| |||| | ||||||||||| | ||||||| | | Sbjct 399899 CTGACCGCCTGCTGGTCGCTCTGGGCCAGCCCAAGCACTACCTGGCCACCAACCCCTTCG 399840 Query 117411 ACTTTATGAACCTCATCTC 117429 |||| ||| || | ||||| Sbjct 399839 ACTTCATGGACATGATCTC 399821 >seq2 Length=801100 Score = 167 bits (184), Expect = 2e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || |||||| |||| || || | | Sbjct 378501 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 378560 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| | || |||| ||||| ||||||||||| | ||||| Sbjct 378561 GACACCATCGACAACG-TCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCA 378619 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||||||| |||||||| Sbjct 378620 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAA 378679 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | || ||||| || ||| | ||| || | |||||| Sbjct 378680 CATCCAGAAGGAGTCGACTCTGCACCTGGTGCTCCGCCTGCGCGGCGGC 378728 Score = 161 bits (178), Expect = 1e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| |||| || || | | Sbjct 378273 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCG 378332 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| | || |||| ||||| ||||||||||| | ||||| Sbjct 378333 GACACCATCGACAACG-TCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCA 378391 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||||||| |||||||| Sbjct 378392 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAA 378451 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | || ||||| | ||| | ||| || | || || Sbjct 378452 CATCCAGAAGGAGTCGACTCTGCACTTGGTGCTTCGCCTGCGCGGTGG 378499 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| || |||||| |||| || || | | Sbjct 378045 ATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 378104 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| | || |||| ||||| ||||||||||| | ||||| Sbjct 378105 GACACCATCGACAACG-TCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCA 378163 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||||||| |||||||| Sbjct 378164 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAA 378223 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | || ||||| | ||| | ||| || | || || Sbjct 378224 CATCCAGAAGGAGTCGACTCTGCACTTGGTGCTTCGCCTGCGCGGTGG 378271 >seq153 Length=77323 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || |||||| |||| || || | | Sbjct 48508 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 48567 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| | || |||| ||||| || |||||||| | ||||| Sbjct 48568 GACACCATTGACAACG-TCAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCA 48626 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||| ||| |||||||| Sbjct 48627 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCGGACTACAA 48686 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | || ||||| || ||| | ||| || | |||||| Sbjct 48687 CATCCAGAAGGAGTCGACTCTGCACCTGGTGCTTCGCCTGCGCGGCGGC 48735 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || |||||| |||| || || | | Sbjct 48280 ATGCAGATTTTCGTGAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 48339 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| | || |||| ||||| || |||||||| | ||||| Sbjct 48340 GATACCATCGACAACG-TCAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCA 48398 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||||||| |||||||| Sbjct 48399 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAA 48458 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | || ||||| || ||| | ||| || | || || Sbjct 48459 CATCCAGAAGGAGTCGACTCTGCACCTGGTGCTCCGCCTGCGCGGTGG 48506 Score = 145 bits (160), Expect = 8e-30 Identities = 177/239 (74%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 40679 CGCTCCGAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACG 40738 ||||| | | ||||| || || || || || ||||| ||||| || |||||| | || | Sbjct 48041 CGCTCTGTATCATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACTATCACCCTTGAGG 48100 Query 40739 TCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATC 40797 | || | | |||| | | | |||| ||||| | || |||| ||||| || |||||| Sbjct 48101 TGGAGTCGTCGGACACCATCGACAACG-TCAAGCAGAAGATTCAGGACAAGGAAGGCATC 48159 Query 40798 CCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTC 40857 || | |||||||| || ||||||| ||| ||||| ||||| || || | ||||||||| Sbjct 48160 CCGCCTGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTC 48219 Query 40858 AACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||||||||| | || ||||| || ||| | ||| || | || || Sbjct 48220 TCGGACTACAACATCCAGAAGGAGTCGACTCTGCACCTGGTGCTCCGCCTGCGCGGTGG 48278 >seq151 Length=1709611 Score = 154 bits (170), Expect = 2e-32 Identities = 175/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||||||| | || || || | | Sbjct 449558 ATGCAGATTTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCG 449617 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| | || || | ||||| |||||||| ||| | ||||| Sbjct 449618 GACACCATCGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCA 449676 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| |||||||| |||||||| Sbjct 449677 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 449736 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920 ||||||||||||| | || ||||| || ||| | ||| || | || || ||| Sbjct 449737 CATCCAGAAGGAGTCGACCCTGCACCTCGTGCTCCGCCTGCGTGGTGGTGGC 449788 >seq155 Length=76293 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||||||| |||| || || | || Sbjct 26706 ATGCAGATTTTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 26765 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| | || || | ||||| ||||| |||||| | ||||| Sbjct 26766 GACACCATCGATAACGTT-AAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCA 26824 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||||| || |||| |||||||| |||||||| Sbjct 26825 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 26884 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | || || || || ||| | ||| || | || || Sbjct 26885 CATCCAGAAGGAGTCGACCCTTCACCTGGTGCTCCGCCTGCGTGGTGG 26932 >seq1 Length=3302357 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||||||| |||| || || | || Sbjct 871860 ATGCAGATTTTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 871919 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| | || || | ||||| ||||| |||||| | ||||| Sbjct 871920 GACACCATCGATAACGTT-AAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCA 871978 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||||| || |||| |||||||| |||||||| Sbjct 871979 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 872038 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | || || || || ||| | ||| || | || || Sbjct 872039 CATCCAGAAGGAGTCGACCCTTCACCTGGTGCTCCGCCTGCGTGGTGG 872086 >seq79 Length=276002 Score = 98.7 bits (108), Expect = 1e-15 Identities = 256/379 (68%), Gaps = 11/379 (3%) Strand=Plus/Plus Query 139333 TCCCGTGCGGATAAGCGGCTACGTGCTCGGCCTGCCGCGCGGCCTGCACGGCTTCCACGT 139392 ||| |||| | | |||||| | | ||| ||| | |||| |||||| |||||||| Sbjct 192926 TCCGGTGCTGGTCAGCGGCGAGATCAGCGGGCTGGTGGCCGGCAAGCACGGATTCCACGT 192985 Query 139393 GCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGAGCACTTCAACCCCGC 139452 ||||||||| |||||| ||||| ||||||||||| ||| ||||||||| |||| Sbjct 192986 GCACGAGTTTGGCGACAACTCGAACGGCTGCACGTCGGCGGGCCCGCACTTCAA-CCCGT 193044 Query 139453 GCGCCGGGAC-CACGGCGCGCCCGAC-GCCGAGATCAGGCACGTCGGCGACCTGGGCAAC 139510 | ||| ||||||||| ||||| || ||| | || || ||||||||||||||| Sbjct 193045 TCAAGAAGACGCACGGCGCG-CCGACGGCTGAGGAGCGCCATGTGGGCGACCTGGGCAAC 193103 Query 139511 CTCGAGTCGGCGGGCCGCGACGCGC-TCACCGAGGT-GAGCCTGACGGACGGCGTCGTGT 139568 || ||| | ||| | | || | || |||| ||| | | ||| ||| Sbjct 193104 GTC--ATCG--CGTCCGAGTCCGGCGTGGCCAAGGTCGAG-ATCTCCGACTCGCAGGTGA 193158 Query 139569 CCCTGTACGGTCCGCACAGCATCATCGGACGGAGTCTGGTCGTGCACACGGACAGGGACG 139628 | |||| || ||||||| | ||||| || | | || ||||| | ||| ||||| Sbjct 193159 CGCTGTTTGGCGAGCACAGCGTTATCGGCCGCACCATTGTTGTGCATGCCGACGAGGACG 193218 Query 139629 ATCTGGGCCTCACCGACCATCCATTGAGCAAGACCACCGGCAACTCGGGCGGCCGGCTCG 139688 |||||||| || |||| || || || ||||| ||| | ||||| || | | Sbjct 193219 ATCTGGGCAAGGGCGGCCATGAGCTGTCCATCACTACCGGTAACGCCGGCGGTCGCCAGG 193278 Query 139689 CGTGCGGCATCATCGGGAT 139707 | |||||| |||| || || Sbjct 193279 CCTGCGGCGTCATTGGCAT 193297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217738065520