Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2 150 2e-31 seq153 140 3e-28 seq155 129 5e-25 seq1 129 5e-25 seq151 120 3e-22 seq162 104 2e-17 seq160 100 2e-16 >seq2 Length=801100 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | | | ||||||||| | || ||||| || || |||||||| || Sbjct 378273 TACCACCGCGCAGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 378214 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| ||||||||||| || || ||| ||||||| |||||||| || || | Sbjct 378213 AGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCG 378154 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| ||| || || || || | |||| |||||||| ||| | Sbjct 378153 GGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCA 378094 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 |||||| ||| | || |||||||| || || || |||||||||||||||| Sbjct 378093 CCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCATGG 378043 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | | | ||||||||| | || ||||| || || |||||||| || Sbjct 378501 TACCACCGCGCAGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 378442 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| ||||||||||| || || ||| ||||||| |||||||| || || | Sbjct 378441 AGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCG 378382 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| ||| || || || || | |||| |||||||| ||| | Sbjct 378381 GGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCA 378322 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | || |||||||| || || || || ||||||||||| Sbjct 378321 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378273 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || || |||||||| || | ||||| ||||| Sbjct 378710 CACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTC 378651 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| ||||||| |||||||| || || || |||||||||||||| Sbjct 378650 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTG 378591 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || || | |||| |||||||| ||| ||||||| ||| | || || Sbjct 378590 AATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTCTT 378531 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || ||||||||||| Sbjct 378530 GCCGGTGAGGGTCTTCACGAAAATCTGCAT 378501 >seq153 Length=77323 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | | | ||||| ||| | || ||||| || || |||||||| || Sbjct 48280 TACCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 48221 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| |||||||||||| || || ||| ||||||| |||||||| || || | Sbjct 48220 AGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCG 48161 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| |||||||| ||| || || || || | |||| |||||||| ||| | Sbjct 48160 GGATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCA 48101 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| | ||| | || |||||||| || || || ||||||||||||||| Sbjct 48100 CCTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCATG 48051 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || || |||||||| || | |||||| ||||| Sbjct 48717 CACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCGTCCTC 48658 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| ||||||| |||||||| || || || ||||| |||||||| Sbjct 48657 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTG 48598 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || || | || | |||||||| ||| ||||||| ||| | || || Sbjct 48597 AATCTTCTGCTTGACGTTGTCAATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTCTT 48538 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || ||||||||||| Sbjct 48537 GCCGGTGAGGGTCTTCACGAAAATCTGCAT 48508 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | | | ||||| ||| | || ||||| || || |||||||| || Sbjct 48508 TACCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 48449 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| ||||||||||| || || ||| ||||||| |||||||| || || | Sbjct 48448 AGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCG 48389 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| |||||||| ||| || || || || | |||| ||| |||| ||| | Sbjct 48388 GGATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTATCCGACGACTCCA 48329 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | || ||||| || || || || || ||||||||||| Sbjct 48328 CCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 48280 >seq155 Length=76293 Score = 129 bits (142), Expect = 5e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || || |||||||| || | ||||| ||||| Sbjct 26915 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 26856 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||| || |||||||| || || || || ||||||||||| Sbjct 26855 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 26796 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || ||||| | |||| |||||| | ||| ||||||| ||| | || || Sbjct 26795 GATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTT 26736 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||| ||||| || || || ||||||||||||||| Sbjct 26735 GCCCGTCAGGGTCTTAACGAAAATCTGCATGGCT 26702 >seq1 Length=3302357 Score = 129 bits (142), Expect = 5e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || || |||||||| || | ||||| ||||| Sbjct 872069 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 872010 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||| || |||||||| || || || || ||||||||||| Sbjct 872009 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 871950 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || ||||| | |||| |||||| | ||| ||||||| ||| | || || Sbjct 871949 GATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTT 871890 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||| ||||| || || || ||||||||||||||| Sbjct 871889 GCCCGTCAGGGTCTTAACGAAAATCTGCATGGCT 871856 >seq151 Length=1709611 Score = 120 bits (132), Expect = 3e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | ||||| ||||| Sbjct 449767 CACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 449708 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| ||||||| |||||||| || || || |||||||||||||| Sbjct 449707 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTG 449648 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || || | |||| |||||||| ||| ||||| | ||| | || || Sbjct 449647 GATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCAAGGGTGATGGTCTT 449588 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||| || || || || || |||||||||||| Sbjct 449587 GCCCGTAAGGGTCTTGACGAAAATCTGCATG 449557 >seq162 Length=1352108 Score = 104 bits (114), Expect = 2e-17 Identities = 330/508 (65%), Gaps = 8/508 (2%) Strand=Plus/Plus Query 132865 CGACGGTTTCGACGTCGACGGTAAACTTTGTGGCCTGAGCGGCGGGTTTTGTGCGCAAAT 132924 |||| | ||| | |||| ||| ||||| | || | || || || || ||||||| | Sbjct 1302599 CGACCTTCTCGGCATCGATGGTGAACTTGATCGCGTCGGCCGCCGGCTTGGTGCGCAGGT 1302658 Query 132925 AATACATGCCCGTTTTCAGTTTTTTCTCCCACGCGTAAAAGTGTATGCTCGACACCACCG 132984 | |||||||| || ||||| |||| ||| |||| || || || || || | | Sbjct 1302659 AGTACATGCCGGTCTTCAGCCCCTTCTTCCAGCCGTAGAAATGCATCGACGTCAGCTTCT 1302718 Query 132985 AGTAAGTGGGTTCGGCGACAAATAAATTCAGCGATTGACTCTGATCTATGAAAGGAGCAC 133044 ||| |||| || | | | |||||||| || ||||| || ||| | | ||| Sbjct 1302719 GGTAGTTGGGCCCGTCCATGTGGATGTTCAGCGACTGGCTCTGGTCAATGTAGGCGCCAC 1302778 Query 133045 GGTCGGCGGCCATGTTTATTATACACTTTGATTTGATCTCCCATGCCGTCTTGAAGAGAT 133104 | || || ||||||| || || ||| |||||||| | | |||||| || Sbjct 1302779 GATCCGCCGCCATGTCAATGATGACCTTCTGCTTGATCTCATACACGGTCTTGTGCAGGC 1302838 Query 133105 TCTTGACATGCTGTGGTATTTCGTCAATGTTCTGCACGGACCCGTTTTCGGCCAAAATCT 133164 ||| | | || || | ||||| | | |||||| || ||||| | || | || | Sbjct 1302839 GCTTCAGGTCCTCGGGAACCTCGTCCAGCTGCTGCACCGAACCGTTGGCCGCAATAAGCC 1302898 Query 133165 TGTTGCGCAATTCCGGAGT-GT---AAATGTCGAGATCGATTAGCGCTTTGACGAGATAC 133220 | ||||| || | || || | | || | || | || | | || || Sbjct 1302899 GCTGGCGCA--TC--GTGTCGTTCCACAGCCCGCGGTCCACGAGGTCCCGCAGCAGCCAC 1302954 Query 133221 TGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAAC 133280 ||||||||||| || ||||||||||| || ||||| | || | || |||||| || Sbjct 1302955 TGGTTGACCACCTGGAACTCGCCGGCCAGGACGCGGCGCGTGTAGATGTTGGACGTGTAC 1303014 Query 133281 GGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCC 133340 || || || | |||||| |||||| ||||||| |||| ||| ||||||||| ||| Sbjct 1303015 GGCTCAAAGCACTCGTTGAAGCCGAGGATCTGCGATGTCGACGCTGTGGGCATGGGGGCC 1303074 Query 133341 ACCAACAAAGAGTTTCTTACGCCGTACT 133368 || | || ||||| | ||||||| || Sbjct 1303075 ACAAGCAGCGAGTTGCGCACGCCGTGCT 1303102 >seq160 Length=71855 Score = 100 bits (110), Expect = 2e-16 Identities = 330/508 (65%), Gaps = 9/508 (2%) Strand=Plus/Plus Query 132865 CGACGGTTTCGACGTCGACGGTAAACTTTGTGGCCTGAGCGGCGGGTTTTGTGCGCAAAT 132924 |||| | ||| | |||| ||| ||||| | || | || || || || ||||||| | Sbjct 70513 CGACCTTCTCGGCATCGATGGTGAACTTGATCGCGTCGGCCGCCGGCTTGGTGCGCAGGT 70572 Query 132925 AATACATGCCCGTTTTCAGTTTTTTCTCCCACGCGTAAAAGTGTATGCTCGACACCACCG 132984 | |||||||| || ||||| |||| ||| |||| || || || || || | | Sbjct 70573 AGTACATGCCGGTCTTCAGCCCCTTCTTCCAGCCGTAGAAATGCATCGACGTCAGCTTCT 70632 Query 132985 AGTAAGTGGGTTCGGCGACAAATAAATTCAGCGATTGACTCTGATCTATGAAAGGAGCAC 133044 ||| |||| || | | | |||||||| || ||||| || ||| | | ||| Sbjct 70633 GGTAGTTGGGCCCGTCCATGTGGATGTTCAGCGACTGGCTCTGGTCAATGTAGGCGCCAC 70692 Query 133045 GGTCGGCGGCCATGTTTATTATACACTTTGATTTGATCTCCCATGCCGTCTTGAAGAGAT 133104 | || || ||||||| || || ||| |||||||| | | |||||| || Sbjct 70693 GATCCGCCGCCATGTCAATGATGACCTTCTGCTTGATCTCATACACGGTCTTGTGCAGGC 70752 Query 133105 TCTTGACATGCTGTGGTATTTCGTCAATGTTCTGCACGGACCCGTTTTCGGCCAAAATCT 133164 ||| | | || || | ||||| | | |||||| || ||||| | || | || | Sbjct 70753 GCTTCAGGTCCTCGGGAACCTCGTCCAGCTGCTGCACCGAACCGTTGGCCGCAATAAGCC 70812 Query 133165 TGTTGCGCAATTCCGGAGT-GT---AAATGTCGAGATCGATTAGCGCTTTGACGAGATAC 133220 | ||||| || | || || | | || | || | || | | || || Sbjct 70813 GCTGGCGCA--TC--GTGTCGTTCCACAGCCCGCGGTCCACGAGGTCCCGCAGCAGCCAC 70868 Query 133221 TGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAAC 133280 ||||||||||| || ||||||||||| || ||||| | || | || |||||| || Sbjct 70869 TGGTTGACCACCTGGAACTCGCCGGCCAG-ACGCGGCGCGTGTAGATGTTGGACGTGTAC 70927 Query 133281 GGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCC 133340 || || || | |||||| |||||| ||||||| |||| ||| ||||||||| ||| Sbjct 70928 GGCTCAAAGCACTCGTTGAAGCCGAGGATCTGCGATGTCGACGCTGTGGGCATGGGGGCC 70987 Query 133341 ACCAACAAAGAGTTTCTTACGCCGTACT 133368 || | || ||||| | ||||||| || Sbjct 70988 ACAAGCAGCGAGTTGCGCACGCCGTGCT 71015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829199781084