Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq162 84.2 4e-11 >seq162 Length=1352108 Score = 84.2 bits (92), Expect = 4e-11 Identities = 177/258 (69%), Gaps = 7/258 (3%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGC-CGC-CTCCTTAAGAGTATCATAAATACCCTCAA 94849 || ||||| ||||||| || ||| ||| | |||| || || || || || ||||| | Sbjct 1304139 CCGCCAGCGTTCTTGGAAATC--TGCGCGCACACCTTCAGCGTGTCGTAGATGCCCTCGA 1304196 Query 94850 TGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTT--GGGGTGTGACTGTTCC 94907 |||| ||||| | | ||| |||||||||||| || || | ||| | | | || || Sbjct 1304197 TGCTGTCATCCGACATGGCCACAAGGAAGCACGACGAGAGCTGCGGGACGCGGC-GTGCC 1304255 Query 94908 ACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGT 94967 | || ||||| || || || || || || || | | ||||||||| | || || Sbjct 1304256 CGAGTTGAACAGCGTCGGCGACGCGTGCGTGAAGAACTTTGACGACATGAGGTTGTACGT 1304315 Query 94968 TTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTC 95027 || || | | | ||||| || ||||| ||||| | | ||| ||||| | || || Sbjct 1304316 CTCGATCGCCGCGTCAATGTCCGAGCCGTGGATGCCCAGGGACACGCGCATCACCAGGTG 1304375 Query 95028 CTGAGGGCGCTCAACCAA 95045 ||| |||||||| ||||| Sbjct 1304376 CTGCGGGCGCTCGACCAA 1304393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581121856785