Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1 154 1e-32 >seq1 Length=3302357 Score = 154 bits (170), Expect = 1e-32 Identities = 412/614 (67%), Gaps = 33/614 (5%) Strand=Plus/Minus Query 20934 ACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGT-CAG 20992 || ||||| ||||||| || | ||| |||| | ||||| || | |||||| | ||| Sbjct 238062 ACATGGTTCTTGTAAATATGCGTGTCGCCCATGCAATGCACGAAC-CACCCGGGCTTCAG 238004 Query 20993 GCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGAC 21052 || ||||| || || |||| ||||| | || ||| ||| || || ||||| || Sbjct 238003 TCCAGTGACCTGCGCAATCAACCGGGTCAGCAAAGCATAGGAGGCAATATTGAACGGCAC 237944 Query 21053 CCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCC--CCGAG-- 21108 || | ||| | ||| || | |||||||| ||||||||||||| | | ||| | Sbjct 237943 GCCCAAGCCGACATCGCATGAACGCTGGTACATCTGGCAGGACAGCGCAGCATCCGGGGA 237884 Query 21109 --CC---------ACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCG 21156 || || ||||||| | |||| | || || || || | |||||| Sbjct 237883 ACCCGGCTTGGAGACAAAAAACTG-CGCAAACATATGGCACGGCGGCAACGCCATCTTGC 237825 Query 21157 CGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCG--TGGGGCCGCCTGTT 21214 | | ||| ||| |||||||||| || || ||| || || ||| ||| | ||| | Sbjct 237824 CCATATCCTTGGGATTCCACGCGCTCAGAATGATCCGTCGGTCGGTTGGATTCTCCT--T 237767 Query 21215 AATTAGATCC-ACCACGTAACGCAGCTGG-TCCACCCCCTGACCCTCGTAGTTGGCGTCG 21272 || | || | ||| | || || | || || || ||||| ||||| ||||||| Sbjct 237766 GATC-GCTCGGATCACCTCCGCCAACTTGATCGACACCTTGACCAGAGTAGTCGGCGTCG 237708 Query 21273 GCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCG 21332 || | |||| || || |||||||| | ||||||| | ||||||||||| ||||| ||| Sbjct 237707 GCGTCAGTGTATTCGGCGCCAAAATGCCGCCACTGGTAGCCGTACACCGGACCCAGGTCG 237648 Query 21333 CCCTCGCGGCGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCC 21392 || ||| ||||| ||||| |||| ||| || | ||| |||| ||||| Sbjct 237647 CCGGTGCGCCGGTCGGTTAAGCCACGCGCATCCAGGAATTCTCGGCTGCCGTTACCGTCC 237588 Query 21393 CAAATTTTTACG-CCGCGGCGC-GACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACC 21450 || || | ||| || ||||| | ||| | | ||||||| ||||| |||||||| Sbjct 237587 CAGATGTGCACGCCCTGGGCGCTCAGCGTTTG--TGCGTCGGTGCTGCCCCGGATAAACC 237530 Query 21451 ACAGCAACTCCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAA-- 21508 |||| | ||| || || ||||| | ||| ||||| | ||||| |||| ||||| || Sbjct 237529 ACAGGAGCTCTTCTACTACGCCGCGCCAGAACACGCGCTTGGTTGTTAGAAGAGGGAAGG 237470 Query 21509 -CTCGTCCCTGAGG 21521 ||||| |||||| Sbjct 237469 TGTCGTCGCTGAGG 237456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774816530960