Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq79 91.5 1e-13 >seq79 Length=276002 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 21138 GACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGC-GTCGGGAGCGCCGTGATTTTGGT 21196 |||||||||||| ||||| || || ||||| | || ||||| |||||||| | | | Sbjct 193106 GACGTTGCCCAGGTCGCCCACATGGCGCTCCTCAGCCGTCGGC-GCGCCGTGCGTCTTCT 193048 Query 21197 GCGTAGGGTTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGT 21256 ||||| |||||| ||| || |||||||||||||| | ||||||| ||||||| Sbjct 193047 TGAACGGGTTGAAGTGCGGGCCCGCCGACGTGCAGCCGTTCGAGTTGTCGCCAAACTCGT 192988 Query 21257 GAACGTGAAAGCCGTGC 21273 | ||||| || |||||| Sbjct 192987 GCACGTGGAATCCGTGC 192971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414571653058438