Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq79 87.8 2e-12 >seq79 Length=276002 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 22341 CGGCTTGCACGGTTTTCACGTGCACGAATTTGGCGACACAAGCAATGGGTGCACGTCGGC 22400 |||| |||||| || ||||||||||| |||||||||| || || ||||||||||| Sbjct 192965 CGGCAAGCACGGATTCCACGTGCACGAGTTTGGCGACAACTCGAACGGCTGCACGTCGGC 193024 Query 22401 AGGCGAGCACTTTAACCCTACGCACCGGCAACATGGCGCGCCTGAC-GCTGCGGAGCGTC 22459 ||| |||||| ||||| | | || |||||||| ||| |||| |||||| | Sbjct 193025 GGGCCCGCACTTCAACCCGTTCAAGAAGACGCACGGCGCGCC-GACGGCTGAGGAGCGCC 193083 Query 22460 ACGTCGGCGATTTGGGCAACGT 22481 | || ||||| |||||||||| Sbjct 193084 ATGTGGGCGACCTGGGCAACGT 193105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419586039185787