Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 6e-12 >seq1 Length=3302357 Score = 86.0 bits (94), Expect = 6e-12 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 5327 ATTAGCTGAGCTAT-CCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAA 5385 || ||||| || || || ||| |||||||| | ||| ||||| | ||| || || Sbjct 2062522 ATCAGCTGCGCAATTCCGGTCGCCCTTCTTGATCTCGAAGTCCACTTCGCCGTGATTGAA 2062463 Query 5386 CAGCACCACCCCGACATTGCCTCGGTAGTCTT-CGTCGATAACGCCAGCGCCCACGTCGA 5444 ||| | ||| || | |||| |||||||| | |||| | |||||| |||||| ||| | Sbjct 2062462 CAGAATAACCTTGATAGTGCCACGGTAGTCCTGCGTCAACAACGCCGGCGCCCGTGTCAA 2062403 Query 5445 TAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTA 5490 || ||| |||| || || ||||| || ||||||||||| |||| Sbjct 2062402 TACCGTGCTTGAAGGCCAGCCCGGAGCGAGGTGCTATGCGCGCGTA 2062357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447749129508240