Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq217 109 7e-19 >seq217 Length=908848 Score = 109 bits (120), Expect = 7e-19 Identities = 300/457 (66%), Gaps = 7/457 (2%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || || || || |||||| |||||||| | | || || ||||| || Sbjct 400052 AACAGCACGCAGGCAAAGTCCGTGTGCAGGCCCTCGTCGCGGCAGATCAGCTCGTTCGAG 400111 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || || ||||| ||||| ||||| ||||| || ||||| || || || || || || || Sbjct 400112 AAGGTCAGTCCAGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATCGACGCAAACGAGCCC 400171 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC---G 33471 || |||||||| || || || || |||||||| | || | | | || | ||| | Sbjct 400172 GAGAAGAAGATGCCCTCGACCGCCGCAAAGGCCACCAGGCGCACGCCGAACTTGGCCTCG 400231 Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 33531 | || || ||||| | ||||| ||||||||||| | || || || | || Sbjct 400232 CGGTTATCGATCCAGCGAAGCGCCCAGTCGGCCTTCTTGCGGATGCACGGGATGTTGTCG 400291 Query 33532 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 33591 || || | || | | ||| || || || | || || || || | || Sbjct 400292 ATAGCGTGGAACAAAAAGTCGCGCTCCTTGGGGTCGCGGATGTACGTGTCAATGAGCAGC 400351 Query 33592 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 33651 ||| | ||||| || ||||| ||||| |||||| || |||||||| | | ||| Sbjct 400352 GAGTACGTCTCCGAGTGGATGTTCTCAATCATCATCTGGAAGCCGTAGAACGACCGCGCC 400411 Query 33652 TCGGTAATCTGTACTTCTGTACAAAATCGTTC--CGCCAAATTTTCATTCACTATTCCGT 33709 |||| ||||| || || || | ||| |||| | ||| || || || || || |||| Sbjct 400412 TCGGGGATCTGAACCTCGGTGCTAAA--GTTCTGCACCAGGTTCTCGTTGACGATGCCGT 400469 Query 33710 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA 33746 | ||| ||||| ||||| | || | || ||||| Sbjct 400470 CCGAGGCAGCAAAGAACGCGAGCACGTACTTGATAAA 400506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945432387320