Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq162 381 2e-100 seq160 239 1e-57 >seq162 Length=1352108 Score = 381 bits (422), Expect = 2e-100 Identities = 1158/1760 (66%), Gaps = 47/1760 (3%) Strand=Plus/Minus Query 363427 CGTATCAATGGTGATATTGTT-GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGG 363485 || |||||||| | ||| | || ||||||||||| || | ||||| || | | || Sbjct 1304409 CGCATCAATGGGCGTGTTGGTCGAGCGCCCGCAGCACCTGGTGATGCGCGTGTCCCTGGG 1304350 Query 363486 TATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTC---G 363542 ||||| || |||| |||| || ||||| || || || || || | || || | Sbjct 1304349 CATCCACGGCTCGGACATTGACGCGGCGATCGAGACGTACAACCTCAT--GTCGTCAAAG 1304292 Query 363543 TGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCA-CAGATGT 363601 | | ||||||||||| |||| || ||| ||| | || || | ||| ||| | | Sbjct 1304291 T-TCTTCACGCACGCGTCGCCGACGCTGTTCAACTCGGGCACGCCGCGTCCCGCAGCTCT 1304233 Query 363602 CTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTA 363661 | || ||||| ||| | ||| ||| || ||||||||| |||| ||||| || | Sbjct 1304232 CGTCGTGCTTCCTTGTGGCCATGTCGGATGACAGCATCGAGGGCATCTACGACACGCTGA 1304173 Query 363662 AGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGT 363719 || || || | ||||||||||| || ||||| ||||| || | || | ||| | Sbjct 1304172 AGGTGTGCGCGCAGATTTCCAAGAACGCTGGCGGCATTGGGCTGCA-CG-TGAGCAACAT 1304115 Query 363720 TCGTGCACAGAACAGTTACATT-CGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCA 363778 || || | | |||||| | ||||| || ||||| ||||| || || | Sbjct 1304114 CCGGGCTACGGGCTCATACATTGCAGGGCACCAACGGCACGTCGAACGGGCTTGTGCCGA 1304055 Query 363779 TGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAG 363838 |||| |||||||| |||| || ||| |||||||||||||||| || ||||| || Sbjct 1304054 TGCTGCGTGTGTTCAACAACACGGCGCGGTACGTCGACCAGGGCGGCAACAAGCGGCCAG 1303995 Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898 | |||||||| || ||||| ||||| ||||||||| | |||| ||| || || || | Sbjct 1303994 GTGCGTTTGCGATCTATCTGGAGCCGTGGCATGCCGATGTGTTTGCGTTCCTGGATCTGC 1303935 Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 | || ||| || || ||||| |||| || || || ||||||||||| || ||| | Sbjct 1303934 GCAAGAACCACGGCAAGGAGGAGGTGCGGGCCCGCGACCTGTTCTATGCGCTGTGGATCC 1303875 Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018 | || | || ||||||||||| || || || ||||| || || ||||| |||| Sbjct 1303874 CGGATCTGTTCATGAAGCGCGTCATTGCCGGCGGCAAGTGGTCGCTGTTCTGCCCGCACG 1303815 Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078 | || || | || || ||||| || || | || || || || ||||| | Sbjct 1303814 AGGCACCCGGCATGCAGGAGGTGTGGGGCGATGAGTTTGAGGCCCTGTATACCAAGTACG 1303755 Query 364079 ---AATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCA 364135 | || || ||| || ||| || |||||||||||| |||| ||| ||| Sbjct 1303754 AGAACACGCCTGGCCTGGCGCGCTCGACCATCGACGCACAGAAGCTGTGGTATGCGATCC 1303695 Query 364136 TGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCA 364195 |||| ||||||| ||||| || | || | ||| ||||||| ||| | |||||||||| Sbjct 1303694 TGGACGCGCAGATCGAGACGGGGAACCCGTTCATGCTGTACAAGGATGCATGCAACCGCA 1303635 Query 364196 AGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTA 364252 |||| ||||||||| |||| || || | ||| || || ||||| || || ||||| Sbjct 1303634 AGTCGAACCAGCAGAACCTCGGCACGA-TCA--AGTGCTCGAACCTGTGCACAGAGATCG 1303578 Query 364253 TTGAATACACCGCTCCCGACGAGACTGCC-GTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 | || ||| | ||||||||| ||| || || ||||| |||||||| ||||| ||| Sbjct 1303577 TCGAGTACTCGAGCCCCGACGAGGTGGCCTGTGTGCAACCTGGCGTCGATTGCGCTGCCG 1303518 Query 364312 GCGTTTGTAAAAGATGG--TAC---TTTTGACCACCAGCATCTTTATGACGTAACCTATC 364366 ||||||| ||| || || | ||| |||||| || | ||||| ||| | Sbjct 1303517 TCGTTTGT-CAAGTCGGCCGACCGAGTACGACTTCCAGCAGCTGCACGACGTCACCAAGG 1303459 Query 364367 ATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGA-AGCC 364425 | || || || ||||| | ||||||| || | || || | || || | | Sbjct 1303458 TGGTCACCAAGAACCTGAACAAGATCATCGACATCAACTTCTACCCGGTGCCCGAGACGC 1303399 Query 364426 GAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTT 364485 | || || ||||| || || || || || |||| || ||||| || ||||| | Sbjct 1303398 GTCCGCAGCAACATGCGCCACCGTCCCATCGGCATTGGAGTTCAGGGGCTGGCTGATGCC 1303339 Query 364486 TTTAT---GATGCTCAAGATGGCATTTGATTC-GCCTGACGCTCGTGTTCTAAATAAGGA 364541 || | |||| | ||| | || || || |||||| || || | || || | Sbjct 1303338 TTCCTCGCCATGCGC---ATGCCGTTCGAGTCGGCCTGAGGCACGCGAGCTGAACCGCGC 1303282 Query 364542 GATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAA 364601 ||||| || || || || ||| || | || |||||||| |||| | | Sbjct 1303281 CATCTTCGAGACCATCTACCATGCGGCGCTCGAGGCGTCGTGTGAGCTGGCGGCCGTCCA 1303222 Query 364602 GGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCT 364661 || ||| || || |||| ||| | ||| |||| || | ||| ||||| Sbjct 1303221 CGGCGCCTACGAGACGTACCAGGGCAGCCCGATGTCGAAGGGCAAGCTGCAGCCGGATCT 1303162 Query 364662 ATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAA 364721 ||| || |||| || | ||| ||| ||||||| |||| || |||| || | | Sbjct 1303161 GTGGGGCGTGGCGCCGTCGGACCGCTGGGACTGGGACGCGCTCCGGGCCAAGGTGCGGGA 1303102 Query 364722 GCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGAT 364781 ||| || |||||||| || || || ||||||||||| || || || | ||||| Sbjct 1303101 GCACGGCGTGCGCAACTCGCTGCTTGTGGCCCCCATGCCCACAGCGTCGACATCGCAGAT 1303042 Query 364782 CCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCT 364841 |||||| |||||||||||| || |||| || ||| | || | ||||| || || Sbjct 1303041 CCTCGGCTTCAACGAGTGCTTTGAGCCGTACACGTCCAACATCTACACGCGCCGCGTCCT 1302982 Query 364842 TTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCT 364901 |||| || || | ||| || || ||| || | ||| || ||||||||||| Sbjct 1302981 GGCCGGCGAGTTCCAGGTGGTCAACCAGTGGCTGCTGCGGGACCTCGTGGACCGCGGGCT 1302922 Query 364902 GTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACAT--T 364959 |||| |||| ||| | | || || || || ||||| |||||| | | Sbjct 1302921 GTGGAACGACACGATGCGCCAGCGGCTTATTGCGGCCAACGGTTCGGTGCAGCAGCTGGA 1302862 Query 364960 CCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGC-G 365018 | ||| |||| || || ||||||| | |||| ||||| | || || || || | Sbjct 1302861 CGAGG--TTCCCGAGGACCTGAAGCGCCTGCACAAGACCGTGTATGAGAT---CAAGCAG 1302807 Query 365019 AA-CTC-TCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTT 365076 || || ||||||| |||||||| ||||| || || | || |||||||||||| | Sbjct 1302806 AAGGTCATCATTGACATGGCGGCGGATCGTGGCGCCTACATTGACCAGAGCCAGTCGCTG 1302747 Query 365077 AACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGG 365136 ||| | |||| ||| | || | ||||| || || |||||||||||||| ||| Sbjct 1302746 AACATCCACATGGACGGGCCCAACTACCAGAAGCTGACGTCGATGCATTTCTACGGCTGG 1302687 Query 365137 AAATCCGGTCTTAAGACAGG 365156 || || || ||||| || Sbjct 1302686 AAGAAGGGGCTGAAGACCGG 1302667 >seq160 Length=71855 Score = 239 bits (264), Expect = 1e-57 Identities = 839/1290 (65%), Gaps = 34/1290 (3%) Strand=Plus/Minus Query 363885 GTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTA 363944 ||| || || || || || ||| || || ||||| |||| || || || |||||||| Sbjct 71854 GTTCCTGGATCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGGGCCCGCGACCTGTTCTA 71795 Query 363945 TGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACT 364004 ||| || ||| | | || | || ||||||||||| || || || || || || Sbjct 71794 TGCGCTGTGGATCCCGGATCTGTTCATGAAGCGCGTCATTGCCGGCGGCAAGTG-TCGCT 71736 Query 364005 CTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCT 364064 || ||||| ||||| || || | || || ||||| || || | || || || Sbjct 71735 GTTCTGCCCGCACGAGGCACCCGGCATGCAGGAGGTGTGGGGCGATGAGTTTGAGGCCCT 71676 Query 364065 ATACGAAAAGTATGAAT---CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCT 364121 || ||||| || || || ||| || ||| || |||||||||||| Sbjct 71675 GTATACCAAGTACGAGAACACGCCTGGCCTGGCGCGCTCGACCATCGACGCACAGAAGCT 71616 Query 364122 ATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGA 364181 |||| ||| ||| |||| ||||||| ||||| || | || | ||| ||||||| || Sbjct 71615 GTGGTATGCGATCCTGGACGCGCAGATCGAGACGGGGAACCCGTTCATGCTGTACAAGGA 71556 Query 364182 TTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC---AACCT 364238 | | |||||||||||||| ||||||||| |||| || || | ||| || || ||||| Sbjct 71555 TGCATGCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGA-TCA--AGTGCTCGAACCT 71499 Query 364239 ATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 || || ||||| | || ||| | ||||||||| || || || ||||| ||||| Sbjct 71498 GTGCACAGAGATCGTCGAGTACTCGAGCCCCGACGAGGTGGCTGTGTGCAACCTGGCGTC 71439 Query 364299 GATCGCGCTTCCGGCGTTTGTAAAAGATGGTAC---TTTTGACCACCAGCATCTTTATGA 364355 ||| ||||| ||| ||||||| ||| | || | ||| |||||| || | || Sbjct 71438 GATTGCGCTGCCGTCGTTTGT-CAAGTCGCGACCGAGTACGACTTCCAGCAGCTGCACGA 71380 Query 364356 CGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAAT 364415 ||| ||| | | || || || ||||| | ||||||| || | || || | Sbjct 71379 CGTCACCAAGGTGGTCACCAAGAACCTGAACAAGATCATCGACATCAACTTCTACCCGGT 71320 Query 364416 TCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCC 364474 || | || || | || || ||||| || || || || || |||| || ||||| | Sbjct 71319 GCCCG-AGACGCGTCGCAGCAACATGCG-CACCGTCCCATCGGCATTGGAGTTCAGGGGC 71262 Query 364475 TCGCTGACGTTTTTAT---GATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTC 364531 | ||||| | || | |||| | ||| | || || ||| |||| || || | | Sbjct 71261 TGGCTGATGCCTTCCTCGCCATGCGC---ATGCCGTTCGAGTCGGCTGAGGCACGCGAGC 71205 Query 364532 TAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGG 364591 | || | ||||| || || || || ||| || | || |||||||| ||| Sbjct 71204 TGAACCGCGCCATCTTCGAGACCATCTACCATGCGGCGCTCGAGGCGTCGTGTGAGCTGG 71145 Query 364592 CAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCC 364651 | | | || ||| || || |||| ||| | ||| |||| || | | Sbjct 71144 CGGCCGTCCACGGCGCCTACGAGACGTACCAGGGCAGCCCGATGTCGAAGGGCAAGCTGC 71085 Query 364652 AGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCA 364711 || ||||| ||| || |||| || | ||| ||| ||||||| |||| || ||| Sbjct 71084 AGCCGGATCTGTGGGGCGTGGCGCCGTCGGACCGCTGGGACTGGGACGCGCTCCGGGCCA 71025 Query 364712 ACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTA 364771 | || | |||| || |||||||| || || || ||||||||||| || || | Sbjct 71024 AGGTGCGGGAGCACGGCGTGCGCAACTCGCTGCTTGTGGCCCCCATGCCCACAGCGTCGA 70965 Query 364772 CTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCAC 364831 | | ||||||||||| |||||||||||| || |||| || ||| | || | | Sbjct 70964 CATCGCAGATCCTCGGCTTCAACGAGTGCTTTGAGCCGTACACGTCCAACATCTACACGC 70905 Query 364832 GCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCG 364891 |||| | ||| |||| || || | ||| || || ||| || | ||| || | Sbjct 70904 GCCGCG-TCTGGCCGGCGAGTTCCAGGTGGTCAACCAGTGGCTGCTGCGGGACCTCGTGG 70846 Query 364892 ACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGC 364951 |||||||||||||| |||| ||| | | || || || || ||||| |||| Sbjct 70845 ACCGCGGGCTGTGGAACGACACGATGCGCCAGCGGCTTATTGCGGCCAACGGTTCGGTGC 70786 Query 364952 AGAACAT--TCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAAT 365009 || | | | ||| |||| || || ||||||| | |||| ||||| | || || Sbjct 70785 AGCAGCTGGACGAGG--TTCCCGAGGACCTGAAGCGCCTGCACAAGACCGTGTATGAGAT 70728 Query 365010 TTCCATGC-GAA-CTC-TCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAG 365066 || || ||| || ||||||| |||||||| ||||| || || | || ||||| Sbjct 70727 ---CAAGCAGAAGGTCATCATTGACATGGCGGCGGATCGTGGCGCCTACATTGACCAGAG 70671 Query 365067 CCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTT 365126 ||||||| | ||| | |||| ||| | || | ||||| || || |||||||| Sbjct 70670 CCAGTCGCTGAACATCCACATGGACGGGCCCAACTACCAGAAGCTGACGTCGATGCATTT 70611 Query 365127 CTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||||| ||||| || || ||||| || Sbjct 70610 CTACGGCTGGAAGAAGGGGCTGAAGACCGG 70581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349809277514