Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq153 86.0 5e-12 seq2 82.4 7e-11 >seq153 Length=77323 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || || | || ||| | || || ||| | Sbjct 48052 ATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCGTCG 48111 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| || |||||| ||||| |||||||| || || || || Sbjct 48112 GACACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 48171 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||||||||| ||||| |||| | | | | || || || ||| Sbjct 48172 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAAC 48231 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 48232 ATCCAGAAGGAGTCGAC 48248 >seq2 Length=801100 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || || | || ||| |||| || ||| | Sbjct 378045 ATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 378104 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| || |||||| ||||| || ||||| || || || || Sbjct 378105 GACACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 378164 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||||||||| ||||| || | | | | | || || || ||| Sbjct 378165 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 378224 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || || || || | || || ||| Sbjct 378225 ATCCAGAAGGAGTCGACTCTGCACTTGGTG 378254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934810555185