Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq162 86.0 8e-12 >seq162 Length=1352108 Score = 86.0 bits (94), Expect = 8e-12 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 15038 CAGATGCGCACGCCCGAGATTGGCGACAAGTTTTGCTCT-GGTATGGCGCAAAAGGGCAC 15096 |||| |||| ||||||| ||||||||||||||| ||| | ||||| || |||||| Sbjct 1313270 CAGACGCGCCGGCCCGAGCTTGGCGACAAGTTTTCGTCTCGACATGGC-CAGAAGGGCGT 1313212 Query 15097 GTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGA 15156 ||| ||||| ||| | | ||||| |||||||| || || | || || || || Sbjct 1313211 GTGTGGCATCATTGTGCAGCAGGAGGACATGCCGTTCACGGACCGCGGTGTGTTCCCGGA 1313152 Query 15157 CATTATCATCAACCCCAACTGCATCCCGTCCCGCATGAC 15195 ||| ||||| ||||| || | ||||||| || ||||| Sbjct 1313151 CATCATCATGAACCCGCACGGTTTCCCGTCGCGAATGAC 1313113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611390265175200