Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq217 201 2e-46 seq2 179 7e-40 seq153 176 8e-39 seq151 167 4e-36 seq155 149 1e-30 seq1 149 1e-30 >seq217 Length=908848 Score = 201 bits (222), Expect = 2e-46 Identities = 596/902 (66%), Gaps = 39/902 (4%) Strand=Plus/Plus Query 9934 TCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCT 9993 |||| ||||| ||||||||||| ||||| || || |||||||||||||| |||||||| Sbjct 399756 TCATAACGCCGGCCTTCTGGTAGTCCGACACGCGCTTCTCGAAGAAGTTGGTCTTGCCCT 399815 Query 9994 CGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAAC 10053 | || || | ||||||||||| |||||||| ||| | |||||||| | | Sbjct 399816 GCATCGAGATCATGTCCATGAAGTCGAAGGGGTTGGTGGCCAGGTAGTGCTTGGGCTGGC 399875 Query 10054 CGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGT 10113 | || || | | ||||||||| || |||||||| ||||||| ||| || | | || Sbjct 399876 CCAGAGCGACCAGCAGGCGGTCAGCAACAAACTCGATATACTGGCACATGAGCTTGGCGT 399935 Query 10114 TCATGCCAATCATGCGGCA-GGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172 ||||||| |||| | | || ||| | || ||| | | ||| |||| ||| ||| ||| Sbjct 399936 TCATGCCGATCA-GTGACACGGGCAGCGCCTCGGACAGGAACTCCTGCTCGATGGTGACA 399994 Query 10173 GCTTCCTCGACGATGCTCT------TTACCACGTCAAGGGACAGCTTGTTCTCGAGCT-- 10224 | ||||| |||| ||| | ||| || | || | || | || || | Sbjct 399995 G---CCTCGGTGATGATCTGGAGGATGACCTCGGC---GGCCGGCGGGGACTGCAGGTGG 400048 Query 10225 TCGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGT 10284 | || |||| | |||| | | ||| |||||||||||||||| ||| | ||||| Sbjct 400049 TGGA--ACAGCACGCAGGCAAAGTCCGTGTGCAGGCCCTCGTCGCGGCAGATCAGCTCGT 400106 Query 10285 TGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAAT-GGCGCAGAAC 10343 | || || ||| || ||||| || || || || |||||||| || | |||| ||| Sbjct 400107 TCGAGAAGGTCAGTCCAGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATCGACGCA-AAC 400165 Query 10344 GACCCGGAGAACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 || || |||| |||||| ||||| || | | |||| || |||||| | |||| Sbjct 400166 GAGCCCGAGA--AGAAGATGCCCTCGACCGCCGCAAAGGCCACCAGGCGCACGCCGAACT 400223 Query 10402 AGCGGTCGCGCGAAAAG-TATTTCGA--GGCCCACGCTGCCTTCTTTCCCACGGCAGGGA 10458 | ||||| | | | ||| ||||| | |||||||| | | | |||| Sbjct 400224 TGGCCTCGCGGTTATCGATCCAGCGAAGCGCCCAGTCGGCCTTCTTGCGGATGCACGGGA 400283 Query 10459 TCGTCTCGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAA 10518 | | |||||||| | ||| | || ||||| | ||| || | |||| Sbjct 400284 TGTTGTCGATAGCGTGGAACAAAAAGTCGCGCTCCTTGGGGTCGCGGATGTACGTGTCAA 400343 Query 10519 GGAGCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACA 10578 |||||| ||||| ||| ||||| | ||||| | | |||| | |||||||| Sbjct 400344 TGAGCAGCGAGTACGTCTCCGAGTGGATGTTCTCAATCATCATCTGGAAGCCGTAGAACG 400403 Query 10579 TACGTGCCGAGGGGTCCGTGACTTCCTCGG---CAAAGTTGTTGTTCAGGTTCTCCATCA 10635 || ||| |||| | ||| |||||| |||||| | ||||||||| | | Sbjct 400404 ACCGCGCCTCGGGGATC-TGA--ACCTCGGTGCTAAAGTTCTGCACCAGGTTCTCGTTGA 400460 Query 10636 CCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCAT 10695 | ||||| || | | |||||||| |||| | || |||||| ||||| ||||| | | Sbjct 400461 CGATGCCGTCCGAGGCAGCAAAGAACGCGAGCACGTACTTGATAAAGTGACGCTCGTTGT 400520 Query 10696 CGTTCA---GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGG 10752 |||||| | || || ||||| ||| ||||| || | || ||||| | | Sbjct 400521 CGTTCAGGCGGTTGTC---CCAGTGGCCCATGTCCTGCGACAGGTCGATTTCCTCGGCCG 400577 Query 10753 TCCAGAAAGTGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGA 10812 ||||||| | || || |||||||||||||| | || ||| ||||| ||| |||| Sbjct 400578 TCCAGAACGACGCCTCGTGCTTCTTGTACATCTCCCAGATCTCGTGGTACTTGATCGGGA 400637 Query 10813 AC 10814 || Sbjct 400638 AC 400639 >seq2 Length=801100 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||||||| || || ||||| || |||||||| || || ||| Sbjct 378499 CCACCGCGCAGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 378440 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | || ||||| || || Sbjct 378439 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGG 378380 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| ||||||| ||||||||||| | || || || Sbjct 378379 ATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACC 378320 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || ||||||||||| ||||| |||||||| Sbjct 378319 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378273 Score = 174 bits (192), Expect = 3e-38 Identities = 179/234 (76%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| || || ||||| ||||| | |||| ||| || || ||||| || |||||||| || Sbjct 378734 TTAGTTGCCGCCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTA 378675 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 || ||||| || | || || || | |||||| |||||||| ||||| | || ||||| Sbjct 378674 GTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTC 378615 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || || ||||| |||||||| |||||||| ||||||| ||||||||||| | || Sbjct 378614 AGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGA 378555 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||| || || || ||||||||||| ||||| |||||||| Sbjct 378554 CTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378501 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||||||| || || ||||| || |||||||| || || ||| Sbjct 378271 CCACCGCGCAGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 378212 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | || ||||| || || Sbjct 378211 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGG 378152 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| ||||||| ||||||||||| | || || || Sbjct 378151 ATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACC 378092 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || ||||||||||| || || |||||||| Sbjct 378091 TCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 378045 >seq153 Length=77323 Score = 176 bits (194), Expect = 8e-39 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||| ||| || || ||||| || |||||||| || || ||| Sbjct 48278 CCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 48219 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| ||||| | || ||||| || || Sbjct 48218 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGG 48159 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| |||||||| ||||||| ||||||||||| | || || || Sbjct 48158 ATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACC 48099 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | |||||| || || || ||||||||||| || || |||||||| || Sbjct 48098 TCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCATGAT 48049 Score = 174 bits (192), Expect = 3e-38 Identities = 179/234 (76%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| || || ||||| ||||| | |||| ||| || || ||||| || |||||||| || Sbjct 48741 TTAGTTGCCGCCGCGCAGGCGAAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTA 48682 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 || ||||| || | || || || | |||||| |||||||| ||||| | || ||||| Sbjct 48681 GTCCGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTC 48622 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || || |||||||||||||| |||||||| ||||||| || |||||||| | || Sbjct 48621 AGGCGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCAATGGTGTCCGACGA 48562 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||| || || || ||||||||||| ||||| |||||||| Sbjct 48561 CTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 48508 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||| ||| || || ||||| || |||||||| || || ||| Sbjct 48506 CCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 48447 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | || ||||| || || Sbjct 48446 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGG 48387 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| |||||||| ||||||| |||||||| || | || || || Sbjct 48386 ATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTATCCGACGACTCCACC 48327 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || ||||||||||| ||||| |||||||| Sbjct 48326 TCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 48280 >seq151 Length=1709611 Score = 167 bits (184), Expect = 4e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || |||||||| || || || Sbjct 449784 CCACCACGCAGGCGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 449725 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | || ||||| || ||| Sbjct 449724 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGA 449665 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| ||||||| ||||||||||| | || || || Sbjct 449664 ATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACC 449605 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | ||||||||| || ||||| |||||||||||||| |||||||| || Sbjct 449604 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTGCATGAT 449555 >seq155 Length=76293 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || || ||||| || |||||||| || || || Sbjct 26932 CCACCACGCAGGCGGAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 26873 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || || Sbjct 26872 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 26813 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||| ||| ||||||||||| | || || || Sbjct 26812 ATACCCTCCTTGTCCTGGATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCCACC 26753 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || ||||| |||||||| ||||| |||||||| Sbjct 26752 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAAAATCTGCAT 26706 >seq1 Length=3302357 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || || ||||| || |||||||| || || || Sbjct 872086 CCACCACGCAGGCGGAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 872027 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || || Sbjct 872026 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 871967 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||| ||| ||||||||||| | || || || Sbjct 871966 ATACCCTCCTTGTCCTGGATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCCACC 871907 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || ||||| |||||||| ||||| |||||||| Sbjct 871906 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAAAATCTGCAT 871860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619784896440