Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq155 86.0 5e-12 seq1 86.0 5e-12 >seq155 Length=76293 Score = 86.0 bits (94), Expect = 5e-12 Identities = 118/161 (73%), Gaps = 3/161 (2%) Strand=Plus/Minus Query 33892 CAATCGAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTG 33951 |||| || ||| || | ||| || |||||||| ||||| || ||||||||| |||||| Sbjct 26940 CAAT-GATACCACCACGCAGGCGGAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTG 26882 Query 33952 TAATCTGCCAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTG 34010 || || | || || || |||| || | ||||||||||| || |||||||||||||| Sbjct 26881 TAGTCCGA-AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG 26823 Query 34011 ATCCACCGGCACGCTCTCTTTGTCCATAATTTTTTGCTTAA 34051 || || | | ||| |||||| || || ||||||| Sbjct 26822 GTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTAA 26782 >seq1 Length=3302357 Score = 86.0 bits (94), Expect = 5e-12 Identities = 118/161 (73%), Gaps = 3/161 (2%) Strand=Plus/Minus Query 33892 CAATCGAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTG 33951 |||| || ||| || | ||| || |||||||| ||||| || ||||||||| |||||| Sbjct 872094 CAAT-GATACCACCACGCAGGCGGAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTG 872036 Query 33952 TAATCTGCCAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTG 34010 || || | || || || |||| || | ||||||||||| || |||||||||||||| Sbjct 872035 TAGTCCGA-AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG 871977 Query 34011 ATCCACCGGCACGCTCTCTTTGTCCATAATTTTTTGCTTAA 34051 || || | | ||| |||||| || || ||||||| Sbjct 871976 GTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTAA 871936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397061301502054