Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq153 129 6e-25 seq2 125 7e-24 seq151 116 4e-21 seq155 114 1e-20 seq79 114 1e-20 seq1 114 1e-20 >seq153 Length=77323 Score = 129 bits (142), Expect = 6e-25 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||||| | |||||| || || | ||||| || || || |||||||| || | | Sbjct 48734 CCGCCGCGCAGGCGAAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 48675 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || |||||||||||||| | ||||| ||||||||||| || || Sbjct 48674 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGG 48615 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCA 64394 || ||||| || || || || || ||||| || || | || | ||| || |||| Sbjct 48614 ATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCAATGGTGT--CCGACGACTCCA 48557 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | ||||||||||| | || || |||||||| ||||| Sbjct 48556 CCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 48508 Score = 125 bits (138), Expect = 7e-24 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||||| || || | ||||| || || || |||||||| || | Sbjct 48507 ACCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 48448 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || |||||||||||||| | ||||| ||||||||||| || || Sbjct 48447 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGG 48388 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393 || ||||| || || || || || ||||| || || | |||| ||| || ||| Sbjct 48387 GATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTAT--CCGACGACTCC 48330 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | || | |||||||| || | || || |||||||| ||||| Sbjct 48329 ACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 48280 Score = 116 bits (128), Expect = 4e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||||| || || | ||||| || || || |||||||| || | Sbjct 48279 ACCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 48220 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | || || |||||||||||||| | ||||| ||||||||||| || || Sbjct 48219 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGG 48160 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393 || ||||| || || || || || ||||| || || | || | ||| || ||| Sbjct 48159 GATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGT--CCGACGACTCC 48102 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | || | ||||||||||| | || || || ||||| ||||| Sbjct 48101 ACCTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 48052 >seq2 Length=801100 Score = 125 bits (138), Expect = 7e-24 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | |||||| | || | ||||| || || || |||||||| || | Sbjct 378500 ACCACCGCGCAGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 378441 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || |||||||||||||| | ||||| ||||||||||| || || Sbjct 378440 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGG 378381 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393 || || || || || || || || ||||| || || | || | ||| || ||| Sbjct 378380 GATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGT--CCGACGACTCC 378323 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | || | |||||||||||| | || || |||||||| ||||| Sbjct 378322 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378273 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||||| | ||||| || || | ||||| || || || |||||||| || | | Sbjct 378727 CCGCCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 378668 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| |||| || |||||||||||||| | ||||| ||||||||||| || || Sbjct 378667 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGG 378608 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCA 64394 || || || || || || || || ||||| || || | || | ||| || |||| Sbjct 378607 ATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGT--CCGACGACTCCA 378550 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | ||||||||||| | || || |||||||| ||||| Sbjct 378549 CCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378501 Score = 116 bits (128), Expect = 4e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | |||||| | || | ||||| || || || |||||||| || | Sbjct 378272 ACCACCGCGCAGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 378213 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || |||||||||||||| | ||||| ||||||||||| || || Sbjct 378212 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGG 378153 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393 || || || || || || || || ||||| || || | || | ||| || ||| Sbjct 378152 GATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGT--CCGACGACTCC 378095 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | || | ||||||||||| | || || || ||||| ||||| Sbjct 378094 ACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 378045 >seq151 Length=1709611 Score = 116 bits (128), Expect = 4e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || || | ||||| || || || |||||||| || | Sbjct 449785 ACCACCACGCAGGCGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 449726 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || |||||||||||||| | ||||| ||||||||||| || || Sbjct 449725 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGG 449666 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393 ||| || || || || || || || ||||| || || | || | ||| || ||| Sbjct 449665 AATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCGATGGTGT--CCGACGACTCC 449608 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | || | ||||||||| || | || || |||||||| ||||| Sbjct 449607 ACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTGCAT 449558 >seq155 Length=76293 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || |||| ||||| || || || |||||||| || | Sbjct 26933 ACCACCACGCAGGCGGAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 26874 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || |||||||||||||| | || || ||||||||||| || || Sbjct 26873 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGG 26814 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||||| || || | || || | ||||| Sbjct 26813 GATACCCTCCTTGTCCTGGATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCCAC 26754 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||| || || |||||||| ||||| Sbjct 26753 CTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAAAATCTGCAT 26706 >seq79 Length=276002 Score = 114 bits (126), Expect = 1e-20 Identities = 234/336 (70%), Gaps = 19/336 (6%) Strand=Plus/Plus Query 115366 GCACGGTTTTCATGTTCACGAATTCGGCGACA-CTAGCAACGGCTGCACGTCCGCCGGCG 115424 |||||| || || || ||||| || ||||||| || | |||||||||||||| || ||| Sbjct 192971 GCACGGATTCCACGTGCACGAGTTTGGCGACAACTCG-AACGGCTGCACGTCGGCGGGCC 193029 Query 115425 AGCATTTCAACCCGTTTAACCAAGA-TCACGGCGCACCGAACGCACCCGTCCGCCACGTC 115483 ||| ||||||||||| || |||| |||||||| |||| || | ||||| || Sbjct 193030 CGCACTTCAACCCGTTCAA-GAAGACGCACGGCGCGCCGACGGCTGAGGAGCGCCATGTG 193088 Query 115484 GGTGATCTGGGCAACGTCGAATCTGCGGGCTTCAACTC--GC-TCACCGACGTCAACATG 115540 || || |||||||||||| ||| ||| | | | || || | || | ||| | || Sbjct 193089 GGCGACCTGGGCAACGTC--ATC-GCG---TCCGAGTCCGGCGTGGCCAAGGTCGAGATC 193142 Query 115541 ACGAGCGACT---TAATGACGTTGTACGGCCCGAACAGTGTGCTCGGCCGCAGCTTAGTG 115597 | ||||| ||||| ||| ||| | |||| || ||||||||| | | || Sbjct 193143 TC---CGACTCGCAGGTGACGCTGTTTGGCGAGCACAGCGTTATCGGCCGCACCATTGTT 193199 Query 115598 GTGCACGCGGACCGCGACGATCTCGGCCTTACCGATCATCCGCTAAGCAAAACCACGGGT 115657 ||||| || ||| |||||||| ||| || ||| ||| || || || ||| Sbjct 193200 GTGCATGCCGACGAGGACGATCTGGGCAAGGGCGGCCATGAGCTGTCCATCACTACCGGT 193259 Query 115658 AACTCGGGCGGGCGCCTGGCCTGCGGCATCATCGGC 115693 ||| | ||||| |||| |||||||||| |||| ||| Sbjct 193260 AACGCCGGCGGTCGCCAGGCCTGCGGCGTCATTGGC 193295 >seq1 Length=3302357 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || |||| ||||| || || || |||||||| || | Sbjct 872087 ACCACCACGCAGGCGGAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 872028 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || |||||||||||||| | || || ||||||||||| || || Sbjct 872027 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGG 871968 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||||| || || | || || | ||||| Sbjct 871967 GATACCCTCCTTGTCCTGGATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCCAC 871908 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||| || || |||||||| ||||| Sbjct 871907 CTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAAAATCTGCAT 871860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643382257880