Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq162 297 2e-75 seq160 181 1e-40 >seq162 Length=1352108 Score = 297 bits (328), Expect = 2e-75 Identities = 1094/1693 (65%), Gaps = 68/1693 (4%) Strand=Plus/Minus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCG-GTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 ||||| ||||||||| |||| || ||| || || ||| | || ||||| ||||| || | Sbjct 1304273 CCGACGCTGTTCAACTCGGGCACGCCGCGTCCCGCAGCTCTCGTCGTGCTTCCTTGTGGC 1304214 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | || ||| |||| || || | ||||| || |||| || ||| || || Sbjct 1304213 CATGTCGGATGACAGCATCGAGGGCATCTACGACACGCTGAAGGTGTGCGCGCAGATTTC 1304154 Query 94017 AAAATACGCGGGGGGAATCGGGAT-CA-GTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || |||| || || || ||| | || ||| || || | || || | ||| || ||| Sbjct 1304153 CAAGAACGCTGGCGGCATTGGGCTGCACGTGAGCA--ACATCCGGGCTACGGGCTCATAC 1304096 Query 94075 ATC-CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 || | || ||||| ||||| || ||||| || || || ||||| || || |||||||| Sbjct 1304095 ATTGCAGGGCACCAACGGCACGTCGAACGGGCTTGTGCCGATGCTGCGTGTGTTCAACAA 1304036 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | ||||||| ||||| |||||||| || | | || ||| | || ||| ||||||| Sbjct 1304035 CACGGCGCGGTACGTCGACCAGGGCGGCAACAAGCGGCCAGGTGCGTTTGCGATCTATCT 1303976 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| ||||| || || ||| || ||| | || ||||| |||||||||||||| || Sbjct 1303975 GGAGCCGTGGCATGCCGATGTGTTTGCGTTCCTGGATCTGCGCAAGAACCACGGCAAGGA 1303916 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | ||||| | ||||| ||||| || || ||| | || || || || ||||| || Sbjct 1303915 GGAGGTGCGGGCCCGCGACCTGTTCTATGCGCTGTGGATCCCGGATCTGTTCATGAAGCG 1303856 Query 94314 CGTCGAGAAAAACTCCGCC---TGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 |||| | | || | ||| || || || || | || ||||| || Sbjct 1303855 CGTC---ATTGCCGGCGGCAAGTGGTCGCTGTTCTGCCCGCACGAGGCACCCGGCATGCA 1303799 Query 94371 CGACGTTTGTG--GATCGCGTTTTGAAGACTTGTATGCTCGTTACG---AATCGCAGGGC 94425 || || || | ||| | | ||||| | | ||||| | |||| | ||| ||| Sbjct 1303798 GGAGGTGTGGGGCGAT-GAG-TTTGAGGCCCTGTATACCAAGTACGAGAACACGCCTGGC 1303741 Query 94426 AAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTG 94485 ||| | | || || || |||||||||| || |||| |||||| ||| | Sbjct 1303740 CTGGCGCGCTCGACCATCGACGCACAGAAGCTGTGGTATGCGATCCTGGACGCGCAGATC 1303681 Query 94486 GAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAG 94545 |||||||| | || | ||| ||| |||||| | |||| |||||| ||||||||| Sbjct 1303680 GAGACGGGGAACCCGTTCATGCTGTACAAGGATGCATGCAACCGCAAGTCGAACCAGCAG 1303621 Query 94546 CACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCG 94605 ||||||| ||||||| ||||||| |||||||| ||||| |||||||| | || Sbjct 1303620 AACCTCGGCACGATCAAGTGCTCGAACCTGTGCACAGAGATCGTCGAGTACTCGAGCCCC 1303561 Query 94606 GACGAGATTG-CTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAG-ATG 94663 |||||| | | ||||||| ||||||| || || ||| | | || || | || | Sbjct 1303560 GACGAGGTGGCCTGTGTGCAACCTGGCGTCGATTGCGCTGCCGTCGTTTGT-CAAGTCGG 1303502 Query 94664 CCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGG 94723 || || || ||| |||| || |||| || || | |||| ||| Sbjct 1303501 CCGAC-CGAGTACGACTTC----------CAGCAGCTGCACGACGTCAC--CAAGG-TGG 1303456 Query 94724 T---CTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGA 94780 | | ||||||||||| | | ||||||| ||||||||||| || || ||| | | | Sbjct 1303455 TCACCAAGAACCTGAACAAGATCATCGACATCAACTTCTACCCGGTGCCCGAGAC-GCGT 1303397 Query 94781 ACTCA--AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCT 94838 | || ||| || || || ||||||||||| || || ||||| | || || || | Sbjct 1303396 CCGCAGCAACATGCGCCACCGTCCCATCGGCATTGGAGTTCAGGGGCTGGCTGATGCCTT 1303337 Query 94839 GGTGATGATGCGTCTGCCCTACGACTCTGTC-GACGC-GGCGGGTTTGAATTTGAACATA 94896 | ||||| |||| | ||| || | | || || ||| | |||| ||| Sbjct 1303336 CCTCGCCATGCGCATGCCGTTCGAGTCGGCCTGAGGCACGCGAG-CTGAACCGCGCCATC 1303278 Query 94897 TTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGC 94956 ||||| | ||| || | | ||| | | | |||| | || | | |||| Sbjct 1303277 TTCGAGACCATCTACCATGCGGCGCT----CGAGGCGTC------GTGTGAGCTGGCGGC 1303228 Query 94957 GGGCCAC-------ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTT 95009 | |||| |||| ||| || || || || |||||| | ||| Sbjct 1303227 CGTCCACGGCGCCTACGAGACGTACCAGGGCAGCCCGATGTCGAAGGGCAAGCTGCAGCC 1303168 Query 95010 CGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGT 95069 || || ||||| ||| ||| |||| | | |||||||| || || || || | || Sbjct 1303167 GGATCTGTGGGGCGTGGCGCCGTCGGACCGCTGGGACTGGGACGCGCTCCGGGCCAAGGT 1303108 Query 95070 TATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGC 95129 | ||||| ||| ||| ||||||||||||||||||||||||| || || || | Sbjct 1303107 GCGGGAGCACGGCGTGCGCAACTCGCTGCTTGTGGCCCCCATGCCCACAGCGTCGACATC 1303048 Query 95130 GCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCG 95189 ||||||||| ||| |||||||| || || || | ||| |||||| | |||| | || Sbjct 1303047 GCAGATCCTCGGCTTCAACGAGTGCTTTGAGCCGTACACGTCCAACATCTACACGCGCCG 1302988 Query 95190 GGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCT 95249 || || ||||| || |||| || ||||| || || || |||||||| | | Sbjct 1302987 CGTCCTGGCCGGCGAGTTCCAGGTGGTCAACCAGTGGCTGCTGCGGGACCTCGTGGACCG 1302928 Query 95250 GGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCT--ACGC-GCCAACGGCTCCGTCCA 95306 || ||||| |||| | | | ||| | ||| || |||||||| || || || Sbjct 1302927 CGGGCTGTGGAACGACACG---ATGCGCCAGCGGCTTATTGCGGCCAACGGTTCGGTGCA 1302871 Query 95307 GAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCC 95366 | | | | | || |||||| | ||| || |||||||||||| |||||| Sbjct 1302870 GCAGCTGGACGAGGTTCCCGAGGACCTGAAGCGCCTGCACAAGACCGTGTATGAGATCAA 1302811 Query 95367 GCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNN 95426 |||| || || | ||| ||||| | || || ||| ||| |||||| Sbjct 1302810 GCAGAAGGTCATCATTGACATGGCGGCGGATCGTGGCGCCTACATTGACCAGAGCCAGTC 1302751 Query 95427 NNNNNNNNNNNNNATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGG 95486 |||| || ||||| | || | ||||| ||| |||||||| Sbjct 1302750 GCTGAACATCCACATGGACGGGCCCAACTACCAGAAGCTGACGTCGATGCATTTCTACGG 1302691 Query 95487 GTGGAGAAAGGGTCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTC 95546 |||| ||||| || |||||||| ||||| || |||| |||| ||| ||| ||| | Sbjct 1302690 CTGGAAGAAGGGGCTGAAGACCGGCATGTACTACCTGCGCACCAAGCCGGCGGCCGACGC 1302631 Query 95547 CATACAGTTCGCC 95559 || ||||| || Sbjct 1302630 GATCAAGTTCACC 1302618 >seq160 Length=71855 Score = 181 bits (200), Expect = 1e-40 Identities = 864/1359 (64%), Gaps = 58/1359 (4%) Strand=Plus/Minus Query 94222 TTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTAC 94281 ||| | || ||||| |||||||||||||| || || | ||||| | ||||| ||||| Sbjct 71853 TTCCTGGATCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGGGCCCGCGACCTGTTCTAT 71794 Query 94282 GCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTC-- 94339 || || ||| | || || || || ||||| |||||| | | || | | ||| Sbjct 71793 GCGCTGTGGATCCCGGATCTGTTCATGAAGCGCGTC---ATTGCCGGCGGCAAGTGTCGC 71737 Query 94340 TTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGG--ATCGCGTTTTGAAGA 94397 | || || || | || ||||| || || || || || || | |||| || | Sbjct 71736 TGTTCTGCCCGCACGAGGCACCCGGCATGCAGGAGGTGTGGGGCGAT-GAGTTT-GAGGC 71679 Query 94398 CTTGTATGCTCGTTACGAAT---CGCAGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAA 94454 | ||||| | ||||| ||| ||| ||| | | || || || ||| Sbjct 71678 CCTGTATACCAAGTACGAGAACACGCCTGGCCTGGCGCGCTCGACCATCGACGCACAGAA 71619 Query 94455 GCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAA 94514 ||||||| || |||| |||||| ||| | |||||||| | || | ||| ||| ||| Sbjct 71618 GCTGTGGTATGCGATCCTGGACGCGCAGATCGAGACGGGGAACCCGTTCATGCTGTACAA 71559 Query 94515 GGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCT 94574 ||| | |||| |||||| ||||||||| ||||||| ||||||| ||||||| || Sbjct 71558 GGATGCATGCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGATCAAGTGCTCGAACCT 71499 Query 94575 GTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTC 94634 |||||| ||||| |||||||| | || |||||| | |||||||| ||||||| || Sbjct 71498 GTGCACAGAGATCGTCGAGTACTCGAGCCCCGACGAGGTGGCTGTGTGCAACCTGGCGTC 71439 Query 94635 CATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGA 94694 || ||| | | || || | || || || || ||| |||| | | ||| | Sbjct 71438 GATTGCGCTGCCGTCGTTTGT-CAAGTCGCG-AC-CGAGTACGACTTCCAGC-AGCTGCA 71383 Query 94695 GGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT---GAACCTGAACAGGGTAATCGACAA 94751 || || | | |||| ||||| ||||||||||| | | ||||||| Sbjct 71382 CGAC---GTCACC--------AAGG-TGGTCACCAAGAACCTGAACAAGATCATCGACAT 71335 Query 94752 GAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCAT 94811 ||||||||||| || || ||| || | ||| || ||| || ||||||||||| Sbjct 71334 CAACTTCTACCCGGTGCCCGAGACGCGTCGCAGCAACATGC-GCACCGTCCCATCGGCAT 71276 Query 94812 CGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGA 94871 || || ||||| | || || || | | ||||| |||| | ||| || | || Sbjct 71275 TGGAGTTCAGGGGCTGGCTGATGCCTTCCTCGCCATGCGCATGCCGTTCGAGTCGGCTGA 71216 Query 94872 CGCG-GCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGAAACAAT 94930 || ||| | | ||| ||| ||||| | ||| || | | ||| | | | Sbjct 71215 GGCACGCGAGCT-GAACCGCGCCATCTTCGAGACCATCTACCATGCGGCGCT----CGAG 71161 Query 94931 CCGTCCACTTGGCCAGATCGGACGGCGGGCCAC-------ACGAATCGTTCCGCGGATCG 94983 |||| | || | | |||| | |||| |||| ||| || || Sbjct 71160 GCGTCGTGT------GAGCTGGCGGCCGTCCACGGCGCCTACGAGACGTACCAGGGCAGC 71107 Query 94984 CCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTAC 95043 || || |||||| | ||| || || ||||| ||| ||| |||| | | Sbjct 71106 CCGATGTCGAAGGGCAAGCTGCAGCCGGATCTGTGGGGCGTGGCGCCGTCGGACCGCTGG 71047 Query 95044 GACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTG 95103 |||||||| || || || || | || | ||||| ||| ||| ||||||||||| Sbjct 71046 GACTGGGACGCGCTCCGGGCCAAGGTGCGGGAGCACGGCGTGCGCAACTCGCTGCTTGTG 70987 Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 |||||||||||||| || || || |||||||||| ||| |||||||| || || || Sbjct 70986 GCCCCCATGCCCACAGCGTCGACATCGCAGATCCTCGGCTTCAACGAGTGCTTTGAGCCG 70927 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 | ||| |||||| | |||| | || || || ||||| || |||| || ||||| || Sbjct 70926 TACACGTCCAACATCTACACGCGCCGCGT-CTGGCCGGCGAGTTCCAGGTGGTCAACCAG 70868 Query 95224 CACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTG 95283 || || |||||||| | | || ||||| |||| | | | ||| | | Sbjct 70867 TGGCTGCTGCGGGACCTCGTGGACCGCGGGCTGTGGAACGACACG---ATGCGCCAGCGG 70811 Query 95284 CT--ACGC-GCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCG 95340 || || |||||||| || || ||| | | | | || |||||| | ||| Sbjct 70810 CTTATTGCGGCCAACGGTTCGGTGCAGCAGCTGGACGAGGTTCCCGAGGACCTGAAGCGC 70751 Query 95341 CTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGC 95400 || |||||||||||| |||||| |||| || || | ||| ||||| | || Sbjct 70750 CTGCACAAGACCGTGTATGAGATCAAGCAGAAGGTCATCATTGACATGGCGGCGGATCGT 70691 Query 95401 GGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCCGAGCCCAGTCGCGGA 95460 || ||| ||| |||||| |||| || ||||| | Sbjct 70690 GGCGCCTACATTGACCAGAGCCAGTCGCTGAACATCCACATGGACGGGCCCAACTACCAG 70631 Query 95461 AAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTATGTATTAT 95520 || | ||||| ||| |||||||| |||| ||||| || |||||||| ||||| || Sbjct 70630 AAGCTGACGTCGATGCATTTCTACGGCTGGAAGAAGGGGCTGAAGACCGGCATGTACTAC 70571 Query 95521 TTGCGAACCAGGCCAAAGGCGGACTCCATACAGTTCGCC 95559 |||| |||| ||| ||| ||| | || ||||| || Sbjct 70570 CTGCGCACCAAGCCGGCGGCCGACGCGATCAAGTTCACC 70532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721796222920