Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq162 176 6e-39 seq160 161 1e-34 seq217 100 3e-16 >seq162 Length=1352108 Score = 176 bits (194), Expect = 6e-39 Identities = 1109/1749 (63%), Gaps = 61/1749 (3%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || ||||| ||||||| ||||||| | || | |||||| || | | Sbjct 1302652 CGCAGGTAGTACATGCCGGTCTTCAGCCCCTTCTTCCAGCCGTAGAAATGCATCGACGTC 1302711 Query 115618 AACTTGGAG-AGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 115676 | ||| | ||| | || | |||||| || ||||| ||| || || ||| | Sbjct 1302712 AGCTTCTGGTAGT-TGGGCCCGTCCATGTGGATGTTCAGCGACTGGCTCTGGTCAATGTA 1302770 Query 115677 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCT 115736 | || |||||||||||||| ||||| | ||||| |||||| || |||| || | Sbjct 1302771 GGCGCCACGATCCGCCGCCATGTCAATGATGACCTTCTGCTTGATCTCATACACGGTCTT 1302830 Query 115737 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTT 115796 || ||| ||| | || || || | || | | | || | || || ||| Sbjct 1302831 GTGCAGGCGCTTCAGGTCCTCGGGAACCTCGTCCAGCTGCTGCACCGAACCGTTGGCCG- 1302889 Query 115797 GACCATGAGATCCT------TCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTC 115850 | || || || || | || || ||| || || | | ||| ||| Sbjct 1302890 --CAATAAGCCGCTGGCGCATCGTGTCGTT---CCACAGCCCGCGGTCCACGAGGTCCCG 1302944 Query 115851 CACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910 || || || ||||| || ||||| || || ||| ||| | | |||||||| Sbjct 1302945 CAGCAGCCACTGGTTGACCACCTGGAACTCGCCGGCCAGGACGCGGCGCGTGTAGATGTT 1303004 Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970 || |||||| |||||||||||||| ||| || | ||| || | ||| || |||||||| Sbjct 1303005 GGACGTGTACGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGCGATGTCGACGCTGTGGG 1303064 Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTT--CCTTGAGG 116028 |||||| |||| || || |||||| | || | ||| | | || || ||| Sbjct 1303065 CATGGGGGCCACAAGCAGCGAGTTGCGCACGCCGTGCTCCCGCA--CCTTGGCCCGGAGC 1303122 Query 116029 GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCT 116088 ||||||||||| || | | | | || | |||||| ||| ||| || | || Sbjct 1303123 GCGTCCCAGTCCCAGCGGTCCGACGGCGCCACGCCCCACAGATCCGGCTGCAGCTTGCCC 1303182 Query 116089 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAG 116148 | ||| || |||| | ||||| || | ||| | || |||||| || | Sbjct 1303183 TTCGACATCGGGCTGCCCTGGTACGTCTCGTAGGCGCCGTGGACGGCCGCCAGCTCACAC 1303242 Query 116149 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAAT-GCGAGCATTCA--TTGCCTTG 116205 ||||||||| || || || || || ||||| || || ||| | |||| | || | Sbjct 1303243 GACGCCTCGAGCGCCGCATGGTAGATGGTCTCGAAGATGGCGCG-GTTCAGCTCGCGT-- 1303299 Query 116206 GCCTC-GTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGAC 116264 ||||| | | || || |||| | || | || |||| || || || || || Sbjct 1303300 GCCTCAGGCCGACTCGAACGGCATGCGCATGGCGAGGAAGGCATCAGCCAGCCCCTGAAC 1303359 Query 116265 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATA 116321 || | ||| || || || || | ||| || || || ||||| ||| || || Sbjct 1303360 TCCAATGCCGATGGGACGGTGGCGCATGTT--GCTGCGGACGCGTCTCGGGCACCGGGTA 1303417 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 || || | ||||| | | | || || || |||||||| ||||| |||| || || || Sbjct 1303418 GAAGTTGATGTCGATGATCTTGTTCAGGTTCTTGGTGACCACCTTGGTGACGTCGTGCAG 1303477 Query 116382 CTTTTCGTAATCAAAACTGCGAGTC-TCTTCATTGACATACTTAGGAAGGGCGATTGACG 116440 || | | | || ||| || ||| | |||||| || || || || || |||| Sbjct 1303478 CTGCTGGAAGTC-GTACT-CG-GTCGGCCGACTTGACAAACGACGGCAGCGCAATCGACG 1303534 Query 116441 CCAGATTACACACAGAGGTCTCATCCT----TATCAGTGTACTCTATAATTTCCGTACAC 116496 |||| || ||||| ||| | | || | || | |||||| | || || || ||| Sbjct 1303535 CCAGGTTGCACAC--AGGCCACCTCGTCGGGGCTC-GAGTACTCGACGATCTCTGTGCAC 1303591 Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556 | || || | ||| || ||||| | ||||| || || ||||| ||| || |||||| Sbjct 1303592 AGGTTCGAGCACTTGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCATGCATCC 1303651 Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-C 116615 ||||| ||||| | || |||||||||| | || | | || || || | ||| | | Sbjct 1303652 TTGTACAGCATGAACGGGTTCCCCGTCTCGATCTGCGCGTCCAGGATCGCATACCACAGC 1303711 Query 116616 ATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC---CTCCTCCTCGTACTTTGTGTAGAG 116672 || | | | | | || | | || | || | | ||||||||| || || || Sbjct 1303712 TTCTGTGCGTCG-ATGGTCGAGCGCGCCAGGCCAGGCGTGTTCTCGTACTTGGTATACAG 1303770 Query 116673 GGCCTCAAACTCTTC-ACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGA 116731 |||||||||||| || |||||| |||| | || ||||||| | || ||||| | Sbjct 1303771 GGCCTCAAACTCATCGCCCCACA-CCTCCTGCATGCCGGGTGCCTCGTGCGGGCAGAACA 1303829 Query 116732 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 116791 | ||||| | || || | || ||||||||||| || || |||||||| ||||| Sbjct 1303830 GCGACCACTTGCCGCCGGCAATGACGCGCTTCATGAACAGATCCGGGATCCACAGCGCAT 1303889 Query 116792 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 116851 |||| || || || || | || || | || || || |||| |||| || Sbjct 1303890 AGAACAGGTCGCGGGCCCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGATCCAGGAACG 1303949 Query 116852 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGAC----GA 116907 | | | ||| || |||||||| ||||| || | ||| | | | ||| || | Sbjct 1303950 CAAACACATCGGCATGCCACGGCTCCAGATAGATCGCAAACG-CACCTGGCCGCTTGTTG 1304008 Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCA 116967 || |||||| || |||| |||||| ||| || || || ||||| || | | || Sbjct 1304009 CCGCCCTGGTCGACGTACCGCGCCGTGTTGTTGAACACACGCAGCATCGGCACAAGCCCG 1304068 Query 116968 TCAGATTGGCCATTTGTCCCCCGAA---TACGAGACTTGTTGGCTCTGACATCGTGGATG 117024 | || ||| || || ||| | | || ||| | | || | || | | | | Sbjct 1304069 TTCGACGTGCCGTTGGTGCCCTGCAATGTATGAGCC--CGTAGCCCGGATGTTGCTCACG 1304126 Query 117025 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAG 117084 |||| ||||| || || || ||| || || || |||||| || | || || ||||| Sbjct 1304127 TGCAGCCCAATGCCGCCAGCGTTCTTGGAAATCTGCGCGCACACCTTCAGCGTGTCGTAG 1304186 Query 117085 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG-TGGCCT 117143 || || ||||| |||| || | || | |||||||| ||| | || || | Sbjct 1304187 ATGCCCTCGATGCTGTCATCCGACATGGCCACAAGGAAGCACGACGAGAGCTGCGGGACG 1304246 Query 117144 TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG-GGACATCT 117202 || || || | |||||| || || || | |||||| |||| | || ||| ||||| Sbjct 1304247 CGGCGTGCCCGAGTTGAACAGCGTCGGCGACGCGTGCGTGAAGA-ACTTTGACGACATGA 1304305 Query 117203 TATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCA 117262 | ||| ||||| | | | | |||||| ||||| || || | || || |||| Sbjct 1304306 GGTTGTACGTCTCGATCGCCGCGTCAATGTCCGAGCCGTGGATGCCCAGGGACACGCGCA 1304365 Query 117263 TAAACATGT 117271 | | || || Sbjct 1304366 TCACCAGGT 1304374 >seq160 Length=71855 Score = 161 bits (178), Expect = 1e-34 Identities = 812/1267 (64%), Gaps = 44/1267 (3%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || ||||| ||||||| ||||||| | || | |||||| || | | Sbjct 70566 CGCAGGTAGTACATGCCGGTCTTCAGCCCCTTCTTCCAGCCGTAGAAATGCATCGACGTC 70625 Query 115618 AACTTGGAG-AGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 115676 | ||| | ||| | || | |||||| || ||||| ||| || || ||| | Sbjct 70626 AGCTTCTGGTAGT-TGGGCCCGTCCATGTGGATGTTCAGCGACTGGCTCTGGTCAATGTA 70684 Query 115677 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCT 115736 | || |||||||||||||| ||||| | ||||| |||||| || |||| || | Sbjct 70685 GGCGCCACGATCCGCCGCCATGTCAATGATGACCTTCTGCTTGATCTCATACACGGTCTT 70744 Query 115737 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTT 115796 || ||| ||| | || || || | || | | | || | || || ||| Sbjct 70745 GTGCAGGCGCTTCAGGTCCTCGGGAACCTCGTCCAGCTGCTGCACCGAACCGTTGGCCG- 70803 Query 115797 GACCATGAGATCCT------TCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTC 115850 | || || || || | || || ||| || || | | ||| ||| Sbjct 70804 --CAATAAGCCGCTGGCGCATCGTGTCGTT---CCACAGCCCGCGGTCCACGAGGTCCCG 70858 Query 115851 CACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910 || || || ||||| || ||||| || || || ||| | | |||||||| Sbjct 70859 CAGCAGCCACTGGTTGACCACCTGGAACTCGCCGGCCAGAC-GCGGCGCGTGTAGATGTT 70917 Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970 || |||||| |||||||||||||| ||| || | ||| || | ||| || |||||||| Sbjct 70918 GGACGTGTACGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGCGATGTCGACGCTGTGGG 70977 Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTT--CCTTGAGG 116028 |||||| |||| || || |||||| | || | ||| | | || || ||| Sbjct 70978 CATGGGGGCCACAAGCAGCGAGTTGCGCACGCCGTGCTCCCGCA--CCTTGGCCCGGAGC 71035 Query 116029 GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCT 116088 ||||||||||| || | | | | || | |||||| ||| ||| || | || Sbjct 71036 GCGTCCCAGTCCCAGCGGTCCGACGGCGCCACGCCCCACAGATCCGGCTGCAGCTTGCCC 71095 Query 116089 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAG 116148 | ||| || |||| | ||||| || | ||| | || |||||| || | Sbjct 71096 TTCGACATCGGGCTGCCCTGGTACGTCTCGTAGGCGCCGTGGACGGCCGCCAGCTCACAC 71155 Query 116149 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA-TTCA--TTGCCTTG 116205 ||||||||| || || || || || ||||| || ||| | || |||| | || | Sbjct 71156 GACGCCTCGAGCGCCGCATGGTAGATGGTCTCGAAGATG-GCGCGGTTCAGCTCGCGT-- 71212 Query 116206 GCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACA 116265 ||||| | || || |||| | || | || |||| || || || || || Sbjct 71213 GCCTCAGCCGACTCGAACGGCATGCGCATGGCGAGGAAGGCATCAGCCAGCCCCTGAACT 71272 Query 116266 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAA 116322 || | ||| || || || || | ||| || | ||| ||||| ||| || || Sbjct 71273 CCAATGCCGATGGGACGGTG-CGCATGTTGC---TGCGACGCGTCTCGGGCACCGGGTAG 71328 Query 116323 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 116382 || || | ||||| | | | || || || |||||||| ||||| |||| || || ||| Sbjct 71329 AAGTTGATGTCGATGATCTTGTTCAGGTTCTTGGTGACCACCTTGGTGACGTCGTGCAGC 71388 Query 116383 TTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 116442 | | | | || | || || ||| | | |||||| || || || || || |||||| Sbjct 71389 TGCTGGAAGTCGTA-CT-CG-GTCGCGAC-TTGACAAACGACGGCAGCGCAATCGACGCC 71444 Query 116443 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 116502 || || ||||||| ||| || | |||||| | || || || |||| || Sbjct 71445 AGGTTGCACACAGCCACCTCGTCGGGGCTCGAGTACTCGACGATCTCTGTGCACAGGTTC 71504 Query 116503 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAG 116562 || | ||| || ||||| | ||||| || || ||||| ||| || ||||||||||| Sbjct 71505 GAGCACTTGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCATGCATCCTTGTAC 71564 Query 116563 AGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGC 116621 ||||| | || |||||||||| | || | | || || || | ||| | | || | Sbjct 71565 AGCATGAACGGGTTCCCCGTCTCGATCTGCGCGTCCAGGATCGCATACCACAGCTTCTGT 71624 Query 116622 GGCTGGCACAGTGGCGTTGGCTCGCCC---CTCCTCCTCGTACTTTGTGTAGAGGGCCTC 116678 | | | | || | | || | || | | ||||||||| || || |||||||| Sbjct 71625 GCGTCG-ATGGTCGAGCGCGCCAGGCCAGGCGTGTTCTCGTACTTGGTATACAGGGCCTC 71683 Query 116679 AAACTCTTC-ACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACC 116737 |||||| || |||||| |||| | || ||||||| | || ||||| || ||| Sbjct 71684 AAACTCATCGCCCCACA-CCTCCTGCATGCCGGGTGCCTCGTGCGGGCAGAACAGCGACA 71742 Query 116738 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 116797 ||| || || | || ||||||||||| || || |||||||| ||||| |||| | Sbjct 71743 CTTG-CCGCCGGCAATGACGCGCTTCATGAACAGATCCGGGATCCACAGCGCATAGAACA 71801 Query 116798 GATCCCG 116804 | || || Sbjct 71802 GGTCGCG 71808 >seq217 Length=908848 Score = 100 bits (110), Expect = 3e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| || |||||||| ||| |||| || || ||||||||| ||| || Sbjct 400064 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGGCAGATCAGCTCGTTCGAGAAGGTCAGTCCA 400123 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| || || |||||||| | |||||| |||| ||| ||||| ||||||||||| Sbjct 400124 GGCATCAGGCCGCGCTTCTTGAGCCAGAAGATCGACGCAAACGAGCCCGAGAAGAAGATG 400183 Query 127640 CCCTCCAC 127647 ||||| || Sbjct 400184 CCCTCGAC 400191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505459173320