Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq217 230 4e-55 seq162 165 1e-35 seq160 161 2e-34 >seq217 Length=908848 Score = 230 bits (254), Expect = 4e-55 Identities = 583/881 (66%), Gaps = 7/881 (1%) Strand=Plus/Plus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | |||||| ||||||||| |||||||||||||||| ||| || || Sbjct 399769 CTTCTGGTAGTCCGACACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCATCGAGATCAT 399828 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 |||||||| |||| ||||| | | | ||| |||| || || ||||| |||| Sbjct 399829 GTCCATGAAGTCGAAGGGGTTGGTGGCCAGGTAGTGCTTGGGCTGGCCCAGAGCGACCAG 399888 Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG 159807 || | ||| || ||||| ||||| || ||||| ||| ||| || || | ||| Sbjct 399889 CAGGCGGTCAGCAACAAACTCGATATACTGGCACATGAGCTTGGCGTTCATGCCGATCAG 399948 Query 159808 CCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT 159867 ||||| ||||| || ||||| ||||||| ||| || ||| || ||||| | || Sbjct 399949 TGACACGGGCAGCGCCTCGGACAGGAACTCCTGCTCGATGGTGACAGCCTCGGTGATGAT 400008 Query 159868 CTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGC 159927 ||| || ||| ||||| | | | |||| | ||||| | ||| || Sbjct 400009 CTGGAGGATGACCTCGGCGGCCGGCGGGGACTGCAGGTGG---TGGAACAGCACGCAGGC 400065 Query 159928 AAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGG 159987 |||||| |||||| |||||||| || |||| | |||||| || | | | || || || Sbjct 400066 AAAGTCCGTGTGCAGGCCCTCGTCGCGGCAGATCAGCTCGTTCGAGAAGGTCAGTCCAGG 400125 Query 159988 CATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCC 160047 ||| | || ||| |||||||| || || | |||||| | || || ||||| || Sbjct 400126 CATCAGGCCGCGCTTCTTGAGCCAGAAGATCGACGCAAACGAGCCCGAGAAGAAGATGCC 400185 Query 160048 CTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCA 160107 ||| || |||||||| ||||| || | | | || || ||| | | || || | |||| Sbjct 400186 CTCGACCGCCGCAAAGGCCACCAGGCGCACGCCGAACTTGGCCTCGCGGTTATCGATCCA 400245 Query 160108 CCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAA 160167 | ||||| || |||||||| ||||||||| ||| |||| |||| ||||| Sbjct 400246 GCGAAGCGCCCAGTCGGCCTTCTTGCGGATGCACGGGATGTTGTCGATAGCGTGGAACAA 400305 Query 160168 TCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGC 160227 ||| ||||||| || ||| || |||| ||| ||||||| | || | Sbjct 400306 AAAGTCGCGCTCCTTGGGGTCGCGGATGTACGTGTCAATGAGCAGCGAGTACGTCTCCGA 400365 Query 160228 GTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCAC 160287 ||| | || || || |||||| ||| |||||| | |||||| | ||| || Sbjct 400366 GTGGATGTTCTCAATCATCATCTGGAAGCCGTAGAACGACCGCGCCTCGGGGATCTGAAC 400425 Query 160288 CTCCTGTG-TGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGA 160346 || | ||| | || | || |||| || | || || | ||||| | ||| ||||||| Sbjct 400426 CT-CGGTGCTAAAGTTCTGCACCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGCAAAGA 400484 Query 160347 AAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTG 160406 | || | ||||| ||| || || | ||||| | ||| || | || |||||||| Sbjct 400485 ACGCGAGCACGTACTTGATAAAGTGACGCTCGTTGTCGTTCAGGCGGTTGTCCCAGTGGC 400544 Query 160407 TCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCT-GAGCAGTTTTG 160465 || ||| || | || || | || || || |||| | |||| | || | ||| Sbjct 400545 CCATGTCCTGCGACAGGTCGATTTCCTCGGCCGTCCAGAACGACGCCTCGTGC-TTCTTG 400603 Query 160466 TACATGGCCCAGATGGCGTGCTCTCTGATCGGAAAAGTGAC 160506 ||||| ||||||| |||| | ||||||| || |||| Sbjct 400604 TACATCTCCCAGATCTCGTGGTACTTGATCGGGAACATGAC 400644 >seq162 Length=1352108 Score = 165 bits (182), Expect = 1e-35 Identities = 334/486 (69%), Gaps = 10/486 (2%) Strand=Plus/Plus Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908 ||||||| || |||| | || ||| || | | ||| ||||||||||||||||| || Sbjct 1302619 GTGAACTTGATCGCGTCGGCCGCCGGCTTGGTGCGCAGGTAGTACATGCCGGTCTTCAGC 1302678 Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATG 203968 ||||||| ||| ||||| | ||||| || | ||| || |||||| || ||||| Sbjct 1302679 CCCTTCTTCCAGCCGTAGAAATGCATCGACGTCAGCTTCTGGTAGTTGGGCCCGTCCATG 1302738 Query 203969 TGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGAT 204027 || |||||||| |||||||| ||||| ||| ||||||| ||||| || ||||| | || Sbjct 1302739 TGGATGTTCAGCGACTGGCTCTGGTCAATG-TAGGCGCCACGATCCGCCGCCATGTCAAT 1302797 Query 204028 AATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA--CGTCTCTGGTGTGTTGAGGC 204085 ||| ||||||| ||||| |||| |||||| || || || | || | || Sbjct 1302798 GATGACCTTCTGCTTGATCTCATACACGGTCTTGTGCAGGCGCTTCAG--GTCCTCGGGA 1302855 Query 204086 ACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTC 204144 || || | ||| | ||| | ||| |||||| | || || || | | | | || || Sbjct 1302856 ACCTCGT-CCAGCTGCTGCACCGAACCGTTGGCCGCAATAAGCCGCTGGCGCATCGTGTC 1302914 Query 204145 CCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGT 204203 ||||| |||| | | || ||||||| ||| |||||| | ||| || | Sbjct 1302915 GTTCCACA-GCCCGCGGTCCACGAGGTCCCGCAGCAGCCACTGGTTGACCACCTGGAACT 1302973 Query 204204 CTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGT 204263 | |||| ||| || | || ||| | | |||| ||| | || || || ||||||| Sbjct 1302974 CGCCGGCCAGGACGCGGCGCGTGTAGATGTTGGACGTGTACGGCTCAAAGCACTCGTTGA 1303033 Query 204264 TGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCA 204323 ||||| ||||| | || || ||||||||||| |||| ||||| |||||||||| Sbjct 1303034 AGCCGAGGATCTGCGATGTCGACGCTGTGGGCATGGGGGCCACAAGCAGCGAGTTGCGCA 1303093 Query 204324 CACCGT 204329 | |||| Sbjct 1303094 CGCCGT 1303099 Score = 159 bits (176), Expect = 6e-34 Identities = 473/720 (66%), Gaps = 11/720 (2%) Strand=Plus/Plus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||| |||||||| ||||||| ||| |||||| | | || | | ||||||||| || Sbjct 1303573 CTCGACGATCTCTGTGCACAGGTTCGAGCACTTGATCGTGCCGAGGTTCTGCTGGTTCGA 1303632 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002 ||||||||| || | |||||||||| ||||||||| | || |||| ||||| | Sbjct 1303633 CTTGCGGTTGCATGCATCCTTGTACAGCATGAACGGGTTCCCCGTCTCGATCTGCGCGTC 1303692 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCA-CGTAC-ATCCCTTGAGA- 205059 ||| || ||||| | | || || | || | | || | | || | | Sbjct 1303693 CAGGATCGCATACCACAGCTTCTGTGCGTCGA--TGGTCGAGCGCGCCAGGCCAGGCGTG 1303750 Query 205060 --CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGA 205117 |||||| || || ||||| ||| |||| ||| || |||| ||| || || || Sbjct 1303751 TTCTCGTACTTGGTATACAGGGCCTCAAACTCATCGCCCCACACCTCCTGCATGCCGGGT 1303810 Query 205118 CATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGG 205177 | | || || | ||| |||||| | || | | || | || ||| ||||| Sbjct 1303811 GCCTCGTGCGGGCAGAACAGCGACCACTTGCCGCCGGCAATGACGCGCTTCATGAACAGA 1303870 Query 205178 TCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTC 205237 || ||||||||| | || ||||| || ||||||| | | || | || ||||| Sbjct 1303871 TCCGGGATCCACAGCGCATAGAACAGGTCGCGGGCCCGCACCTCCTCCTTGCCGTGGTTC 1303930 Query 205238 TTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297 || || ||||| | || | ||||| ||||||||||| | | | || | Sbjct 1303931 TTGCGCAGATCCAGGAACGCAAACACATCGGCATGCCACGGCTCCAGATAGATCGCAAAC 1303990 Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357 || ||||||| |||||| || |||||||| || || | | | |||||| || ||| Sbjct 1303991 GCACCTGGCCGCTTGTTGCCGCCCTGGTCGACGTACCGCGCCGTGTTGTTGAACACACGC 1304050 Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGT-TGATGGCCGAGCCTTCAGC 205416 ||||||||||| || ||||| | || ||||| |||| | ||| ||||| ||| Sbjct 1304051 AGCATCGGCACAAGCCCGTTCGACGTGCCGTTGGTGCCCTGCAATGTATGAGCCCGTAGC 1304110 Query 205417 CCTCACGTTGGAGATG-GCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACT 205475 || | |||| | | || || ||||| ||||||| ||||| ||||| |||||| Sbjct 1304111 CCGGATGTTGCTCACGTGCAGC-CCAATGCCGCCAGCGTTCTTGGAAATCTGCGCGCACA 1304169 Query 205476 CTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACG 205535 | | ||| ||| ||||||||| ||||| || |||| || | ||| || |||||| Sbjct 1304170 CCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCATCCGACATGGCCACAAGGAAGCACG 1304229 Query 205536 AAGCCAGCTTGGCAAAGTTG-GTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAG 205594 | | |||| | | | | ||||||| || ||| ||||| || ||||| ||||| Sbjct 1304230 ACGAGAGCTGCGGGACGCGGCGTGCCCGAGTTGAACAGCGTCGGCGACGCGTGCGTGAAG 1304289 >seq160 Length=71855 Score = 161 bits (178), Expect = 2e-34 Identities = 334/486 (69%), Gaps = 11/486 (2%) Strand=Plus/Plus Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908 ||||||| || |||| | || ||| || | | ||| ||||||||||||||||| || Sbjct 70533 GTGAACTTGATCGCGTCGGCCGCCGGCTTGGTGCGCAGGTAGTACATGCCGGTCTTCAGC 70592 Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATG 203968 ||||||| ||| ||||| | ||||| || | ||| || |||||| || ||||| Sbjct 70593 CCCTTCTTCCAGCCGTAGAAATGCATCGACGTCAGCTTCTGGTAGTTGGGCCCGTCCATG 70652 Query 203969 TGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGAT 204027 || |||||||| |||||||| ||||| ||| ||||||| ||||| || ||||| | || Sbjct 70653 TGGATGTTCAGCGACTGGCTCTGGTCAATG-TAGGCGCCACGATCCGCCGCCATGTCAAT 70711 Query 204028 AATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA--CGTCTCTGGTGTGTTGAGGC 204085 ||| ||||||| ||||| |||| |||||| || || || | || | || Sbjct 70712 GATGACCTTCTGCTTGATCTCATACACGGTCTTGTGCAGGCGCTTCAG--GTCCTCGGGA 70769 Query 204086 ACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTC 204144 || || | ||| | ||| | ||| |||||| | || || || | | | | || || Sbjct 70770 ACCTCGT-CCAGCTGCTGCACCGAACCGTTGGCCGCAATAAGCCGCTGGCGCATCGTGTC 70828 Query 204145 CCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGT 204203 ||||| |||| | | || ||||||| ||| |||||| | ||| || | Sbjct 70829 GTTCCACA-GCCCGCGGTCCACGAGGTCCCGCAGCAGCCACTGGTTGACCACCTGGAACT 70887 Query 204204 CTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGT 204263 | |||| ||| || | || ||| | | |||| ||| | || || || ||||||| Sbjct 70888 CGCCGGCCAG-ACGCGGCGCGTGTAGATGTTGGACGTGTACGGCTCAAAGCACTCGTTGA 70946 Query 204264 TGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCA 204323 ||||| ||||| | || || ||||||||||| |||| ||||| |||||||||| Sbjct 70947 AGCCGAGGATCTGCGATGTCGACGCTGTGGGCATGGGGGCCACAAGCAGCGAGTTGCGCA 71006 Query 204324 CACCGT 204329 | |||| Sbjct 71007 CGCCGT 71012 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||| |||||||| ||||||| ||| |||||| | | || | | ||||||||| || Sbjct 71480 CTCGACGATCTCTGTGCACAGGTTCGAGCACTTGATCGTGCCGAGGTTCTGCTGGTTCGA 71539 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTG 204996 ||||||||| || | |||||||||| ||||||||| | || |||| ||||| Sbjct 71540 CTTGCGGTTGCATGCATCCTTGTACAGCATGAACGGGTTCCCCGTCTCGATCTG 71593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152943747120