Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq153 156 1e-32 seq2 143 6e-29 seq151 134 3e-26 seq155 125 2e-23 seq1 125 2e-23 >seq153 Length=77323 Score = 156 bits (172), Expect = 1e-32 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| |||||||||||||| |||| ||||||||| | | || | ||||| Sbjct 48263 AGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 48204 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| ||||||||||| || || ||||| ||| Sbjct 48203 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC 48144 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 48143 TGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCAAGGGTGATAGTC 48084 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||||||||| || Sbjct 48083 TTGCCGGTGAGGGTCTTCACAAAAATCTG 48055 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| |||||||||||||| |||| ||||||||| | | ||| | || || Sbjct 48719 AGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCGTCC 48660 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| ||||||||||| || || ||||| ||| Sbjct 48659 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC 48600 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 48599 TGAATCTTCTGCTTGACGTTGTCAATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTC 48540 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| ||||| || Sbjct 48539 TTGCCGGTGAGGGTCTTCACGAAAATCTG 48511 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| |||||||||||||| |||| ||||||||| | | || | || || Sbjct 48491 AGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 48432 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| ||||||||||| || || ||||| ||| Sbjct 48431 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC 48372 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||| ||| |||| ||| || | | || || || | ||||| ||| Sbjct 48371 TGAATCTTCTGCTTGACGTTGTCGATGGTATCCGACGACTCCACCTCGAGGGTGATAGTC 48312 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| ||||| || Sbjct 48311 TTGCCAGTGAGGGTCTTCACGAAAATCTG 48283 >seq2 Length=801100 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| |||||||||||||| |||| ||||||||| | | || | || || Sbjct 378256 AGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 378197 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| ||||||||||| || || || || ||| Sbjct 378196 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 378137 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 378136 TGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTC 378077 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||||||||| || Sbjct 378076 TTGCCGGTGAGGGTCTTCACAAAAATCTG 378048 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| |||||||||||||| |||| ||||||||| | | || | || || Sbjct 378712 AGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 378653 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| ||||||||||| || || || || ||| Sbjct 378652 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 378593 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 378592 TGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTC 378533 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| ||||| || Sbjct 378532 TTGCCGGTGAGGGTCTTCACGAAAATCTG 378504 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| |||||||||||||| |||| ||||||||| | | || | || || Sbjct 378484 AGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 378425 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| ||||||||||| || || || || ||| Sbjct 378424 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 378365 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 378364 TGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATGGTC 378305 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| ||||| || Sbjct 378304 TTGCCGGTGAGGGTCTTCACGAAAATCTG 378276 >seq151 Length=1709611 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| | | || | || || Sbjct 449769 AGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 449710 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| ||||||||||| || ||| || || ||| Sbjct 449709 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 449650 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 449649 TGGATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCAAGGGTGATGGTC 449590 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || ||||| || Sbjct 449589 TTGCCCGTAAGGGTCTTGACGAAAATCTG 449561 >seq155 Length=76293 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| | | || | || || Sbjct 26917 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 26858 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| || ||||||||||| || || || || ||| Sbjct 26857 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC 26798 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 26797 TGGATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 26738 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || ||||| || Sbjct 26737 TTGCCCGTCAGGGTCTTAACGAAAATCTG 26709 >seq1 Length=3302357 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| | | || | || || Sbjct 872071 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 872012 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| || ||||||||||| || || || || ||| Sbjct 872011 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC 871952 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 871951 TGGATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 871892 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || ||||| || Sbjct 871891 TTGCCCGTCAGGGTCTTAACGAAAATCTG 871863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178918171180209