Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq155 154 2e-32 seq1 154 2e-32 seq151 152 6e-32 seq153 150 2e-31 seq2 150 2e-31 >seq155 Length=76293 Score = 154 bits (170), Expect = 2e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||| || || ||||| |||| || Sbjct 26915 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 26856 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| |||| |||||||||||| | || | | |||||||||| Sbjct 26855 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 26796 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||||| ||| | | | | |||||| || ||||| || | |||||||| || Sbjct 26795 GATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTT 26736 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||||| || ||||| || || ||||| Sbjct 26735 GCCCGTCAGGGTCTTAACGAAAATCTGCAT 26706 >seq1 Length=3302357 Score = 154 bits (170), Expect = 2e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||| || || ||||| |||| || Sbjct 872069 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 872010 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| |||| |||||||||||| | || | | |||||||||| Sbjct 872009 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 871950 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||||| ||| | | | | |||||| || ||||| || | |||||||| || Sbjct 871949 GATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTT 871890 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||||| || ||||| || || ||||| Sbjct 871889 GCCCGTCAGGGTCTTAACGAAAATCTGCAT 871860 >seq151 Length=1709611 Score = 152 bits (168), Expect = 6e-32 Identities = 162/211 (77%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| || || ||||| |||| || Sbjct 449767 CACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 449708 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || | |||||||||||| | || | || |||||||||| Sbjct 449707 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTG 449648 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 |||||||| ||||| ||| | | | ||||| ||| ||||| || | |||||||| | Sbjct 449647 GATCTTCTGCTTGA-CGTTGTCGATGGTGTCCGACGACTCCACCTCAAGGGTGATGGTCT 449589 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| || || || || || || ||||| Sbjct 449588 TGCCCGTAAGGGTCTTGACGAAAATCTGCAT 449558 >seq153 Length=77323 Score = 150 bits (166), Expect = 2e-31 Identities = 176/235 (75%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||| ||||| || | | || | |||||| |||| || |||||| ||||| ||||| Sbjct 48741 TTAGTTGCCGCCGCGCAGGCGAAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTA 48682 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 ||| || |||||||| |||| |||||||||||||||||||| || | |||||||||||| Sbjct 48681 GTCCGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTC 48622 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCG 46538 | ||| | || ||||||||| ||||||| ||||| ||| | | | ||||| || Sbjct 48621 AGGCGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTGA-CGTTGTCAATGGTGTCCGACG 48563 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||| || | ||||| || ||||| || || || || || || || ||||| Sbjct 48562 ACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 48508 Score = 143 bits (158), Expect = 3e-29 Identities = 160/211 (76%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||| || || ||||| | || || Sbjct 48261 CACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTC 48202 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || | |||||||||||| | ||| | || ||||||||| Sbjct 48201 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTG 48142 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||||| ||| | | | ||||| ||| ||||| || | ||||| || | Sbjct 48141 AATCTTCTGCTTGA-CGTTGTCGATGGTGTCCGACGACTCCACCTCAAGGGTGATAGTCT 48083 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || || || ||||| || ||||| Sbjct 48082 TGCCGGTGAGGGTCTTCACAAAAATCTGCAT 48052 Score = 140 bits (154), Expect = 4e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||| || || ||||| |||| || Sbjct 48489 CACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTC 48430 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || | |||||||||||| | ||| | || ||||||||| Sbjct 48429 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTG 48370 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||||| ||| | | | || || ||| ||||| || | ||||| || | Sbjct 48369 AATCTTCTGCTTGA-CGTTGTCGATGGTATCCGACGACTCCACCTCGAGGGTGATAGTCT 48311 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || || || || || || ||||| Sbjct 48310 TGCCAGTGAGGGTCTTCACGAAAATCTGCAT 48280 >seq2 Length=801100 Score = 150 bits (166), Expect = 2e-31 Identities = 176/235 (75%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||| ||||| || | | || | |||||| |||| || |||||| ||||| ||||| Sbjct 378734 TTAGTTGCCGCCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTA 378675 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 ||| || || ||||| |||| |||||||||||||||||||| || | |||||||||||| Sbjct 378674 GTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTC 378615 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCG 46538 | ||| | || |||||||||| ||||||| ||||| ||| | | | ||||| || Sbjct 378614 AGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGA-CGTTGTCGATGGTGTCCGACG 378556 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||| || | ||||| || ||||| || || || || || || || ||||| Sbjct 378555 ACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378501 Score = 149 bits (164), Expect = 7e-31 Identities = 161/211 (76%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||| || |||||| ||||| |||||||| || || ||||| |||| || Sbjct 378254 CACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTC 378195 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || | |||||||||||| | ||| | || |||||||||| Sbjct 378194 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTG 378135 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||||| ||| | | | ||||| ||| ||||| || | ||||| || | Sbjct 378134 AATCTTCTGCTTGA-CGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTCT 378076 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || || || ||||| || ||||| Sbjct 378075 TGCCGGTGAGGGTCTTCACAAAAATCTGCAT 378045 Score = 149 bits (164), Expect = 7e-31 Identities = 161/211 (76%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||| || |||||| ||||| |||||||| || || ||||| |||| || Sbjct 378482 CACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTC 378423 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || | |||||||||||| | ||| | || |||||||||| Sbjct 378422 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTG 378363 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||||| ||| | | | ||||| ||| ||||| || | |||||||| | Sbjct 378362 AATCTTCTGCTTGA-CGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATGGTCT 378304 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || || || || || || ||||| Sbjct 378303 TGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236796136040