Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq217 394 9e-105 seq2 147 2e-30 seq155 143 3e-29 seq1 143 3e-29 seq151 140 3e-28 seq153 134 1e-26 seq79 114 1e-20 >seq217 Length=908848 Score = 394 bits (436), Expect = 9e-105 Identities = 589/827 (71%), Gaps = 12/827 (1%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || |||| || || || | ||| || || ||||||||| Sbjct 399791 TTCTCGAAGAAGTTGGTCTTGCCCTGCATCGAGATCATGTCCATGAAGTCGAAGGGGTTG 399850 Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCG 132744 | | ||||||||||| | ||| |||| ||||| | ||| || || |||||| Sbjct 399851 GTGGCCAGGTAGTGCTTGGGCTGGCCCAGAGCGACCAGCAGGCGGTCAGCAACAAACTCG 399910 Query 132745 ATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGT 132803 || || || ||||| | || || | | | || | ||| ||| |||||||| |||| Sbjct 399911 ATATACTGGCACATGAGCTTGGCGTTCATG-CCGATCAGTGACACGGGCAGCGCCTCGGA 399969 Query 132804 GAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCT 132863 || || |||||||||| ||| || ||||||| ||| | | | | | ||| Sbjct 399970 CAGGAACTCCTGCTCGATGGTGACAGCCTCGGTGATGATCTGGAGGATGACCTCGGCGGC 400029 Query 132864 CGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTC 132923 |||| | | || || | ||||| || ||| |||||||| |||| ||||||||| Sbjct 400030 CGGCGGGGACTGCAGGTGGTGGAACAGCACGCAGGCAAAGTCCGTGTGCAGGCCCTCGTC 400089 Query 132924 CCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCA 132983 | | | || || ||||| ||| |||| || ||||| |||||||| || |||||||| Sbjct 400090 GCGGCAGATCAGCTCGTTCGAGAAGGTCAGTCCAGGCATCAGGCCGCGCTTCTTGAGCCA 400149 Query 132984 AAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAG 133043 || || | || || |||||| ||||||| ||||||||| ||||| || |||||||| Sbjct 400150 GAAGATCGACGCAAACGAGCCCGAGAAGAAGATGCCCTCGACCGCCGCAAAGGCCACCAG 400209 Query 133044 GCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTC 133103 |||| |||||||| |||| || | | |||||||||| |||||||| |||||||| | Sbjct 400210 GCGCACGCCGAACTTGGCCTCGCGGTTATCGATCCAGCGAAGCGCCCAGTCGGCCTTCTT 400269 Query 133104 TTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACG 133163 || |||||| || | ||||| |||| |||||| ||| | || | || || Sbjct 400270 GCGGATGCACGGGATGTTGTCGATAGCGTGGAACAAA--AAGTCGCGCTCCTTGGGGTCG 400327 Query 133164 C--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATT 133221 | | ||| ||||| ||||| ||| ||| | |||||||| | |||||| || || Sbjct 400328 CGGATGTACGTGTCAATGAGCAGCGAGTACGTCTCCGAGTGGATGTTCTCAATCATCATC 400387 Query 133222 TGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA-CGCTCGAC 133280 || |||||||| || ||||||||||| | ||| || || | || ||| || || Sbjct 400388 TGGAAGCCGTAGAACGACCGCGCCTCGGGGATCTGAACCTC-GGTGCTAAAGTTCTGCAC 400446 Query 133281 CAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAA 133340 ||| || ||||||||||||||||| ||| || || || || ||||||| |||||| || Sbjct 400447 CAGGTTCTCGTTGACGATGCCGTCCGAGGCAGCAAAGAACGCGAGCACGTACTTGATAAA 400506 Query 133341 ATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCAC 133397 || |||||||||||||||| ||| ||||||| || | |||||| |||||||| | Sbjct 400507 GTGACGCTCGTTGTCGTTCAGGCGGTTGTCCCAGTGGCCCATGTCCTGCGACAGGTCGAT 400566 Query 133398 CTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCC 133444 |||||| | ||||| |||||||||||| || |||||||| |||| Sbjct 400567 TTCCTCGGCCGTCCAGAACGACGCCTCGTGCTTCTTGTACAT-CTCC 400612 >seq2 Length=801100 Score = 147 bits (162), Expect = 2e-30 Identities = 166/217 (76%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| |||| || ||| | | Sbjct 378273 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCG 378332 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | | |||| | || | || || | ||||| ||||| || |||||| |||| Sbjct 378333 GACACCATCGACAACG-TCAAGCAGAAGATTCAGGACAAGGAGGGCAT-CCCGCCTGACC 378390 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| ||||| || |||| ||||||||| ||||||| Sbjct 378391 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACA 378450 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| |||| ||||| |||||||| || Sbjct 378451 ACATCCAGAAGGAGTCGACTCTGCACTTGGTGCTTCG 378487 Score = 143 bits (158), Expect = 3e-29 Identities = 173/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || |||||| |||| || ||| | | Sbjct 378501 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 378560 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | | |||| | || | || || | ||||| ||||| || |||||| |||| Sbjct 378561 GACACCATCGACAACG-TCAAGCAGAAGATTCAGGACAAGGAGGGCAT-CCCGCCTGACC 378618 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| ||||| || |||| ||||||||| ||||||| Sbjct 378619 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACA 378678 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| |||| ||||| ||||||| || || | |||||| Sbjct 378679 ACATCCAGAAGGAGTCGACTCTGCACCTGGTGCTCCGCCTGCGCGGCGGC 378728 Score = 138 bits (152), Expect = 1e-27 Identities = 164/217 (76%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| || |||||| |||| || ||| | | Sbjct 378045 ATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 378104 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | | |||| | || | || || | ||||| ||||| || |||||| |||| Sbjct 378105 GACACCATCGACAACG-TCAAGCAGAAGATTCAGGACAAGGAGGGCAT-CCCGCCTGACC 378162 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| ||||| || |||| ||||||||| ||||||| Sbjct 378163 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACA 378222 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| |||| ||||| |||||||| || Sbjct 378223 ACATCCAGAAGGAGTCGACTCTGCACTTGGTGCTTCG 378259 >seq155 Length=76293 Score = 143 bits (158), Expect = 3e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| ||||||||| |||| || ||| | || Sbjct 26706 ATGCAGATTTTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 26765 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| | || |||| ||||| ||||| || ||| | ||||| Sbjct 26766 GACACCATCGATAACG-TTAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCA 26824 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| ||||| || |||| |||||||| |||||||| Sbjct 26825 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 26884 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| |||| || || ||||||| || Sbjct 26885 CATCCAGAAGGAGTCGACCCTTCACCTGGTGCTCCG 26920 >seq1 Length=3302357 Score = 143 bits (158), Expect = 3e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| ||||||||| |||| || ||| | || Sbjct 871860 ATGCAGATTTTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 871919 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| | || |||| ||||| ||||| || ||| | ||||| Sbjct 871920 GACACCATCGATAACG-TTAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCA 871978 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| ||||| || |||| |||||||| |||||||| Sbjct 871979 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 872038 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| |||| || || ||||||| || Sbjct 872039 CATCCAGAAGGAGTCGACCCTTCACCTGGTGCTCCG 872074 >seq151 Length=1709611 Score = 140 bits (154), Expect = 3e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| ||||||||| | || || ||| | | Sbjct 449558 ATGCAGATTTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCG 449617 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 449618 GACACCATCGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCA 449676 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| |||||||| |||||||| Sbjct 449677 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 449736 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| |||| ||||| | ||||| || Sbjct 449737 CATCCAGAAGGAGTCGACCCTGCACCTCGTGCTCCG 449772 >seq153 Length=77323 Score = 134 bits (148), Expect = 1e-26 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || |||||| |||| || ||| | | Sbjct 48508 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 48567 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | | |||| | || | || || | ||||| || || || |||||| |||| Sbjct 48568 GACACCATTGACAACG-TCAAGCAGAAGATTCAGGACAAGGAAGGCAT-CCCGCCTGACC 48625 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| ||||| || |||| ||||| ||| ||||||| Sbjct 48626 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCGGACTACA 48685 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| |||| ||||| ||||||| || || | |||||| Sbjct 48686 ACATCCAGAAGGAGTCGACTCTGCACCTGGTGCTTCGCCTGCGCGGCGGC 48735 Score = 129 bits (142), Expect = 6e-25 Identities = 162/217 (75%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || |||||| |||| || ||| | | Sbjct 48280 ATGCAGATTTTCGTGAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 48339 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 || | | | | |||| | || | || || | ||||| || || || |||||| |||| Sbjct 48340 GATACCATCGACAACG-TCAAGCAGAAGATTCAGGACAAGGAAGGCAT-CCCGCCTGACC 48397 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| ||||| || |||| ||||||||| ||||||| Sbjct 48398 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACA 48457 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| |||| ||||| ||||||| || Sbjct 48458 ACATCCAGAAGGAGTCGACTCTGCACCTGGTGCTCCG 48494 Score = 120 bits (132), Expect = 3e-22 Identities = 160/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| || |||||| | || || ||| | | Sbjct 48052 ATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCGTCG 48111 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | | |||| | || | || || | ||||| || || || |||||| |||| Sbjct 48112 GACACCATCGACAACG-TCAAGCAGAAGATTCAGGACAAGGAAGGCAT-CCCGCCTGACC 48169 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| ||||| || || | ||||||||| ||||||| Sbjct 48170 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACA 48229 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| |||| ||||| ||||||| || Sbjct 48230 ACATCCAGAAGGAGTCGACTCTGCACCTGGTGCTCCG 48266 >seq79 Length=276002 Score = 114 bits (126), Expect = 1e-20 Identities = 236/340 (69%), Gaps = 11/340 (3%) Strand=Plus/Minus Query 107472 ATTCCGATAATGCCGCACGCGAGCCGGCCGCCCGAGTTGCCGGTGGTCTTGCTCAACGGA 107531 || || || | |||||| || | || ||||| | ||| ||||| || || || | | Sbjct 193297 ATGCCAATGACGCCGCAGGCCTGGCGACCGCCGGCGTTACCGGTAGTGATGGACAGCTCA 193238 Query 107532 TGGTCGGTGAGGCCCAGATCGTCCCTGTCCGTGTGCACGACCAGACTCCGTCCGATGATG 107591 ||| || ||||||||||||| ||| | ||||| || | | || ||||| | | Sbjct 193237 TGGCCGCCCTTGCCCAGATCGTCCTCGTCGGCATGCACAACAATGGTGCGGCCGATAACG 193178 Query 107592 CTGTGCGGGCCGTACAAAGTCACGACGCCGTCCGTCAAGCTC-ACCTCGGTGA-GCGCGT 107649 |||||| ||| ||| ||||| ||| | | ||| |||| || | || | Sbjct 193177 CTGTGCTCGCCAAACAGCGTCACCTGCGAGTCGGAGAT-CTCGACCTTGGCCACGCCGGA 193119 Query 107650 CGCGGCCCGCCGACTTGAGGTTGCCCAGGTCGCCGACGTGCCTGATCTCGGC-GTCGGGC 107708 | ||| | ||| ||| ||||||||||||||| || || | ||| || ||||| | Sbjct 193118 CTCGGACG--CGA--TGACGTTGCCCAGGTCGCCCACATGGCGCTCCTCAGCCGTCGG-C 193064 Query 107709 GCGCCGTG-GTCGCGCTTCGTCGGGTTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCT 107767 |||||||| ||| ||| ||||||||| ||| ||| ||||||||||||||||| Sbjct 193063 GCGCCGTGCGTCTT-CTTGAACGGGTTGAAGTGCGGGCCCGCCGACGTGCAGCCGTTCGA 193005 Query 107768 CGCGTCGCCGAACTCGTGCACGTGGAAGCCGTGCAGGCCG 107807 |||||| ||||||||||||||||| |||||| |||| Sbjct 193004 GTTGTCGCCAAACTCGTGCACGTGGAATCCGTGCTTGCCG 192965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171380759680