Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq151 396 3e-105 seq195 233 2e-56 seq13 120 4e-22 >seq151 Length=1709611 Score = 396 bits (438), Expect = 3e-105 Identities = 773/1137 (68%), Gaps = 14/1137 (1%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||||| | ||||||||| || || | || ||||| ||||| ||||| |||||||| Sbjct 323660 TCACCCGACAGGATGGCGGCCTGCACGGCGGCTCCGTAGGCGACGGCCTCGTCGGGGTTG 323719 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 |||| || | ||| || || || || | || || | || | || | ||| Sbjct 323720 ATCGACTTGTCCAGCTCCTTGCCCGAGAAGTGGTCAGAGATCAGCTTCTGGACGCGGGGG 323779 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || ||||| |||||||| | |||||| || || ||||| || |||||||| ||| Sbjct 323780 ATACGGGTCGAGCCACCGACAAGAACGATCTCGGAGACGTTCGACTTGTCGATCTTGGAG 323839 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || ||||| || || || ||||||| |||| ||||| ||| Sbjct 323840 TCGCGCAGGACGCGGTCGACCGGGTCGATGGTCGAGCGGAACAGGTCCGCGCACAGCTCC 323899 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || ||||| || || || || ||||| || | ||| ||| | | ||| || || Sbjct 323900 TCGAAGCGCGCACGCGTGATCGAGGTGTAGAAGTCGATGCCCTCGAACAGCGAGTCGATC 323959 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || || | || || || | ||| || | || ||||| |||||||| || || || || Sbjct 323960 TCGATCGAGGTCTGGGCAGACGACGACAGGGTGCGCTTGGCGCGCTCGCAGGCAGTGCGC 324019 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | ||| || |||| || ||||| || || || || ||||| | || || || ||||| Sbjct 324020 AGACGGCGCAGGGAGCGGGGGTTGCCCGAGATGTCCTTCTTGTTCTTGCGCTTGAACTCC 324079 Query 7430 TCAGAGAAGTG-TCGA--AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 | ||||| | || ||| | | || || || |||||||| | || || || Sbjct 324080 TGGACAAAGTGGTTGACCAGGCGGTTG---TCAAAGTCCTCACCACCAAGATGGGTGTCA 324136 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || || || || ||||| || ||||| || | || || | || ||| |||||||| Sbjct 324137 CCAGCAGTGGCCTTGACCTCGAAGATGCCGTCCTCGATCGACAGCAGCGACACATCAAAG 324196 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGA 7606 ||||| || ||||| || |||||||| | |||| | ||| |||| | ||||| || ||| Sbjct 324197 GTACCGCCTCCCAGATCGAAAATGAGGATGTTCTTCTCGCCGTCGGTCTTCTTGTCCAGA 324256 Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCA 7666 ||||| || || || || || || || || || || ||||| || ||||||||| | | Sbjct 324257 CCGTAGGCAATGGCGGCGGCGGTGGGCTCGTTGATGATACGCAGGACGTTCAGGCCCGAA 324316 Query 7667 ATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTT 7726 || | || || || || || || || ||||| ||||| ||||| || || || || Sbjct 324317 ATCAGACCGGCGTCCTTGGTGGCCTGGCGCTGCGAGTCGTTGAAGTACGCAGGCACAGTG 324376 Query 7727 ACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTA 7786 | ||| |||||| |||| | ||||| | | || ||| | || ||| ||| | Sbjct 324377 ATGACGGCGTCCTTGACCTCGCCTCCGAGGAAGGCCTCGGCGGTCTCGCGCATCTTGATC 324436 Query 7787 AGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACT 7846 || |||||||| || ||||| || | | || || || || || || || || || Sbjct 324437 AGCACCATCGACGAGATCTCCTCCGGAGTGAAGGTCTTGGTCTCGCCCTTGAAGTCGACC 324496 Query 7847 TCAATCATGGGTTTATCCGCAGCACCGGG-GATAACCTTATACGACCAATCTTTCATATC 7905 | || | || || || | | | ||| ||||| ||| ||| | ||||| || Sbjct 324497 TGGATGACAGGCTT----GCTGTCCTTCGAGATGACCTTGAACGGCCAGTGCTTCATGTC 324552 Query 7906 GTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGT 7965 ||||||| | || || | ||||| |||||||| || || || || || Sbjct 324553 CGACTGGACCTCGTTCTCGTCGAAGCGACGGCCGATGAGACGCTTGGCGTCGAAGACGGT 324612 Query 7966 GTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATT 8025 ||| | |||||||||||| |||||||| || ||||| || || || || || | | Sbjct 324613 GTTGTGGGGGTTCATGGCCACCTGGTTCTTGGCGGCGTCGCCAATCAGGCGCTCGGTGT- 324671 Query 8026 TTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085 | || || |||| ||||| ||||| || || || || ||||||||||| || || || Sbjct 324672 --CGGTGAAGCCGACATACGAGGGGGTGGTGCGGTTACCCTGGTCGTTCGCGATGATCTC 324729 Query 8086 TACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 ||||||||||| |||||||| || ||||| || || || ||||| | ||||||||| Sbjct 324730 AACGCGGTCGTTCTGCCAGACACCAACGCAGGAGTAGGTGGTTCCAAGATCAATACC 324786 >seq195 Length=1001952 Score = 233 bits (258), Expect = 2e-56 Identities = 597/898 (66%), Gaps = 22/898 (2%) Strand=Plus/Minus Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318 || ||||| || || | | | | || ||||| ||| | | ||| |||| || ||||| Sbjct 473099 GCGCGGGTGATCGAAGCCTGGTAGTCGACGCCATCGAACAGCGAGTCAACCTCGATGGTG 473040 Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378 || | ||| ||| || | || ||||| |||||||| || || || || | ||| || Sbjct 473039 GTGCGGGCCAGCGACGACAGGGTGCGCTTGGCGCGCTCGCAGGCAGTGCGCAGACGGCGG 472980 Query 7379 AGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAG 7438 |||||||| |||| | || || || ||||| || || || || || || || |||| Sbjct 472979 AGGGCACGGGGGTCGTCCGAGATGTCCTTCTTGTGCTTGCGCTTGAAGTCCTCCTTGAAG 472920 Query 7439 TG-TCGA--AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTC 7495 || |||| ||| || | | || || || |||||||| | ||| || || || ||||| Sbjct 472919 TGCTCGACCAGG-GTGTGG--TCAAAGTCCTCACCACCAAGGTGGGTGTCACCAGCGGTG 472863 Query 7496 GCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCA 7555 || ||||| |||||||| || ||||| | | || ||| ||||| || |||||||| Sbjct 472862 GCCTTGACGGTGAAGATACCGCCGGCAATGGTCAGCAGCGACACATCGAAGGTACCACCT 472803 Query 7556 CCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCG 7615 || || || || ||||| || | || || | | ||| || |||||||| || Sbjct 472802 CCGAGATCGAAGATGAGCACCTGGCGCTCCTCCTTCTGCTTCGAGTCCAGACCGTAGGCA 472743 Query 7616 ATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGC 7674 || || || || || || || || || || || || ||| | || || | ||| | Sbjct 472742 ATGGCAGCGGCGGTGGGCTCGTTGATGATGCGCAGGACA-TCGAGACCCGAAATGACACC 472684 Query 7675 CGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGC 7734 || || || || || | || || | ||||| |||||||| || || || | ||| || Sbjct 472683 GGCGTCCTTGGTGGCGTTACGCTGGGCGTCGTTGAAGTAGGCGGGCACGGTGATGACGGC 472624 Query 7735 GTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794 | | |||| |||| ||||| | | || || || || ||||| ||| | || ||||| Sbjct 472623 CTTCTTGACGGTCTTGCCGAGCTTGGCCTCAGCAATCTCCTTCATCTTGATCAGCACCAT 472564 Query 7795 CGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCAT 7854 ||| || ||||| | | || || || | || || | || | || ||||| Sbjct 472563 CGACGAGATCTCCTGGGGCGAGAAGGTCTTGGCCTCGCCCTGGAACTGGACCTCAATGTA 472504 Query 7855 GGGTTTATCCGCA-GCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTG-- 7911 || | || || || | || ||||| ||| ||| | || | |||| | Sbjct 472503 CGGCTGCTCGTCACGCTC----GACGACCTTGAACGGCCAGT---TCTGAACGTCACGCT 472451 Query 7912 -GACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTT 7970 |||| |||| || | ||||| || ||||| || || || || ||||| Sbjct 472450 TGACCGACGGGTCGTCGAAGCGACGGCCGATGAGGCGCTTAGCGTCGAAGACGGTGTTGC 472391 Query 7971 TGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCG 8030 ||||||||||| | |||||||| || ||||| || | || || || | | | Sbjct 472390 GCGGGTTCATGGCCGACTGGTTCTTGGCAGCGTCACCAACCAGGCGCTCGCTGTCGT--- 472334 Query 8031 TAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGC 8090 | || ||||||||||| ||||| || || || || || ||||| ||||| || || |||| Sbjct 472333 TGAAGGCGACGTACGAGGGGGTGGTACGGTTACCCTGCTCGTTGGCAATGATCTCGACGC 472274 Query 8091 GGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 | ||| | ||||||| | |||||||| || || || || | ||| |||||||| || Sbjct 472273 GCTCGCCCTCCCAGACGGCAACGCACGAGTAGGTGGTACCCAGATCGATACCGATAGC 472216 >seq13 Length=772781 Score = 120 bits (132), Expect = 4e-22 Identities = 246/363 (68%), Gaps = 12/363 (3%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || |||| ||| || || ||||||||||| Sbjct 473331 TCAAAGTCCTCACCACCAAGGTGGGTGTCACCCGAGGTAGCCAGAACCTCAAAGATACCG 473272 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | || ||| |||||||| |||||||| || || || | | || | | Sbjct 473271 TTGTCGATGGCCAGCAGCGAGACATCAAAGGTACCACCTCCGAGATCGTAGACCAGGATG 473212 Query 7577 TTCGTATCGTCG-TCTTTG---TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | | || || ||| ||||| || |||||||| || || || || || || || Sbjct 473211 T-------GGCGCTCCTTGCCCTTCTTGTCCAGACCGTAGGCAATGGCAGCAGCGGTGGG 473159 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || | ||| || || ||| || |||||||| | | ||||| || || || || Sbjct 473158 CTCGTTGACAATGCGCAGGACGTTGAGACCAGCAATGGCGCCGGCATCCTTGGTGGCCTG 473099 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || || | |||||| |||||||| ||||| || ||||| |||| ||||| || | Sbjct 473098 GCGCTGGGCATCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACCTTGGTGTT 473039 Query 7753 GAGATACGATTC-CGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 ||| || | || ||| | || ||||| ||| || ||||| | || | ||| |||| Sbjct 473038 GAGGTAGGCCTCAGGCGGTCTCCTTCATCTTGCCCAGGACCATGGCCGAGACCTCCTCAG 472979 Query 7812 CCG 7814 || Sbjct 472978 GCG 472976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130997810680