Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq162 136 5e-27 seq160 107 2e-18 seq217 87.8 2e-12 >seq162 Length=1352108 Score = 136 bits (150), Expect = 5e-27 Identities = 564/878 (64%), Gaps = 29/878 (3%) Strand=Plus/Plus Query 106445 TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAG-CCGTCTCATCCTTATC 106503 |||||| || || || || || || |||| ||||| |||| || ||| || Sbjct 1303507 TTGACAAACGACGGCAGCGCAATCGACGCCAGGTTGCACACAGGCCACCTCGTCGGGGCT 1303566 Query 106504 TGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 106563 | |||||| | || ||||| |||| ||| || | ||| ||||| || | |||| || Sbjct 1303567 CGAGTACTCGACGATCTCTGTGCACAGGTTCGAGCACTTGATCGTGCCGAGGTTCTGCTG 1303626 Query 106564 GTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 106623 ||| ||| |||||| ||||||||||| |||||| | || |||||||||| |||| Sbjct 1303627 GTTCGACTTGCGGTTGCATGCATCCTTGTACAGCATGAACGGGTTCCCCGTCTCGATCTG 1303686 Query 106624 TGACTTGAGAATTGCCTTCCACA-CATCGGCG----GCTGGTACAATGGCGTTGGCCCGT 106678 | | || || || | ||||| | || | | | |||| | ||| ||| | Sbjct 1303687 CGCGTCCAGGATCGCATACCACAGCTTCTGTGCGTCGATGGTCGA---GCGC--GCCAGG 1303741 Query 106679 CCCTCCGC---CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAG 106735 || || ||||||||| || || ||||| |||||||| || ||| | | || Sbjct 1303742 CCAGGCGTGTTCTCGTACTTGGTATACAGGGCCTCAAACTCATCGCCCCACACCTCCTGC 1303801 Query 106736 AGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTC 106795 | || ||||||| || || ||||| || ||||| | || || | || |||||| Sbjct 1303802 ATGCCGGGTGCCTCGTGCGGGCAGAACAGCGACCACTTGCCGCCGGCAATGACGCGCTTC 1303861 Query 106796 ATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCA 106855 ||||| || || || |||||||| | | || || || | ||| |||| || | Sbjct 1303862 ATGAACAGATCCGGGATCCACAGCGCATAGAACAGGTCGCGGGCCCGCACCTCCTCCTTG 1303921 Query 106856 CCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAG 106915 || ||||| || | || |||||| | | | ||| || ||||| ||||| |||||| Sbjct 1303922 CCGTGGTTCTTGCGCAGATCCAGGAACGCAAACACATCGGCATGCCACGGCTCCAGATAG 1303981 Query 106916 ACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGC 106968 | || | | || ||| | | ||||| || | || || ||||| ||| Sbjct 1303982 ATCGCAAACGCACCTGGCCGCTTGTTGCCGCCC----TGGTCGACGTACCGCGCCGTGTT 1304037 Query 106969 GTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCG-AATAC 107027 ||| || || || ||||| || | || || | || || || || ||| | ||| Sbjct 1304038 GTTGAACACACGCAGCATCGGCACAAGCCCGTTCGACGTGCCGTTGGTGCCCTGCAATGT 1304097 Query 107028 GAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGA 107087 || | || | | | | ||||| |||||| || ||||| ||| || | Sbjct 1304098 ATGAGCCCGTAGCCCGGATGTTGCTCACGTGCAGCCCAATGCCGCCAGCGTTCTTGGAAA 1304157 Query 107088 TTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGA 107147 | ||||| ||| || | || || | ||||| || | ||| ||| ||| |||| | Sbjct 1304158 TCTGCGCGCACACCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCATCCGACATGGCCA 1304217 Query 107148 TAAGGAAGCAACTGGACATCTGC-GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTT 107206 ||||||||| || | |||| || | || || || | ||||| || || || | Sbjct 1304218 CAAGGAAGCACGACGAGAGCTGCGGGACGCGGCGTGCCCGAGTTGAACAGCGTCGGCGAC 1304277 Query 107207 GCGTGAATGAACATACCTTG-GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTC 107265 ||||| |||| | || ||| ||||| || ||| ||||| | | | |||||||| Sbjct 1304278 GCGTGCGTGAAGA-ACTTTGACGACATGAGGTTGTACGTCTCGATCGCCGCGTCAATGTC 1304336 Query 107266 TTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 ||||||||||| | || ||| ||||| | || || Sbjct 1304337 CGAGCCGTGGATGCCCAGGGACACGCGCATCACCAGGT 1304374 >seq160 Length=71855 Score = 107 bits (118), Expect = 2e-18 Identities = 256/382 (67%), Gaps = 14/382 (4%) Strand=Plus/Plus Query 106445 TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCT 106504 |||||| || || || || || || |||| ||||| |||||| ||| || Sbjct 71415 TTGACAAACGACGGCAGCGCAATCGACGCCAGGTTGCACACAGCCACCTCGTCGGGGCTC 71474 Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 | |||||| | || ||||| |||| ||| || | ||| ||||| || | |||| ||| Sbjct 71475 GAGTACTCGACGATCTCTGTGCACAGGTTCGAGCACTTGATCGTGCCGAGGTTCTGCTGG 71534 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 || ||| |||||| ||||||||||| |||||| | || |||||||||| |||| Sbjct 71535 TTCGACTTGCGGTTGCATGCATCCTTGTACAGCATGAACGGGTTCCCCGTCTCGATCTGC 71594 Query 106625 GACTTGAGAATTGCCTTCCACA-CATCGGCG----GCTGGTACAATGGCGTTGGCCCGTC 106679 | | || || || | ||||| | || | | | |||| | ||| ||| | | Sbjct 71595 GCGTCCAGGATCGCATACCACAGCTTCTGTGCGTCGATGGTCGA---GCG--CGCCAGGC 71649 Query 106680 CCTCCG---CCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGA 106736 | || ||||||||| || || ||||| |||||||| || ||| | | || | Sbjct 71650 CAGGCGTGTTCTCGTACTTGGTATACAGGGCCTCAAACTCATCGCCCCACACCTCCTGCA 71709 Query 106737 GACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 106796 || ||||||| || || ||||| || ||| ||| || || | || ||||||| Sbjct 71710 TGCCGGGTGCCTCGTGCGGGCAGAACAGCGACACTTG-CCGCCGGCAATGACGCGCTTCA 71768 Query 106797 TGAAAAGGTCTGGAATCCACAG 106818 |||| || || || |||||||| Sbjct 71769 TGAACAGATCCGGGATCCACAG 71790 >seq217 Length=908848 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| ||| ||| || ||||| || ||| | || || || || |||||| || || Sbjct 400063 GGCAAAGTCCGTGTGCAGGCCCTCGTCGCGGCAGATCAGCTCGTTCGAGAAGGTCAGTCC 400122 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 117391 ||||| || || |||||||| | ||| | || | |||| || || || |||||||||| Sbjct 400123 AGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATCGACGCA-AACGAGCCCGAGAAGAAGA 400181 Query 117392 TACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431 | ||||| || |||||| || | |||||| || |||| Sbjct 400182 TGCCCTCGACCGCCGCAAAGGCCACCAGGCGCACGCCGAA 400221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979125929480