Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq162 259 9e-64 seq217 237 3e-57 seq160 156 8e-33 >seq162 Length=1352108 Score = 259 bits (286), Expect = 9e-64 Identities = 988/1522 (65%), Gaps = 57/1522 (4%) Strand=Plus/Plus Query 221351 TTAGACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAA 221410 || |||| ||| || || | ||||| |||||||| |||| | | ||| | | || Sbjct 1303183 TTCGACATCGGGCTGCCCTGGTACGTCTCGTAGGCGCCGTGGACGGCCGCCAGCTCACAC 1303242 Query 221411 GACTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-G 221468 ||| || || || || || |||||||||||||| ||||| ||| || ||| | | Sbjct 1303243 GAC-GCCTCGAGCGCCGCATGGTAGATGGTCTCGAAGATGGCGCGGTTCAG-CTCGCGTG 1303300 Query 221469 CCTCGGGAGAAGT-GAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACT 221527 |||| || | | ||| ||||| |||| | ||| | || ||||| ||||| ||| Sbjct 1303301 CCTCAGGCCGACTCGAACGGCATGCGCATGGCGAGGAAGGCATCAGCCAGCCCCTGAACT 1303360 Query 221528 CCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCT--GGCACGGGATAAA 221585 || || |||||||| | ||| | | ||||| |||| ||| ||| ||||| || || | Sbjct 1303361 CCAATGCCGATGGGACGGTGGCGCATGTTGCT-GCGGACGCGTCTCGGGCACCGGGTAGA 1303419 Query 221586 AGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCT 221645 |||||| |||||| | ||||| |||||| |||| || || || ||| ||||| Sbjct 1303420 AGTTGATGTCGATGATCTTGTTCAGGTTCTTGGTGACCACCTTGGTGACGTCGTGCAGCT 1303479 Query 221646 TCTGGTGATTGAACACCAACTCG--CCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAG 221703 |||| || | ||||| | |||| | || ||||| | || Sbjct 1303480 GCTGG------AAGTCGTACTCGGTCGGCCGACTTG----------ACAAACGACGGCAG 1303523 Query 221704 GGCAACGCTGGCCAGGTTACACAC-GGCCACCTCGTCCTTGTTGGTATACTGTATGATCT 221762 |||| |||||||| ||||| |||||||||||| | | | |||| | ||||| Sbjct 1303524 CGCAATCGACGCCAGGTTGCACACAGGCCACCTCGTCGGGGCTCGAGTACTCGACGATCT 1303583 Query 221763 CTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGG 221822 |||| || ||||| ||||||||| || || |||| | || || |||||||| ||| Sbjct 1303584 CTGTGCACAGGTTCGAGCACTTGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGC 1303643 Query 221823 CAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGT 221882 || |||||||| ||||| || || || ||||| | ||| || |||| ||| | Sbjct 1303644 ATGCATCCTTGTACAGCATGAACGGGTTCCCCGTCTCGATCTGCGCGTCCAGGATCGCAT 1303703 Query 221883 CCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACC----CTCG-GTCTTTTCAT 221936 ||| || | |||| ||| | ||| || || || | | || || || | Sbjct 1303704 ACCACAGCT-TCTGTGCGTCGATGGTC-----GAGCGCGCCAGGCCAGGCGTGTTCTCGT 1303757 Query 221937 ACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTG- 221995 || |||||| || ||||||| || || || |||| | || ||| || | | Sbjct 1303758 ACTTGGTATACAGGGCCTCAAACTCATCGCCCCACACCTCCTGCATGCCGGGTGCCTCGT 1303817 Query 221996 GCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGG 222055 ||||| || | ||| ||| | | | | |||| | || |||||| || |||||| Sbjct 1303818 GCGGG-CAGAACAGCGACCACTTGCCGCCGGCAATGACGCGCTTCATGAACAGATCCGGG 1303876 Query 222056 ATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTC 222115 ||||||||||| | || || || | || |||| ||||||| ||||| ||| || | | Sbjct 1303877 ATCCACAGCGCATAGAACAGGTCGCGGGCCCGCACCTCCTCCTTGCCGTGGTTCTTGCGC 1303936 Query 222116 AGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCG 222175 ||||||| ||| |||| | || || ||||||||||||||||||| || | || || Sbjct 1303937 AGATCCAGGAACGCAAACACATCGGCATGCCACGGCTCCAGATAGATCGCAAACGCACCT 1303996 Query 222176 GGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTC 222235 || ||||||||||| ||||| || || || | || |||||| | || || || Sbjct 1303997 GGCCGCTTGTTGCCGCCCTGGTCGACGTACCGCGCCGTGTTGTTGAACACACGCAGCATC 1304056 Query 222236 GGTACCAGTCCGTTGGATCGACCGTTGGTGCCCT-TAATGTACGCACCGCCGGCCCTCAG 222294 || || || ||||| || ||||||||||||| |||||| | || |||| | Sbjct 1304057 GGCACAAGCCCGTTCGACGTGCCGTTGGTGCCCTGCAATGTATGAGCCCGTAGCCCGGAT 1304116 Query 222295 GTTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAG 222354 ||| || | || || || || || |||| || || ||| ||||| ||| || Sbjct 1304117 GTTGCTCACGTGCAGCCCAATGCCGCCAGCGTTCTTGGAAATCTGCGCGCACACCTTCAG 1304176 Query 222355 AGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACAT 222414 ||||| ||||||||| || ||| ||| | | || || || || ||||| | Sbjct 1304177 CGTGTCGTAGATGCCCTCGATGCTGTCATCCGACATGGCCACAAGGAAGCACGACGAGAG 1304236 Query 222415 CTGAGATTTG-GTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCC 222473 ||| | | | | | | ||| |||||||| || ||||| || ||| | Sbjct 1304237 CTGCGGGACGCGGCGTGCCCGAGTTGAACAGCGTCGGCGACGCGTGCGTGAAGAACTTTG 1304296 Query 222474 TAGACATCAGATCGTACGTCTCTA-CGACTCTGGCGATGTTGTCCCCGTGAATCTGCATG 222532 ||||| || | ||||||||| | || | | | | |||| ||||| || || | Sbjct 1304297 ACGACATGAGGTTGTACGTCTCGATCGCCGC-GTCAATGTCCGAGCCGTGGATGCCCAGG 1304355 Query 222533 GCGCATCTCATGTACATGTACTGGGGCCTCTCCA-CAGGA--CCCTTGGAGCTGGAGAGC 222589 | | ||| || || ||| || | ||| | || | ||| | || || ||| Sbjct 1304356 GACACGCGCATCACCAGGTGCTGCGGGCGCTCGACCAACACGCCCATTGA--TGCGCAGC 1304413 Query 222590 AGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGA 222649 || ||||| || || ||||||||||||||| ||||| || ||||| | || Sbjct 1304414 AGATACGAGCGCTCGAGCGTCTTGAACCCAAAGAAGTTGTAGTTGAAGTCGCGCGAGTAG 1304473 Query 222650 ACCACGGCGGCGTCCAGCTCCGACTTGTGCT-TTACGCTCAACTCGAAAAAGCGCTCAGA 222708 | || || |||| | || ||||| || | | | || ||| | || | ||||| Sbjct 1304474 TCAACCGCCGCGTTGATCTTGTCCTTGTTCTGCTGCAC-CAGCTCCAGAAGCTGGTCAGA 1304532 Query 222709 CACGAGGGGAGCGTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAG---CTGCCACAT 222765 ||| | || | || || |||||| | ||||| | | || ||| |||| || Sbjct 1304533 CACCATCGGCGAGTGCTTTTTGGTCTTTGGGTTGATGAACGCGTGCAGGTCCTGCGAC-- 1304590 Query 222766 GGCATCAGAGAACGTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGC 222825 |||| ||||| | ||| | |||| ||| ||||| ||||| | ||||| || | ||| Sbjct 1304591 CACATCCGAGAAGTTATCGTGCGTCTCCTTCTGCAGGTTCGAGATCGCGATACGCGCCGC 1304650 Query 222826 CAAGATACCATAGTCAGGGTGC 222847 || | | ||||| |||||| Sbjct 1304651 CAGAACCGCGTAGTCGGGGTGC 1304672 >seq217 Length=908848 Score = 237 bits (262), Expect = 3e-57 Identities = 568/848 (67%), Gaps = 34/848 (4%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAAC-TCAAACTGGACCGCCGAAGAGATTGA 25532 || || |||||||||||||||||| | | | | || |||||| ||||| || || || Sbjct 400620 GAGATCTGGGAGATGTACAAGAAG-CACGAGGCGTCGTTCTGGACGGCCGAGGAAATCGA 400562 Query 25533 TCTGGCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTC 25588 ||| | ||||||||| | |||| || || | | | | |||||| || ||| Sbjct 400561 CCTGTCGCAGGACATGGGCCACTGGGACAACCGCCTGAACGACA-ACGAGCGTCACTTTA 400503 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTG-TGC 25647 ||||||||||| | || |||||||| ||||| || || || || |||||||| ||| ||| Sbjct 400502 TCAAGTACGTGCTCGCGTTCTTTGCTGCCTCGGACGGCATCGTCAACGAGAACCTGGTGC 400443 Query 25648 GAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATG 25707 ||| || | || || || ||| | ||||| || |||||||| ||||||||| Sbjct 400442 -AGAACTTTAGCACCGAGGTTCAGATCCCCGAGGCGCGGTCGTTCTACGGCTTCCAGATG 400384 Query 25708 GCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACA 25764 || || || | ||||| ||| ||| | ||| || || |||||||| | Sbjct 400383 ATGATTGAGAACATCCACTCGGAGACGTACTC---GCTGCTCATTGACACGTACAT--CC 400329 Query 25765 GACGTCGCCGAGAGAGATCGGCTGTTTGGT----GCCATCGAGCACATACCCAGCATCAA 25820 | || | || || ||| || || |||| | || ||||| |||| || ||||| Sbjct 400328 G-CGACCCCAAG-GAGCGCGACTTTTTGTTCCACGCTATCGACAACATCCCGTGCATCCG 400271 Query 25821 GAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTTGGCGAGC 25879 | |||||| ||||| | |||||| | | || ||| || | ||| |||| || Sbjct 400270 CAAGAAGGCCGACTGGGCGCTTCGCTGGATCGATAACCGCGAG-GCCAAGTTCGGCGTGC 400212 Query 25880 GGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCT 25939 | ||||| |||||||| || || ||||||||||| ||| || ||||||||| | |||| Sbjct 400211 GCCTGGTGGCCTTTGCGGCGGTCGAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCGATCT 400152 Query 25940 TCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCA 25999 ||||||||||| || || ||||| || ||| ||| || |||||||| ||| || Sbjct 400151 TCTGGCTCAAGAAGCGCGGCCTGATGCCTGGACTGACCTTCTCGAACGAGCTGATCTGCC 400092 Query 26000 GGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGC--TCCA 26057 | |||||||| || |||| || ||||||||| |||| | | |||| ||| ||| Sbjct 400091 GCGACGAGGGCCTGCACACGGACTTTGCCTGCGTGCTGTTC---CACCACCTGCAGTCCC 400035 Query 26058 CAAACCTTCTCAAGAGACCGT-CTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGG 26116 | || | ||| | | || ||| ||||||| |||||||| |||||| ||| Sbjct 400034 C--GCCGGCCGCCGAGGTCATCCTCCAG-ATCATCACCGAGGCTGTCACCATCGAGCAGG 399978 Query 26117 AGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCC 26176 |||| | | ||||||||| || |||||| ||| Sbjct 399977 AGTTCCTGTCCGAGGCGCTGCCCGTGTCACTGATCGGCATGAACGCCAAGCTCATGTGCC 399918 Query 26177 AATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACA 26236 | || || |||| ||| || |||| |||||| | ||||| | ||| | |||| Sbjct 399917 AGTATATCGAGTTTGTTGCTGACCGCCTGCTGGTCGCTCTGGGCCAGCCCAAGCACTACC 399858 Query 26237 GTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCT 26296 | | ||||| |||||||| ||||| | || ||| || | || ||||||||||||| Sbjct 399857 TGGCCACCAACCCCTTCGACTTCATGGACATGATCTCGATGCAGGGCAAGACCAACTTCT 399798 Query 26297 TTGAAAAG 26304 | || ||| Sbjct 399797 TCGAGAAG 399790 >seq160 Length=71855 Score = 156 bits (172), Expect = 8e-33 Identities = 513/782 (66%), Gaps = 38/782 (5%) Strand=Plus/Plus Query 221351 TTAGACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAA 221410 || |||| ||| || || | ||||| |||||||| |||| | | ||| | | || Sbjct 71096 TTCGACATCGGGCTGCCCTGGTACGTCTCGTAGGCGCCGTGGACGGCCGCCAGCTCACAC 71155 Query 221411 GACTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-G 221468 ||| || || || || || |||||||||||||| ||||| ||| || ||| | | Sbjct 71156 GAC-GCCTCGAGCGCCGCATGGTAGATGGTCTCGAAGATGGCGCGGTTCAG-CTCGCGTG 71213 Query 221469 CCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTC 221528 |||| | || ||| ||||| |||| | ||| | || ||||| ||||| |||| Sbjct 71214 CCTCAGCCGACTCGAACGGCATGCGCATGGCGAGGAAGGCATCAGCCAGCCCCTGAACTC 71273 Query 221529 CGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCTTCTGGCACGGGATAAAAG 221587 | || |||||||| | ||| | | ||||| ||| | || || ||||| || || ||| Sbjct 71274 CAATGCCGATGGGACGGTG-CGCATGTTGCT-GCGACGCGTCTCGGGCACCGGGTAGAAG 71331 Query 221588 TTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTC 221647 |||| |||||| | ||||| |||||| |||| || || || ||| ||||| | Sbjct 71332 TTGATGTCGATGATCTTGTTCAGGTTCTTGGTGACCACCTTGGTGACGTCGTGCAGCTGC 71391 Query 221648 TGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCA 221707 ||| || | ||||| || | || ||||| | || ||| Sbjct 71392 TGG------AAGTCGTACTCGGTCGCGACTTG----------ACAAACGACGGCAGCGCA 71435 Query 221708 ACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTA 221767 | |||||||| ||||| ||||||||||| | | | |||| | ||||||||| Sbjct 71436 ATCGACGCCAGGTTGCACACAGCCACCTCGTCGGGGCTCGAGTACTCGACGATCTCTGTG 71495 Query 221768 CAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG 221827 || ||||| ||||||||| || || |||| | || || |||||||| ||| || Sbjct 71496 CACAGGTTCGAGCACTTGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCATGCA 71555 Query 221828 TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAG 221887 |||||||| ||||| || || || ||||| | ||| || |||| ||| | ||| Sbjct 71556 TCCTTGTACAGCATGAACGGGTTCCCCGTCTCGATCTGCGCGTCCAGGATCGCATACCAC 71615 Query 221888 AG-TTCTCTGGCGCTCACCGTCCTCTTGACTGCACC---CTCG--GTCTTTTCATACCCG 221941 || |||| | ||| | ||| || || || | | || || || ||| | Sbjct 71616 AGCTTCTGT-GCGTCGATGGTC-----GAGCGCGCCAGGCCAGGCGTGTTCTCGTACTTG 71669 Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCG-GG 222000 ||||| || ||||||| || || || |||| | || ||| || ||| | | || Sbjct 71670 GTATACAGGGCCTCAAACTCATCGCCCCACACCTCCTGCATGCC-GGGTGCCTCGTGCGG 71728 Query 222001 ACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCA 222060 || | ||| | || | | | | |||| | || |||||| || ||||||||||| Sbjct 71729 GCAGAACAG-CGACACTTGCCGCCGGCAATGACGCGCTTCATGAACAGATCCGGGATCCA 71787 Query 222061 CAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATC 222120 |||||| | || || || | || |||| ||||||| ||||| ||| || | |||||| Sbjct 71788 CAGCGCATAGAACAGGTCGCGGGCCCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGATC 71847 Query 222121 CA 222122 || Sbjct 71848 CA 71849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842164402880