Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 143 2e-29 >seq1 Length=3302357 Score = 143 bits (158), Expect = 2e-29 Identities = 217/304 (71%), Gaps = 6/304 (2%) Strand=Plus/Minus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACA-TTCCGGACACAACACAAACTTGCGGATGAAAC 34369 ||| || |||||||||||||| | || || | | |||| ||| ||| ||||| | Sbjct 1785482 GATCAGGTCAGTCTCCGGGTTCTTGCAGTTGCCG-CACAGCACGAACCGCTCAATGAACC 1785424 Query 34370 CATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGT 34429 | || ||||||||||| | ||| | |||||| | |||||||| ||| | || |||| Sbjct 1785423 CGTCGAGCAGGTCCTGCAGCTTGTTGACGTCGTGCGCACCGTTGACAATGTACCGGTCGT 1785364 Query 34430 TTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAA 34489 | || | |||| || |||||||||||||||| || |||||||| |||||||| Sbjct 1785363 TCTTCTCCTCGATCTTGACCTGCGCGCCCAGCTCGCCGCCAAAGTACTTGGTCGGGTATG 1785304 Query 34490 TGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGC 34549 | ||| || || || ||| | |||| |||||| | || |||||||||| Sbjct 1785303 CCGGCGGGCGCGAGAGAGCACGGGCCACCTCGGCAATGTTGGGCAGCACTGTCTTGATGC 1785244 Query 34550 CGTTGCCCTTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGC 34607 |||||||||| || || | |||| | |||| | ||||| |||||||||||||||| Sbjct 1785243 CGTTGCCCTTGCCCTCAATCTTGCCCTGCAGCT--TGGGCATCTTGTAGCGGTAGAACGA 1785186 Query 34608 GTCC 34611 |||| Sbjct 1785185 GTCC 1785182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840457847911