Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq153 91.5 1e-13 seq2 86.0 5e-12 seq155 82.4 6e-11 seq151 82.4 6e-11 seq79 82.4 6e-11 seq1 82.4 6e-11 >seq153 Length=77323 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| || || || | || ||||| || || ||| |||| |||| | Sbjct 48280 ATGCAGATTTTCGTGAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 48339 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || || || |||||| || || |||||| | || || ||| Sbjct 48340 GATACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 48399 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||| ||||||| | || | ||||||||||| Sbjct 48400 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 48459 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || ||||| ||||| Sbjct 48460 ATCCAGAAGGAGTCGACTCTGCACCTGGTG 48489 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||| || || | || ||||| || || ||| | || |||| | Sbjct 48052 ATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCGTCG 48111 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || || |||||| || || |||||| | || || ||| Sbjct 48112 GACACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 48171 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||| ||||| | | || | ||||||||||| Sbjct 48172 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAAC 48231 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || ||||| ||||| Sbjct 48232 ATCCAGAAGGAGTCGACTCTGCACCTGGTG 48261 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| || || || | || ||||| || || ||| |||| |||| | Sbjct 48508 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 48567 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || || || |||||| || || |||||| | || || ||| Sbjct 48568 GACACCATTGACAACGTCAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 48627 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||| ||||||| | || | ||||||||||| Sbjct 48628 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCGGACTACAAC 48687 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || ||||| ||||| Sbjct 48688 ATCCAGAAGGAGTCGACTCTGCACCTGGTG 48717 >seq2 Length=801100 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||| || || | || ||||| || || ||| |||| |||| | Sbjct 378045 ATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 378104 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || || |||||| || || || ||| | || || ||| Sbjct 378105 GACACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 378164 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||| ||||||| | || | ||||||||||| Sbjct 378165 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 378224 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || ||||| ||||| Sbjct 378225 ATCCAGAAGGAGTCGACTCTGCACTTGGTG 378254 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| || || || | || ||||| ||||| ||| |||| |||| | Sbjct 378273 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCG 378332 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || || |||||| || || || ||| | || || ||| Sbjct 378333 GACACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 378392 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||| ||||||| | || | ||||||||||| Sbjct 378393 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 378452 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || ||||| ||||| Sbjct 378453 ATCCAGAAGGAGTCGACTCTGCACTTGGTG 378482 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| || || || | || ||||| || || ||| |||| |||| | Sbjct 378501 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 378560 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || || |||||| || || || ||| | || || ||| Sbjct 378561 GACACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 378620 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||| ||||||| | || | ||||||||||| Sbjct 378621 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 378680 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || ||||| ||||| Sbjct 378681 ATCCAGAAGGAGTCGACTCTGCACCTGGTG 378710 >seq155 Length=76293 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| || || || | || ||||| ||||| ||| |||| |||| || | Sbjct 26706 ATGCAGATTTTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 26765 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || || ||||| || || || || | ||| || ||| Sbjct 26766 GACACCATCGATAACGTTAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAG 26825 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||| ||||||| | || | ||||||||||| Sbjct 26826 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 26885 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || | ||| ||||| Sbjct 26886 ATCCAGAAGGAGTCGACCCTTCACCTGGTG 26915 >seq151 Length=1709611 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| ||||| || | || ||||| ||||| ||| | || |||| | Sbjct 449558 ATGCAGATTTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCG 449617 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || || ||||| || || || ||| | ||| || ||| Sbjct 449618 GACACCATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAG 449677 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||| ||||||| | || | ||||||||||| Sbjct 449678 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 449737 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || ||||| | ||| Sbjct 449738 ATCCAGAAGGAGTCGACCCTGCACCTCGTG 449767 >seq79 Length=276002 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/138 (75%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 105086 GCACGGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTGCACGTCCGCCGGCGA 105145 |||||| || ||||| |||||||| ||||| | | |||||||||||||| || ||| Sbjct 192971 GCACGGATTCCACGTGCACGAGTTTGGCGACAACTCGAACGGCTGCACGTCGGCGGGCCC 193030 Query 105146 GCACTTCAACCC-TACGCGCCAAAATCACGGCGCTCCAGAC-GCCGCAGAAAGGCACGTC 105203 |||||||||||| | | | | | |||||||| || ||| || | || | || || Sbjct 193031 GCACTTCAACCCGTTCAAG-AAGACGCACGGCGCGCC-GACGGCTGAGGAGCGCCATGTG 193088 Query 105204 GGCGACCTGGGCAATGTC 105221 |||||||||||||| ||| Sbjct 193089 GGCGACCTGGGCAACGTC 193106 >seq1 Length=3302357 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| || || || | || ||||| ||||| ||| |||| |||| || | Sbjct 871860 ATGCAGATTTTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 871919 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || || ||||| || || || || | ||| || ||| Sbjct 871920 GACACCATCGATAACGTTAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAG 871979 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||| ||||||| | || | ||||||||||| Sbjct 871980 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 872039 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || | ||| ||||| Sbjct 872040 ATCCAGAAGGAGTCGACCCTTCACCTGGTG 872069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875696482403