Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq162 156 4e-33 seq217 143 3e-29 seq79 118 1e-21 seq153 89.7 5e-13 >seq162 Length=1352108 Score = 156 bits (172), Expect = 4e-33 Identities = 939/1464 (64%), Gaps = 65/1464 (4%) Strand=Plus/Plus Query 146888 ACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGA 146947 |||| |||||||| || |||||||| ||||| || || | || | ||| ||| Sbjct 1302953 ACTGGTTGACCACCTGGAACTCGCCGGCCAGGACGCGGCGCGTGTAGATGTTGGACGTGT 1303012 Query 146948 AAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACG 147007 | |||||||| |||| || ||| | || || | || | || || |||||| | Sbjct 1303013 ACGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGCGATGTCGACGCTGTGGGCATGGGGG 1303072 Query 147008 CCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGT 147067 |||| | || || || |||| |||| | | || | ||| || | | | ||||| Sbjct 1303073 CCACAAGCAGCGAGTTGCGCACGCCGTGCTCCCGCACCTTGGCCCGGAGCGCGTCCCAGT 1303132 Query 147068 CCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCC--TCGACTGGC 147125 |||| ||| |||| |||| ||||| || ||| ||| || ||||| | Sbjct 1303133 CCCAGCGGTCCGACGGCGCCACGCCCCACAGATCCGGCTGCAGCTTGCCCTTCGACAT-C 1303191 Query 147126 GGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTC 147185 ||| ||||| | |||| |||| |||| | ||||| ||||| ||||| Sbjct 1303192 GGG-CTGCCCTGGTACGTCTCGTAGGCGCCGTGGACGGCCGCCAGCTCACACGACGCCTC 1303250 Query 147186 GAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCT 147245 |||||| ||| ||| ||||| ||| ||| ||| || || || || | Sbjct 1303251 GAGCGCCGCATGGTAGATGGTCTCGAAGATGGCGCGGTTCAGCTCGCGTGCCTCAGGCCG 1303310 Query 147246 -CTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGA 147304 |||| | ||||| |||| | |||||||| |||| ||||| | || | ||||| Sbjct 1303311 ACTCGAACGGCATGCGCATGGCGAGGAAGGCATCAGCCAGCCCCTGAACTCCAATGCCGA 1303370 Query 147305 TAGGTCGATGCTTTTCGTTGCTGCGCTTCGCG-CTCGCT-ATGGGATAGTGGTTGCGATC 147362 | || || || ||||||||| |||| |||| | || ||| |||| || Sbjct 1303371 TGGGACGGTGGCGCATGTTGCTGCGGA-CGCGTCTCGGGCACCGGGTAGAAGTTGATGTC 1303429 Query 147363 AATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTG-AGTTTCTCGAAAT 147421 || |||||||| ||||| || || || || | || || || | || ||| | Sbjct 1303430 GATGATCTTGTTCAGGTTCTTGGTGACCACCTTGGTGAC-GTCGTGCAGCTGCTGGAAGT 1303488 Query 147422 CATAA---GTC--CCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATT 147476 | || ||| ||| ||| |||| ||| || || || || |||||||| || Sbjct 1303489 CGTACTCGGTCGGCCGACTT-GACAA--ACGAC--GG--CAGCGCAATCGACGCCAGGTT 1303541 Query 147477 GCAGAC-GGCCGTCTCTTCGGCG-TCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTG 147534 ||| || |||| ||| |||| | ||| ||||| ||||| || | ||||||||| | Sbjct 1303542 GCACACAGGCCACCTCGTCGGGGCTCGA-GTACTCGACGATCTCTGTGCACAGGTTCGAG 1303600 Query 147535 CATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGC 147594 || || || || | || ||||| || || || ||||| || || ||| | ||| Sbjct 1303601 CACTTGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCATGCATCCTTGTACAGC 1303660 Query 147595 ATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGC 147651 ||| |||| || ||||||| |||| || | ||| | ||| ||| | ||| Sbjct 1303661 ATGAACGGGTTCCCCGTCTCGATCTGCGCGTCCAGGATCGCATACCA---CAGCTTCTGT 1303717 Query 147652 GC-TCG-----CACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGC 147705 || ||| | ||| ||| | | | | | ||| |||||| |||| | Sbjct 1303718 GCGTCGATGGTCGAGCGC-GCC-AGGCCAGGCGT-GTTCTCGTACTTGGTATACAGGGCC 1303774 Query 147706 TCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGAC 147765 |||||||| ||||| | || | |||||| || ||||| || | ||||||| Sbjct 1303775 TCAAACTCATCGCCCCACACCTCCTGCATGCCGGGTGCCTCGTGCGGGCAGAACAGCGAC 1303834 Query 147766 CACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATA 147825 ||| || || | || | ||||| ||| ||||||||||| | ||||||||| || | Sbjct 1303835 CACTTGCCGCCGGCAATGACGCGCTTCATGAACAGATCCGGGATCCACAGCGCATAGAAC 1303894 Query 147826 AGATCGCGCGCTTTGCAA----TCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCA-CGC 147880 || ||||| || ||| |||| | || | ||||| || || || | ||| Sbjct 1303895 AGGTCGCGGGCCC-GCACCTCCTCCTTGCCGTGGTTCTTGCG---CAGATCCAGGAACGC 1303950 Query 147881 TATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---C 147937 | | | ||||| ||||| || || | |||| || | ||||||| ||||| | Sbjct 1303951 AA-ACACATCGGCATGCCACGGCTCCAGATAGATCGCAAACGCACCTGGCCGCTTGTTGC 1304009 Query 147938 CGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGC 147997 ||||||||||||| | ||| || ||||||| ||||| |||| ||| || | || ||| Sbjct 1304010 CGCCCTGGTCGACGTACCGCGCCGTGTTGTTGAACACACGCAGCATCGGCACAAGCCCGT 1304069 Query 147998 TCGCAGTGCCGTTGGTGGAAT-TGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTA 148056 ||| |||||||||||| | || | ||| || || | | | ||||| Sbjct 1304070 TCGACGTGCCGTTGGTGCCCTGCAATGTATGAGCCCGTAGCCCGGATGTTGCTCACGTGC 1304129 Query 148057 ACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATG 148116 | ||||||||||| ||| ||| || || ||||| | || || ||||||| Sbjct 1304130 AGCCCAATGCCGCCAGCGTTCTTGGAAATCTGCGCGCACACCTTCAGCGTGTCGTAGATG 1304189 Query 148117 CCGTCGATGCTGTCGTTTTTGAC---GCCAAGCAA-AAAACACGAACACATTTGC-GGAA 148171 || ||||||||||| | ||| |||| ||| || ||||| | | ||| ||| Sbjct 1304190 CCCTCGATGCTGTC--ATCCGACATGGCCA--CAAGGAAGCACGACGAGAGCTGCGGGAC 1304245 Query 148172 TCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGAC-TCATC 148230 | |||| |||| ||| || || || ||||||||| || || |||||| ||| Sbjct 1304246 GCGGCGTGCCCGAGTTGAACAGCGTCGGCGACGCGTGCGTGAAGAA-CTTTGACGACATG 1304304 Query 148231 ATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGC 148290 | | |||||||| || || | || ||||| |||||| |||||||| | |||||| Sbjct 1304305 AGGTTGTACGTCTCGATCGCCGCGTCAATGTCCGAGCCGTGGATGCCCAGGGACACGCGC 1304364 Query 148291 ATGAGCATGTGCTGTGGTCGTTCG 148314 || | || |||||| || || ||| Sbjct 1304365 ATCACCAGGTGCTGCGGGCGCTCG 1304388 >seq217 Length=908848 Score = 143 bits (158), Expect = 3e-29 Identities = 485/748 (65%), Gaps = 13/748 (2%) Strand=Plus/Minus Query 46518 AACGATGACGAACGTTACTTTATCAAGCACGTGTTGGCGTTCTTTGCCGCCGCCGATAGC 46577 ||||| |||| ||| ||||||||||| ||||| | ||||||||||| ||| | || || Sbjct 400524 AACGACAACGAGCGTCACTTTATCAAGTACGTGCTCGCGTTCTTTGCTGCCTCGGACGGC 400465 Query 46578 ATCGTGAATATTAACCTCATCGATTACATGCAGCAAAAAGTTCCGGAATTG-GAAGCGCA 46636 ||||| || ||||| | | || | |||| || | | || || |||| Sbjct 400464 ATCGTCAACGAGAACCTGGTGCAGAACTTT-AGCACCGAGGTTCAGATCCCCGAGGCGCG 400406 Query 46637 GTATTTTTACAACCTTCAAGTGCTCATCGAGTGCGTACACACTGAGATGTATAGTCTGCT 46696 || || ||| | | || || | || ||| | | ||| | |||| ||| ||||| Sbjct 400405 GTCGTTCTACGGCTTCCAGATGATGATTGAGAACATCCACTCGGAGACGTACTCGCTGCT 400346 Query 46697 CATAGAACAATTGATTAGAGACGAGCACGAGCGCGACACGTTGCTGAATGCGTTCGAGCA 46756 ||| || | || | ||| | ||||||||| ||| | | || |||| | Sbjct 400345 CATTGACACGTACATCCGCGACCCCAAGGAGCGCGACTTTTTGTTCCACGCTATCGACAA 400286 Query 46757 CGTGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGA---GCGAGAC 46813 | | || ||| | ||||| |||||| | ||||| | |||||||| | ||||| Sbjct 400285 CATCCCGTGCATCCGCAAGAAGGCCGACTGGGCGCTTCGCTGGATCGATAACCGCGAG-- 400228 Query 46814 CGCCACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGG 46873 |||| | | | || |||| ||||||| || ||| ||||| ||| | || || ||||| Sbjct 400227 -GCCAAGTTCGGCGTGCGCCTGGTGGCCTTTGCGGCGGTCGAGGGCATCTTCTTCTCGGG 400169 Query 46874 CAGTTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAG 46933 | ||||| | || || | | || | ||| | ||||| || ||||| ||| Sbjct 400168 CTCGTTTGCGTCGATCTTCTGGCTCAAGAAGCGCGGCCTGATGCCTGGACTGACCTTCTC 400109 Query 46934 TAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCT-CTATTACA 46992 |||||| |||||| |||||||| || || |||||||||||||| || | || || || Sbjct 400108 GAACGAGCTGATCTGCCGCGACGAGGGCCTGCACACGGACTTTGCCTGCGTGCTGTTCCA 400049 Query 46993 AGACGCGCGTGAATGAGAAATTAAACTCGGACACGATCCTGAGCATGTTTAGGGAGGCGG 47052 || || | | | || || ||| || || | | ||||| | Sbjct 400048 CCACCTGC-AGTCCCCGCCGGCCGCCGAGGTCATCCTCCAGATCA---TCACCGAGGCTG 399993 Query 47053 TGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACG 47112 | | |||||| ||||||| | | | |||||||||||| | || | |||||||||| Sbjct 399992 TCACCATCGAGCAGGAGTTCCTGTCCGAGGCGCTGCCCGTGTCACTGATCGGCATGAACG 399933 Query 47113 CACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGAC 47172 | || |||||| | ||||| |||||||| || || || ||| |||| || || | Sbjct 399932 CCAAGCTCATGTGCCAGTATATCGAGTTTGTTGCTGACCGCCTGCTGGTCGCTCTGGGCC 399873 Query 47173 AACCGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGG 47232 | || || | | || || || || || || ||| ||| || ||| | ||| Sbjct 399872 AGCCCAAGCACTACCTGGCCACCAACCCCTTCGACTTCATGGACATGATCTCGATGCAGG 399813 Query 47233 GCAAAACCAATTTTTTCGAGAAACGAGT 47260 |||| ||||| || |||||||| || || Sbjct 399812 GCAAGACCAACTTCTTCGAGAAGCGCGT 399785 >seq79 Length=276002 Score = 118 bits (130), Expect = 1e-21 Identities = 228/333 (68%), Gaps = 5/333 (2%) Strand=Plus/Minus Query 51541 CAATACCGATGATGCCGCAGCCGAGACGTCCGCCCGAGTTGCCCGTGGTCTTGCTCAGCG 51600 |||| || |||| ||||||| | | || ||||| | ||| || || || || |||| Sbjct 193299 CAATGCCAATGACGCCGCAGGCCTGGCGACCGCCGGCGTTACCGGTAGTGATGGACAGCT 193240 Query 51601 GATGGTCGGTGAGGCCGAGATCGTCGCGCTTTGCGTGAACCACCAGACTGCGGCCAACGA 51660 |||| || ||| |||||||| | || || || || | ||||||| | | Sbjct 193239 CATGGCCGCCCTTGCCCAGATCGTCCTCGTCGGCATGCACAACAATGGTGCGGCCGATAA 193180 Query 51661 CGCTATTTTCGCCGAAAAGCGTCATCACGTTGTCGATCTTGTCCACTTCGGTGAGGGCGT 51720 |||| | ||||| || ||||||| | |||| | || || | || | | || Sbjct 193179 CGCTGTGCTCGCCAAACAGCGTCACCTGCGAGTCGGAGATCTCGACCTTGGCCACGCCG- 193121 Query 51721 TGGACACTTTAGCCTCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAG 51780 ||| | || ||| ||||||| |||||| || |||||| | | || |||| | Sbjct 193120 --GACTCGGACGCGATGACGTTGCCCAGGTCGCCCACATGGCGCTCCTCAGCCGTCGGCG 193063 Query 51781 CGCCGTG-GTCGCTGCCGGTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTG 51839 ||||||| ||| | | ||||||||||| ||||||||||||||||||||| | Sbjct 193062 CGCCGTGCGTCT-TCTTGAACGGGTTGAAGTGCGGGCCCGCCGACGTGCAGCCGTTCGAG 193004 Query 51840 GTGTCGCCGAATTCGTGCACGTGGAATCCGTGC 51872 ||||||| || ||||||||||||||||||||| Sbjct 193003 TTGTCGCCAAACTCGTGCACGTGGAATCCGTGC 192971 >seq153 Length=77323 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||||||||| | ||| || || |||||||| || |||| Sbjct 48473 GACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCG 48414 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| || || || || |||||||| || || ||| || || || | Sbjct 48413 AAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTGACG 48354 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | || |||||| |||| || | || || ||||| || || || Sbjct 48353 TTGTCGATGGTATCCGACGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTC 48294 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 48293 ACGAAAATCTGCAT 48280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609847615720