Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq151 111 1e-19 seq79 111 1e-19 seq155 107 2e-18 seq2 107 2e-18 seq1 107 2e-18 seq153 98.7 9e-16 >seq151 Length=1709611 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || |||| || |||||||| || || || Sbjct 449749 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 449690 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||||| | || Sbjct 449689 GATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGA-CGT 449631 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| ||| |||||||| | ||||| || || ||||| | || || | Sbjct 449630 TGTCGATGGTGTCCGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGA 449571 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 449570 CGAAAATCTGCAT 449558 >seq79 Length=276002 Score = 111 bits (122), Expect = 1e-19 Identities = 217/323 (67%), Gaps = 27/323 (8%) Strand=Plus/Minus Query 42533 CCAATGATCCCGCAAGCCAGTCTACCGCCCGAGTTGCCGGT------------CTCGTCG 42580 ||||||| ||||| ||| | | |||||| | ||| ||||| ||| | | Sbjct 193294 CCAATGACGCCGCAGGCCTGGCGACCGCCGGCGTTACCGGTAGTGATGGACAGCTCATGG 193235 Query 42581 CCGCTCAAGCCCAGATCGTCTTCCATGGTGTGCACGACTATGCTTCGACCCAGAATGCTG 42640 |||| | |||||||||||| || || ||||| || ||| | || || | || |||| Sbjct 193234 CCGCCCTTGCCCAGATCGTCCTCGTCGGCATGCACAACAATGGTGCGGCCGATAACGCTG 193175 Query 42641 TGTTCGCCGTACAGCGACA---GCATGTGGTCGATCTT----TT--------CGAACGTG 42685 || ||||| |||||| || || || | ||||| || || || | Sbjct 193174 TGCTCGCCAAACAGCGTCACCTGCGAGTCGGAGATCTCGACCTTGGCCACGCCGGACTCG 193115 Query 42686 GACGCGCACACGTTGCCCAAGTCGCCGAGATGGCGTTGCGCGCTAAACTGACCGCCGTGC 42745 |||||| |||||||||| |||||| | |||||| | | | | | |||||||| Sbjct 193114 GACGCGATGACGTTGCCCAGGTCGCCCACATGGCGCTCCTCAGCCGTCGGCGCGCCGTGC 193055 Query 42746 GGTTGATGGTGCGGGTTCAAGTGCTCGCCGGCCGACGTGCAACCGTTCGACGTGTCCCCA 42805 | | | | |||||| |||||| ||| ||||||||||| |||||||| |||| ||| Sbjct 193054 GTCTTCTTGAACGGGTTGAAGTGCGGGCCCGCCGACGTGCAGCCGTTCGAGTTGTCGCCA 192995 Query 42806 AACTCGTGTATGTGCAGACCGTG 42828 |||||||| | ||| | ||||| Sbjct 192994 AACTCGTGCACGTGGAATCCGTG 192972 >seq155 Length=76293 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || |||| || |||||||| || || || Sbjct 26897 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 26838 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | || | | |||||||||| |||||| ||||| | | Sbjct 26837 GATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTAACGTT 26778 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || |||||||| | ||||| || || ||||||| || || || Sbjct 26777 ATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAAC 26718 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 26717 GAAAATCTGCAT 26706 >seq2 Length=801100 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || |||||||| || | | ||| || |||| || Sbjct 378254 CACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTC 378195 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | ||||||||||| | || | || |||||||||| Sbjct 378194 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTG 378135 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||||| | |||| | | ||||| ||| |||||||| | ||||| || | Sbjct 378134 AATCTTCTGCTTGA-CGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTCT 378076 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || | || |||||||| |||||||| Sbjct 378075 TGCCGGTGAGGGTCTTCACAAAAATCTGCAT 378045 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || |||||||| || | | ||| || |||| || Sbjct 378482 CACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTC 378423 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | ||||||||||| | || | || |||||||||| Sbjct 378422 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTG 378363 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||||| | |||| | | ||||| ||| |||||||| | ||||| || | Sbjct 378362 AATCTTCTGCTTGA-CGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATGGTCT 378304 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || | || ||||| || |||||||| Sbjct 378303 TGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378273 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || |||| || |||||||| || || || Sbjct 378692 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 378633 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || |||||||||| ||||| ||||| | || Sbjct 378632 GATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGA-CGT 378574 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| ||| |||||||| | ||||| || || || || | || |||| Sbjct 378573 TGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCA 378514 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 378513 CGAAAATCTGCAT 378501 >seq1 Length=3302357 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || |||| || |||||||| || || || Sbjct 872051 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 871992 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | || | | |||||||||| |||||| ||||| | | Sbjct 871991 GATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTAACGTT 871932 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || |||||||| | ||||| || || ||||||| || || || Sbjct 871931 ATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAAC 871872 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 871871 GAAAATCTGCAT 871860 >seq153 Length=77323 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || || |||||||| || || || Sbjct 48243 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 48184 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || ||||||||| ||||| ||||| | || Sbjct 48183 GATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTGA-CGT 48125 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| ||| |||||||| | ||||| || || || || | || |||| Sbjct 48124 TGTCGATGGTGTCCGACGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTCA 48065 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 48064 CAAAAATCTGCAT 48052 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || |||| || |||||||| || || || Sbjct 48471 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 48412 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || ||||||||| ||||| ||||| | || Sbjct 48411 GATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTGA-CGT 48353 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || ||| |||||||| | ||||| || || || || | || |||| Sbjct 48352 TGTCGATGGTATCCGACGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCA 48293 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 48292 CGAAAATCTGCAT 48280 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | || || |||| || |||||||| || || || Sbjct 48699 CTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 48640 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || ||||||||| ||||| ||||| | || Sbjct 48639 GATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTGA-CGT 48581 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| ||| |||||||| | ||||| || || || || | || |||| Sbjct 48580 TGTCAATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCA 48521 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 48520 CGAAAATCTGCAT 48508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792320873160