Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq162 159 3e-34 seq153 136 4e-27 seq2 136 4e-27 seq151 132 5e-26 seq155 127 2e-24 seq1 127 2e-24 >seq162 Length=1352108 Score = 159 bits (176), Expect = 3e-34 Identities = 376/561 (67%), Gaps = 9/561 (2%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || ||| || || |||||||| | ||||||| |||||| ||||||||||| || | Sbjct 1304378 CAGCACCTGGTGATGCGCGTGTCCCTGGGCATCCACGGCTCGGACATTGACGCGGCGATC 1304319 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || |||||| | | ||||| | || || |||||||| ||||| || |||| | Sbjct 1304318 GAGACGTACAACCTCATGTCGTCAAAGTTCTTCACGCACGCGTCGCCGACGCTGTTCAAC 1304259 Query 7684 GCGGGCACAAACGCG--CCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACA 7741 ||||||| |||| || || | || ||||| || | | ||||| || |||| Sbjct 1304258 TCGGGCAC-GCCGCGTCCCGCAGCTCTCGTCGTGCTTCCTTGTGGCCATGTCGGATGACA 1304200 Query 7742 GCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCG 7801 ||||||| ||||| ||| |||||||| | ||||| | |||||||| ||| |||| Sbjct 1304199 GCATCGAGGGCATCTACGACACGCTGAAGGTGTGCGCGCAGATTTCCAAGAACGCTGGCG 1304140 Query 7802 GAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCG-TGTCCACCAAC 7860 | || || ||| |||| | | || | || || | || ||| | | ||||||| Sbjct 1304139 GCATTGGGCTGCACGTGAGCAACATCCGGGCTACGGGCTCATACATTGCAGGGCACCAAC 1304080 Query 7861 GGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTA 7920 || | | | ||| | | ||| ||| |||| |||||||| ||| ||| ||| | || Sbjct 1304079 GGCACGTCGAACGGGCTTGTGCCGATGCTGCGTGTGTTCAACAACACGGCGCGGTACGTC 1304020 Query 7921 GACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCG 7977 |||||||| || ||||| ||| || ||| |||||| ||||||||||||| || Sbjct 1304019 GACCAGGGCGGCAACAAGCGGCCAGGTGCGTTTGCGATCTATCTGGAGCCGTGGCATGCC 1303960 Query 7978 GACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGC 8037 || | | || | || ||||||| ||| || || || || ||| Sbjct 1303959 GATGTGTTTGCGTTCCTGGATCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGGGCCCGC 1303900 Query 8038 GATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATT-TCGACGC 8096 || || |||| | ||||| | || |||||||| |||| ||||| ||||| || || Sbjct 1303899 GACCTGTTCTATGCGCTGTGGATCCCGGATCTGTTCATGAAGCGCG-TCATTGCCGGCGG 1303841 Query 8097 ACAATGGTCGCTCATGTGCCC 8117 | |||||||| | ||||| Sbjct 1303840 CAAGTGGTCGCTGTTCTGCCC 1303820 >seq153 Length=77323 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || || ||||| || ||||||||||| | ||| | Sbjct 48725 AGGCGAAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGG 48666 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || || | |||||||| || ||||| |||||||| Sbjct 48665 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCC 48606 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || ||||| ||| | ||||| ||||| ||||| ||||| || Sbjct 48605 TTGTCCTGAATCTTCTGCTTGACGTTGTCAATGGTGTCCGACGACTCCACCTCGAGGGTG 48546 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || |||||||| ||||| Sbjct 48545 ATAGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 48508 Score = 132 bits (146), Expect = 5e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || || ||||| || ||||||||||| | |||| | Sbjct 48497 AGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGG 48438 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || || | |||||||| || ||||| |||||||| Sbjct 48437 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCC 48378 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || ||||| ||| | || || ||||| ||||| ||||| || Sbjct 48377 TTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTATCCGACGACTCCACCTCGAGGGTG 48318 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | || || |||||||| ||||| Sbjct 48317 ATAGTCTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 48280 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || || ||||| || ||||||||||| | |||| | Sbjct 48269 AGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGG 48210 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| || || || | |||||||| || ||||| |||||||| Sbjct 48209 CCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCC 48150 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || ||||| ||| | ||||| ||||| ||||| || || || Sbjct 48149 TTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCAAGGGTG 48090 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || || ||||| ||||| Sbjct 48089 ATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 48052 >seq2 Length=801100 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || || || ||||| || ||||||||||| | |||| | Sbjct 378490 AGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGG 378431 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || || | |||||||| || ||||| ||||| || Sbjct 378430 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCC 378371 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || ||||| ||| | ||||| ||||| ||||| ||||| || Sbjct 378370 TTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTG 378311 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| | || || |||||||| ||||| Sbjct 378310 ATGGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378273 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || || ||||| || ||||||||||| | |||| | Sbjct 378718 AGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGG 378659 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || || | |||||||| || ||||| ||||| || Sbjct 378658 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCC 378599 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || ||||| ||| | ||||| ||||| ||||| ||||| || Sbjct 378598 TTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTG 378539 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || |||||||| ||||| Sbjct 378538 ATAGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378501 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || || || ||||| || ||||||||||| | |||| | Sbjct 378262 AGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGG 378203 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || || | |||||||| || ||||| ||||| || Sbjct 378202 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCC 378143 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || ||||| ||| | ||||| ||||| ||||| ||||| || Sbjct 378142 TTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTG 378083 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || || ||||| ||||| Sbjct 378082 ATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 378045 >seq151 Length=1709611 Score = 132 bits (146), Expect = 5e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || || || ||||| || ||||||||||| || |||| | Sbjct 449775 AGGCGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 449716 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || || | |||||||| || || || ||||| || Sbjct 449715 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCC 449656 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || ||||| ||| | ||||| ||||| ||||| || || || Sbjct 449655 TTGTCCTGGATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCAAGGGTG 449596 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | || || |||||||| ||||| Sbjct 449595 ATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTGCAT 449558 >seq155 Length=76293 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || || ||||| || ||||||||||| || |||| | Sbjct 26923 AGGCGGAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 26864 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || |||| |||||||| || || || || || || Sbjct 26863 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCC 26804 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || || | |||||||| || ||||| ||||| || Sbjct 26803 TTGTCCTGGATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 26744 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | || ||||||||||| ||||| Sbjct 26743 ATGGTCTTGCCCGTCAGGGTCTTAACGAAAATCTGCAT 26706 >seq1 Length=3302357 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || || ||||| || ||||||||||| || |||| | Sbjct 872077 AGGCGGAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 872018 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || |||| |||||||| || || || || || || Sbjct 872017 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCC 871958 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || || | |||||||| || ||||| ||||| || Sbjct 871957 TTGTCCTGGATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 871898 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | || ||||||||||| ||||| Sbjct 871897 ATGGTCTTGCCCGTCAGGGTCTTAACGAAAATCTGCAT 871860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396965932040