Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq217 100 4e-16 >seq217 Length=908848 Score = 100 bits (110), Expect = 4e-16 Identities = 128/175 (73%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| | |||||| ||||| || |||||||| || | | || | ||||| || Sbjct 400052 AACAGCACGCAGGCAAAGTCCGTGTGCAGGCCCTCGTCGCGGCAGATCAGCTCGTTCGAG 400111 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || ||||||||||| || || ||||| |||||||| || || | ||||| || || Sbjct 400112 AAGGTCAGTCCAGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATCGACGCAAACGAGCCC 400171 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG 39782 || ||||||||||| || || || ||||| || || || | | | ||| |||||| Sbjct 400172 GAGAAGAAGATGCCCTCGACCGCCGCAAAGGCCACCAGGCGCACGCCG-AACTTG 400225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906850896280