Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq162 194 2e-44 seq160 158 1e-33 seq217 107 2e-18 >seq162 Length=1352108 Score = 194 bits (214), Expect = 2e-44 Identities = 1112/1749 (64%), Gaps = 61/1749 (3%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || ||||| ||||||| ||||||| | || | |||||| || | | Sbjct 1302652 CGCAGGTAGTACATGCCGGTCTTCAGCCCCTTCTTCCAGCCGTAGAAATGCATCGACGTC 1302711 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | ||| | | | || | |||||| || ||||| ||| || || ||| || Sbjct 1302712 AGCTTCTGGTAGTTGGGCCCGTCCATGTGGATGTTCAGCGACTGGCTCTGGTCAATGTAG 1302771 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTG 118016 || |||||||||||||| ||||| | ||||| |||||| || |||| ||| || Sbjct 1302772 GCGCCACGATCCGCCGCCATGTCAATGATGACCTTCTGCTTGATCTCATACACGGTCTTG 1302831 Query 118017 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCC---ACCCGCC 118073 | ||| ||| | || || || | || | | | || | || || |||| Sbjct 1302832 TGCAGGCGCTTCAGGTCCTCGGGAACCTCGTCCAGCTGCTGCACCGAACCGTTGGCCGCA 1302891 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133 | | | | | || | || || ||| || || | ||| ||| || Sbjct 1302892 ATAAGCCGCTGGCGCATCGTGTCGTT---CCACAGCCCGCGGTCCACGAGGTCCCGCAGC 1302948 Query 118134 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 118193 || || ||||| || ||||| || || ||| ||| | | ||||| |||| | Sbjct 1302949 AGCCACTGGTTGACCACCTGGAACTCGCCGGCCAGGACGCGGCGCGTGTAGATGTTGGAC 1303008 Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| |||||||||||||| ||| || | ||| || | ||| || |||||||||||| Sbjct 1303009 GTGTACGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGCGATGTCGACGCTGTGGGCATG 1303068 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTT--CCTTGAGAGCGT 118311 || |||| || || ||| || | || | |||| | | || || ||| |||| Sbjct 1303069 GGGGCCACAAGCAGCGAGTTGCGCACGCCGTGCTCCCGCA--CCTTGGCCCGGAGCGCGT 1303126 Query 118312 CCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGG 118371 ||||||| || | | | | || | ||||| ||| ||| || | || | | Sbjct 1303127 CCCAGTCCCAGCGGTCCGACGGCGCCACGCCCCACAGATCCGGCTGCAGCTTGCCCTTCG 1303186 Query 118372 ACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG 118431 || || |||| | ||||| || | ||| | || |||||| || | || Sbjct 1303187 ACATCGGGCTGCCCTGGTACGTCTCGTAGGCGCCGTGGACGGCCGCCAGCTCACACGACG 1303246 Query 118432 CCTCGAGGGCTGCGTGATACATTGTTTCAAAAAT-GCGAGCATTCA--TTGCCTTGGCCT 118488 ||||||| || || || || || || || || || ||| | |||| | || | |||| Sbjct 1303247 CCTCGAGCGCCGCATGGTAGATGGTCTCGAAGATGGCGCG-GTTCAGCTCGCGT--GCCT 1303303 Query 118489 C-GTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 118547 | | | || || |||| | || | || |||| || || || || || || Sbjct 1303304 CAGGCCGACTCGAACGGCATGCGCATGGCGAGGAAGGCATCAGCCAGCCCCTGAACTCCA 1303363 Query 118548 AGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAA 118604 | ||| || || || || | ||| || || | || ||||| ||| || || || Sbjct 1303364 ATGCCGATGGGACGGTGGCGCATGTT--GCTGCGGACGCGTCTCGGGCACCGGGTAGAAG 1303421 Query 118605 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 118664 || | ||||| | | | || || || |||||||| ||||| |||| || || |||| Sbjct 1303422 TTGATGTCGATGATCTTGTTCAGGTTCTTGGTGACCACCTTGGTGACGTCGTGCAGCTGC 1303481 Query 118665 TCGTAATCAAAACTGCGAGTC-TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 118723 | | | || ||| || ||| | |||||| || || || || || |||||||| Sbjct 1303482 TGGAAGTC-GTACT-CG-GTCGGCCGACTTGACAAACGACGGCAGCGCAATCGACGCCAG 1303538 Query 118724 ATTACACACAGAGGTCTCATCCT----TATCAGTGTACTCTATAATTTCCGTGCACAAGT 118779 || ||||| ||| | | || | || | |||||| | || || ||||||| || Sbjct 1303539 GTTGCACAC--AGGCCACCTCGTCGGGGCTC-GAGTACTCGACGATCTCTGTGCACAGGT 1303595 Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839 | || | ||| || ||||| | ||||| || || ||||| ||| || |||||||||| Sbjct 1303596 TCGAGCACTTGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCATGCATCCTTGT 1303655 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGG 118899 | |||||| | || |||||||||| | || | | || || || | || ||| | Sbjct 1303656 ACAGCATGAACGGGTTCCCCGTCTCGATCTGCGCGTCCAGGATCGCATACC--ACAGCTT 1303713 Query 118900 CAGCTGGCACAGTGG-CGTTGGCTC---GCC---CCTCTTCCTCGTACTTTGTGTAGAGG 118952 | | || | ||| || || | ||| | | || ||||||||| || || ||| Sbjct 1303714 CTG-TGCGTCGATGGTCGAGCGCGCCAGGCCAGGCGTGTT-CTCGTACTTGGTATACAGG 1303771 Query 118953 GCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGA 119012 || |||||||| || ||| |||| | || ||||||| | |||||||| || Sbjct 1303772 GCCTCAAACTCATCGCCCCACACCTCCTGCATGCCGGGTGCCTCGTGCGGGCAGAACAGC 1303831 Query 119013 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAG 119072 ||||| | || || | || ||||||||||| || || |||||||| ||||| || Sbjct 1303832 GACCACTTGCCGCCGGCAATGACGCGCTTCATGAACAGATCCGGGATCCACAGCGCATAG 1303891 Query 119073 AAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 119132 || || || || || | || || | || || || |||| |||| || | Sbjct 1303892 AACAGGTCGCGGGCCCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGATCCAGGAACGCA 1303951 Query 119133 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA------TTGACCCCTTACGACGA 119186 | | ||| || |||||||| ||||| || | ||| | || || ||| | | Sbjct 1303952 AACACATCGGCATGCCACGGCTCCAGATAGATCGCAAACGCACCTGGCCGCTT--GTTG- 1304008 Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246 || |||||| || |||| ||| ||| ||| || ||||| ||||| || | | || Sbjct 1304009 CCGCCCTGGTCGACGTACCGCGCCGTGTTGTTGAACACACGCAGCATCGGCACAAGCCCG 1304068 Query 119247 TCGGATTGGCCATTTGTCCCCCGAA---TACGAGACTTATTGGCTCTGACATCGTGGATG 119303 | || ||| || || ||| | | || ||| | | || | || | | | | Sbjct 1304069 TTCGACGTGCCGTTGGTGCCCTGCAATGTATGAGCC--CGTAGCCCGGATGTTGCTCACG 1304126 Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363 |||| ||||| || || || ||| || || ||||||||| || | || || ||||| Sbjct 1304127 TGCAGCCCAATGCCGCCAGCGTTCTTGGAAATCTGCGCGCACACCTTCAGCGTGTCGTAG 1304186 Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG-AGGCCT 119422 || || ||||| |||| || | || | |||||||| ||| | || || | Sbjct 1304187 ATGCCCTCGATGCTGTCATCCGACATGGCCACAAGGAAGCACGACGAGAGCTGCGGGACG 1304246 Query 119423 GGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG-GGACATCT 119481 || || || | |||||| || || || | |||||| |||| | || ||| ||||| Sbjct 1304247 CGGCGTGCCCGAGTTGAACAGCGTCGGCGACGCGTGCGTGAAGA-ACTTTGACGACATGA 1304305 Query 119482 TGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCA 119541 || ||| ||||| | | ||| |||||| ||||| || || | || || |||| Sbjct 1304306 GGTTGTACGTCTCGATCGCCGCGTCAATGTCCGAGCCGTGGATGCCCAGGGACACGCGCA 1304365 Query 119542 TAAACATGT 119550 | | || || Sbjct 1304366 TCACCAGGT 1304374 >seq160 Length=71855 Score = 158 bits (174), Expect = 1e-33 Identities = 809/1265 (64%), Gaps = 40/1265 (3%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || ||||| ||||||| ||||||| | || | |||||| || | | Sbjct 70566 CGCAGGTAGTACATGCCGGTCTTCAGCCCCTTCTTCCAGCCGTAGAAATGCATCGACGTC 70625 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | ||| | | | || | |||||| || ||||| ||| || || ||| || Sbjct 70626 AGCTTCTGGTAGTTGGGCCCGTCCATGTGGATGTTCAGCGACTGGCTCTGGTCAATGTAG 70685 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTG 118016 || |||||||||||||| ||||| | ||||| |||||| || |||| ||| || Sbjct 70686 GCGCCACGATCCGCCGCCATGTCAATGATGACCTTCTGCTTGATCTCATACACGGTCTTG 70745 Query 118017 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCAC---CCGCC 118073 | ||| ||| | || || || | || | | | || | || || |||| Sbjct 70746 TGCAGGCGCTTCAGGTCCTCGGGAACCTCGTCCAGCTGCTGCACCGAACCGTTGGCCGCA 70805 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133 | | | | | || | || || ||| || || | ||| ||| || Sbjct 70806 ATAAGCCGCTGGCGCATCGTGTCGTT---CCACAGCCCGCGGTCCACGAGGTCCCGCAGC 70862 Query 118134 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 118193 || || ||||| || ||||| || || || ||| | | ||||| |||| | Sbjct 70863 AGCCACTGGTTGACCACCTGGAACTCGCCGGCCAGAC-GCGGCGCGTGTAGATGTTGGAC 70921 Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| |||||||||||||| ||| || | ||| || | ||| || |||||||||||| Sbjct 70922 GTGTACGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGCGATGTCGACGCTGTGGGCATG 70981 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTT--CCTTGAGAGCGT 118311 || |||| || || ||| || | || | |||| | | || || ||| |||| Sbjct 70982 GGGGCCACAAGCAGCGAGTTGCGCACGCCGTGCTCCCGCA--CCTTGGCCCGGAGCGCGT 71039 Query 118312 CCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGG 118371 ||||||| || | | | | || | ||||| ||| ||| || | || | | Sbjct 71040 CCCAGTCCCAGCGGTCCGACGGCGCCACGCCCCACAGATCCGGCTGCAGCTTGCCCTTCG 71099 Query 118372 ACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG 118431 || || |||| | ||||| || | ||| | || |||||| || | || Sbjct 71100 ACATCGGGCTGCCCTGGTACGTCTCGTAGGCGCCGTGGACGGCCGCCAGCTCACACGACG 71159 Query 118432 CCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCA-TTCA--TTGCCTTGGCCT 118488 ||||||| || || || || || || || || ||| | || |||| | || | |||| Sbjct 71160 CCTCGAGCGCCGCATGGTAGATGGTCTCGAAGATG-GCGCGGTTCAGCTCGCGT--GCCT 71216 Query 118489 CGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 118548 | | || || |||| | || | || |||| || || || || || || | Sbjct 71217 CAGCCGACTCGAACGGCATGCGCATGGCGAGGAAGGCATCAGCCAGCCCCTGAACTCCAA 71276 Query 118549 GGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAAT 118605 ||| || || || || | ||| || | ||| ||||| ||| || || || | Sbjct 71277 TGCCGATGGGACGGTG-CGCATGTTGC---TGCGACGCGTCTCGGGCACCGGGTAGAAGT 71332 Query 118606 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 118665 | | ||||| | | | || || || |||||||| ||||| |||| || || |||| | Sbjct 71333 TGATGTCGATGATCTTGTTCAGGTTCTTGGTGACCACCTTGGTGACGTCGTGCAGCTGCT 71392 Query 118666 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 118725 | | || | || || ||| | | |||||| || || || || || |||||||| | Sbjct 71393 GGAAGTCGTA-CT-CG-GTCGCGAC-TTGACAAACGACGGCAGCGCAATCGACGCCAGGT 71448 Query 118726 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAAC 118785 | ||||||| ||| || | |||||| | || || ||||||| ||| || | Sbjct 71449 TGCACACAGCCACCTCGTCGGGGCTCGAGTACTCGACGATCTCTGTGCACAGGTTCGAGC 71508 Query 118786 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 118845 ||| || ||||| | ||||| || || ||||| ||| || ||||||||||| |||| Sbjct 71509 ACTTGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCATGCATCCTTGTACAGCA 71568 Query 118846 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTG 118905 || | || |||||||||| | || | | || || || | || ||| | | | || Sbjct 71569 TGAACGGGTTCCCCGTCTCGATCTGCGCGTCCAGGATCGCATACC--ACAGCTTCTG-TG 71625 Query 118906 GCACAGTGG-CGTTGGCTC---GCC---CCTCTTCCTCGTACTTTGTGTAGAGGGCTTCA 118958 | ||| || || | ||| | | || ||||||||| || || ||||| ||| Sbjct 71626 CGTCGATGGTCGAGCGCGCCAGGCCAGGCGTGTT-CTCGTACTTGGTATACAGGGCCTCA 71684 Query 118959 AACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCAT 119018 ||||| || ||| |||| | || ||||||| | |||||||| || ||| | Sbjct 71685 AACTCATCGCCCCACACCTCCTGCATGCCGGGTGCCTCGTGCGGGCAGAACAGCGACACT 71744 Query 119019 TGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGA 119078 || || || | || ||||||||||| || || |||||||| ||||| |||| || Sbjct 71745 TG-CCGCCGGCAATGACGCGCTTCATGAACAGATCCGGGATCCACAGCGCATAGAACAGG 71803 Query 119079 TCCCG 119083 || || Sbjct 71804 TCGCG 71808 >seq217 Length=908848 Score = 107 bits (118), Expect = 2e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| ||| ||| || |||||||| ||| |||| || || ||||||||| ||| || Sbjct 400063 GGCAAAGTCCGTGTGCAGGCCCTCGTCGCGGCAGATCAGCTCGTTCGAGAAGGTCAGTCC 400122 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| || || |||||||| | |||||| |||| ||| ||||| ||||||||||| Sbjct 400123 AGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATCGACGCAAACGAGCCCGAGAAGAAGAT 400182 Query 130135 CCCCTCCAC 130143 ||||| || Sbjct 400183 GCCCTCGAC 400191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433445190120