Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq151 127 6e-24 seq153 120 9e-22 seq2 102 2e-16 seq155 100 9e-16 seq1 100 9e-16 seq68 98.7 3e-15 >seq151 Length=1709611 Score = 127 bits (140), Expect = 6e-24 Identities = 325/492 (66%), Gaps = 2/492 (0%) Strand=Plus/Minus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 || || || || ||||| || || || || || || | ||||| || || || || Sbjct 324387 GACGCCGTCATCACTGTGCCTGCGTACTTCAACGACTCGCAGCGCCAGGCCACCAAGGAC 324328 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || || ||| |||| | || || || | || || || || ||||| || || || Sbjct 324327 GCCGGTCTGATTTCGGGCCTGAACGTCCTGCGTATCATCAACGAGCCCACCGCCGCCGCC 324268 Query 349727 ATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 ||||| || || || || || | || ||| || || || || || ||||| ||| | Sbjct 324267 ATTGCCTACGGTCTGGACAAGAAGACCGACGGCGAGAAGAACATCCTCATTTTCGATCTG 324208 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAA 349846 || || ||||| |||||||| || || || | | || || || || || || || || Sbjct 324207 GGAGGCGGTACCTTTGATGTGTCGCTGCTGTCGATCGAGGACGGCATCTTCGAGGTCAAG 324148 Query 349847 GCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCAT 349906 || ||||||||||| || ||||||||||| || || ||||| || || || || || Sbjct 324147 GCCACTGCTGGTGACACCCATCTTGGTGGTGAGGACTTTGACAACCGCCTGGTCAACCAC 324088 Query 349907 TTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAAT 349965 ||||| | || || ||||| |||| || | || || | || || | | | Sbjct 324087 TTTGTCCAGGAGTTCAAGCG-CAAGAACAAGAAGGACATCTCGGGCAACCCCCGCTCCCT 324029 Query 349966 GCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAAC 350025 ||| || || | ||||| || || || || ||||| || | || || || |||| || Sbjct 324028 GCGCCGTCTGCGCACTGCCTGCGAGCGCGCCAAGCGCACCCTGTCGTCGTCTGCCCAGAC 323969 Query 350026 CTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGC 350085 ||| || || || || || || || |||| || |||| | || || || ||||| Sbjct 323968 CTCGATCGAGATCGACTCGCTGTTCGAGGGCATCGACTTCTACACCTCGATCACGCGTGC 323909 Query 350086 TCGGTTTGAAGA 350097 || || || || Sbjct 323908 GCGCTTCGAGGA 323897 Score = 96.9 bits (106), Expect = 1e-14 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || || || || ||||| || || || || || || || Sbjct 449785 ACCACCACGCAGGCGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 449726 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || || || || || || || || || ||||| || || ||||| ||||| || Sbjct 449725 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGG 449666 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| || || || ||||| || || || || || || || | || || | || || Sbjct 449665 AATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCAC 449606 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || || ||||||||||| Sbjct 449605 CTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTGCAT 449558 >seq153 Length=77323 Score = 120 bits (132), Expect = 9e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || || || || ||||| ||||| || || || || || || Sbjct 48282 CATACCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTC 48223 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || || || ||||| || || ||||| ||||| Sbjct 48222 CGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGG 48163 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || |||||||| || || || || || || | || || | || Sbjct 48162 CGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTC 48103 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| ||||| || || || |||||||||||||| Sbjct 48102 CACCTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 48052 Score = 105 bits (116), Expect = 2e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || || || || ||||| ||||| || || || || || || Sbjct 48510 CATACCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTC 48451 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || ||||| || || ||||| ||||| Sbjct 48450 CGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGG 48391 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || |||||||| || || || || || || | ||| || | || Sbjct 48390 CGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTATCCGACGACTC 48331 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| || || || || || || ||||||||||| Sbjct 48330 CACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 48280 Score = 104 bits (114), Expect = 7e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || ||||| ||||| || || || || || || || | || || || || Sbjct 48719 AGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCGTCC 48660 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || || || ||||| || || ||||| ||||| || || ||||| || ||| Sbjct 48659 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC 48600 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || || || || ||||| | || || | || || || || || | ||| Sbjct 48599 TGAATCTTCTGCTTGACGTTGTCAATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTC 48540 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || || || ||||||||||| Sbjct 48539 TTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 48508 >seq2 Length=801100 Score = 102 bits (112), Expect = 2e-16 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || || | || ||||| ||||| || || || || || || Sbjct 378275 CATACCACCGCGCAGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTC 378216 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || ||||| || || ||||| ||||| Sbjct 378215 CGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGG 378156 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || |||||||| || || || || || || | || || | || Sbjct 378155 CGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTC 378096 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| ||||| || || || |||||||||||||| Sbjct 378095 CACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 378045 Score = 96.9 bits (106), Expect = 1e-14 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || || | || ||||| ||||| || || || || || || Sbjct 378503 CATACCACCGCGCAGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTC 378444 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || ||||| || || ||||| ||||| Sbjct 378443 CGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGG 378384 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || |||||||| || || || || || || | || || | || Sbjct 378383 CGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTC 378324 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| ||||| || || || || ||||||||||| Sbjct 378323 CACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378273 Score = 95.1 bits (104), Expect = 4e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || ||||| ||||| || || || || || || || | || || || || Sbjct 378712 AGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 378653 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || || || ||||| || || ||||| ||||| || || || || || ||| Sbjct 378652 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 378593 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || || || || || || | || || | || || || || || | ||| Sbjct 378592 TGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTC 378533 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || || || ||||||||||| Sbjct 378532 TTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378501 >seq155 Length=76293 Score = 100 bits (110), Expect = 9e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || || ||||| || ||||| || || || || || || Sbjct 26935 ATACCACCACGCAGGCGGAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCC 26876 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || || || || || || || || || ||||| || || ||||| ||||| Sbjct 26875 GAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGG 26816 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || || || || || ||||| || || || || ||||| || | || || | || Sbjct 26815 GGGATACCCTCCTTGTCCTGGATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCC 26756 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| || || || || || || ||||||||||| Sbjct 26755 ACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAAAATCTGCAT 26706 >seq1 Length=3302357 Score = 100 bits (110), Expect = 9e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || || ||||| || ||||| || || || || || || Sbjct 872089 ATACCACCACGCAGGCGGAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCC 872030 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || || || || || || || || || ||||| || || ||||| ||||| Sbjct 872029 GAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGG 871970 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || || || || || ||||| || || || || ||||| || | || || | || Sbjct 871969 GGGATACCCTCCTTGTCCTGGATCTTCTGCTTAACGTTATCGATGGTGTCGGAAGACTCC 871910 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| || || || || || || ||||||||||| Sbjct 871909 ACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAAAATCTGCAT 871860 >seq68 Length=346515 Score = 98.7 bits (108), Expect = 3e-15 Identities = 109/142 (77%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 377447 TTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGT 377506 || |||||| || ||||| ||| | || || ||| | || || ||||| ||||||| Sbjct 313471 TTCCTTCAAA-CGCGGCACTCCAAGGGTGACGTTCT-TGGAGCTG--ACACCGGCAAAGT 313416 Query 377507 GGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGC 377566 |||| || || || || | || || | ||||||||||| |||||||| |||||||||| Sbjct 313415 GGAACGTGTTTAGCGTCATCTGCGTGGCCGGCTCACCAATCGACTGCGCAGCAATAACGC 313356 Query 377567 CAACCATTTCTCCAGGATTGAC 377588 ||||||| || ||||| ||||| Sbjct 313355 CAACCATCTCACCAGGGTTGAC 313334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515249992977281