Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq162 226 3e-54 seq160 150 2e-31 seq217 147 2e-30 seq24 102 9e-17 seq210 96.9 4e-15 >seq162 Length=1352108 Score = 226 bits (250), Expect = 3e-54 Identities = 417/597 (70%), Gaps = 16/597 (3%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTACGA 53253 |||||||| || |||| |||||||| ||| | ||||| | ||||||||| | Sbjct 1304366 ATGCGCGTGTCCCTGGGCATCCACGGCTCGGACATTGACGCG-GCGATCGAGACGTACAA 1304308 Query 53254 CTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA 53313 | | ||| ||||| ||| |||||||| |||| || ||||||||| | || ||| Sbjct 1304307 CCTCATGTCGTCAAAGTTCTTCACGCACGCGTCGCCGACGCTGTTCAACTCGGGCACGCC 1304248 Query 53314 TCA-CCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 | ||| ||| | ||| |||||||| ||||| ||| ||||||| ||||| |||| Sbjct 1304247 GCGTCCCGCAGCTCTCGTCGTGCTTCCTTGTGGCCATGTCGGATGACAGCATCGAGGGCA 1304188 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| ||||| |||| ||| || || || |||||| | || || || || | | Sbjct 1304187 TCTACGACACGCTGAAGGTGTGCGCGCAGATTTCCAAGAACGCTGGCGGCATTGGGCTGC 1304128 Query 53433 AC-TGCTCGAACGTCCGTGCGAACGGCACAC-CAATCAAGGGGACGAACGGCGTCGCCGA 53490 || || | ||| |||| || | ||| || || | |||| || |||||| || ||| Sbjct 1304127 ACGTGAGC-AACATCCGGGCTACGGGCTCATACATTGCAGGGCACCAACGGCA-CGTCGA 1304070 Query 53491 T-GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 || | ||||| ||||| || || |||||||||||||| ||||||||| ||||||| | Sbjct 1304069 ACGGGCTTGTGCCGATGCTGCGTGTGTTCAACAACACGGCGCGGTACGTCGACCAGGGCG 1304010 Query 53550 GTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608 | ||||| | ||| | |||| || ||||| || ||||||||||| ||||| | | Sbjct 1304009 GCAACAAGCGGCCAGGTG-CGTTTGCGATCTATCTGGAGCCGTGGCATGCCGATGTGTTT 1303951 Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTT 53668 | ||| || || ||||| ||| || || | || ||| |||| ||| |||||||| Sbjct 1303950 GCGTTCCTGGATCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGGGCCCGCGACCTGTTC 1303891 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG---AGTGG 53725 || |||||||| ||||| || |||||| ||| | | | || | ||||| Sbjct 1303890 TATGCGCTGTGGATCCCGGATCTGTTCATG---AAGCGCGTCATTGCCGGCGGCAAGTGG 1303834 Query 53726 TACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTT 53782 | ||| | |||||| ||||| |||||| | |||| || | || || |||||| Sbjct 1303833 TCGCTGTTCTGCCCGCACGAGGCACCCGGCATGCAGGAGGTGTGGGGCGATGAGTTT 1303777 Score = 161 bits (178), Expect = 1e-34 Identities = 559/852 (66%), Gaps = 54/852 (6%) Strand=Plus/Minus Query 55107 AGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAATT 55166 |||| ||||| || || || || || |||||||||| | ||||||||| || | Sbjct 1303479 AGCTGCACGACGTCACCAAGGTGGTCACCAAGAACCTGAACAAGATCATCGACATCAACT 1303420 Query 55167 ACTACCCGA---CTGAAGCG-GCGCGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATC 55222 ||||||| | || || | |||| |||| | || ||||| ||||||| ||| Sbjct 1303419 TCTACCCGGTGCCCGAGACGCGTCCGCAG---CAACATGCGCCACCGTCCCATCGGCATT 1303363 Query 55223 GGTGTACAGGGCTTGGCCGACATCTTCATG---ATGCTCGGATTGCCCTTCGACTCGGAA 55279 || || ||||| |||| || |||| | |||| | |||| ||||| |||| Sbjct 1303362 GGAGTTCAGGGGCTGGCTGATGCCTTCCTCGCCATGCGCA---TGCCGTTCGAGTCGG-- 1303308 Query 55280 CCTG---CTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGA 55335 |||| | || || | |||| | ||||||| || | ||||||| ||| |||||||| Sbjct 1303307 CCTGAGGCACGCGAGCTGAACCGCGCCATCTTCGAGAC-CATCTACCATGCGGCGCTCGA 1303249 Query 55336 GGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGC 55395 || ||||||| | ||||| | | || |||||||||||| || | ||| | Sbjct 1303248 GGCGTCGTGTGAGCTGGCGGCCGTCCACGGCGCCTACGAGACGTACCAGGGCA-GCCCGA 1303190 Query 55396 TGAC-AAGGGACTTCTCCAGTTCGATCTATGGGGCAAG------TCTGACCCCATGTTTG 55448 || | ||||| || ||| ||||| |||||| | || |||| | | | Sbjct 1303189 TGTCGAAGGGCAAGCTGCAGCCGGATCTGTGGGGCGTGGCGCCGTCGGACCGCTGG---G 1303133 Query 55449 ACAAGTTGAAGCATGACATTC--ACTTGTGGG------GCCTACGCAACTCCCTGCTCGT 55500 || | || || | | | || ||| || | |||||||| ||||| || Sbjct 1303132 ACTGG--GACGCGCTCCGGGCCAAGGTGCGGGAGCACGGCGTGCGCAACTCGCTGCTTGT 1303075 Query 55501 GGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCC 55560 ||| || ||||| || |||||||| | |||||| | ||| ||||||| || ||||| Sbjct 1303074 GGCCCCCATGCCCACAGCGTCGACATCGCAGATCCTCGGCTTCAACGAGTGCTTTGAGCC 1303015 Query 55561 GTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAA 55620 ||||||| ||||||||||| |||||| ||| || || ||||| || ||||| | Sbjct 1303014 GTACACGTCCAACATCTACACGCGCCGCGTCCTGGCCGGCGAGTTCCAGGTGGTCAACCA 1302955 Query 55621 GCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGAT---CAAGACGGA 55677 | || | |||||| | | | ||||||| ||| | || | Sbjct 1302954 GTGGCTGCTGCGGGACCTCGTGGACCGCGGGCTGTGGAACGACACGATGCGCCAGCGGCT 1302895 Query 55678 TATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGA---GATTCCTCTGCGTCTCAAGGA 55734 ||||| | ||||| || || ||| | ||||| | |||| | || ||| Sbjct 1302894 TATTGCGGCCAACGGT---TCGGTGCAGCAGCTGGACGAGGTTCCCGAGGACCTGAAGCG 1302838 Query 55735 GATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTC-TGATTGACATGAGTGCTGATC 55793 | || ||| |||| ||||| |||||| ||| | ||||||||| || |||| Sbjct 1302837 CCTGCACAAGACCGTGTATGAGATCAAGCAGAAG-GTCATCATTGACATGGCGGCGGATC 1302779 Query 55794 GTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGG 55853 |||| || ||||| |||||| |||||| ||||||||| |||||| || ||| Sbjct 1302778 GTGGCGCCTACATTGACCAGAGCCAGTCGCTGAACATCCACATGGACGGGCCCA-ACTAC 1302720 Query 55854 CC-AAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTAC 55912 | ||| ||| |||||||| || ||||| ||||||||||| || ||||| || |||||| Sbjct 1302719 CAGAAGCTGACGTCGATGCATTTCTACGGCTGGAAGAAGGGGCTGAAGACCGGCATGTAC 1302660 Query 55913 TATCTGCGGACC 55924 || ||||| ||| Sbjct 1302659 TACCTGCGCACC 1302648 >seq160 Length=71855 Score = 150 bits (166), Expect = 2e-31 Identities = 554/848 (65%), Gaps = 50/848 (6%) Strand=Plus/Minus Query 55107 AGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAATT 55166 |||| ||||| || || || || || |||||||||| | ||||||||| || | Sbjct 71389 AGCTGCACGACGTCACCAAGGTGGTCACCAAGAACCTGAACAAGATCATCGACATCAACT 71330 Query 55167 ACTACCCGA---CTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCG 55223 ||||||| | || || |||| |||| | || ||||| ||||||| ||| | Sbjct 71329 TCTACCCGGTGCCCGAGACGCGTCGCAG---CAACATGCG-CACCGTCCCATCGGCATTG 71274 Query 55224 GTGTACAGGGCTTGGCCGACATCTTCATG---ATGCTCGGATTGCCCTTCGACTCGGAAC 55280 | || ||||| |||| || |||| | |||| | |||| ||||| |||| Sbjct 71273 GAGTTCAGGGGCTGGCTGATGCCTTCCTCGCCATGCGCA---TGCCGTTCGAGTCGGCTG 71217 Query 55281 CTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGAG 55339 || || || | |||| | ||||||| || | ||||||| ||| |||||||||| | Sbjct 71216 AGGCACGCGAGCTGAACCGCGCCATCTTCGAGAC-CATCTACCATGCGGCGCTCGAGGCG 71158 Query 55340 TCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGCTGAC 55399 |||||| | ||||| | | || |||||||||||| || | ||| | || | Sbjct 71157 TCGTGTGAGCTGGCGGCCGTCCACGGCGCCTACGAGACGTACCAGGGCA-GCCCGATGTC 71099 Query 55400 -AAGGGACTTCTCCAGTTCGATCTATGGGGCAAG------TCTGACCCCATGTTTGACAA 55452 ||||| || ||| ||||| |||||| | || |||| | | ||| Sbjct 71098 GAAGGGCAAGCTGCAGCCGGATCTGTGGGGCGTGGCGCCGTCGGACCGCTGG---GACTG 71042 Query 55453 GTTGAAGCATGACATTC--ACTTGTGGG------GCCTACGCAACTCCCTGCTCGTGGCG 55504 | || || | | | || ||| || | |||||||| ||||| ||||| Sbjct 71041 G--GACGCGCTCCGGGCCAAGGTGCGGGAGCACGGCGTGCGCAACTCGCTGCTTGTGGCC 70984 Query 55505 CCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGTAC 55564 || ||||| || |||||||| | |||||| | ||| ||||||| || ||||||||| Sbjct 70983 CCCATGCCCACAGCGTCGACATCGCAGATCCTCGGCTTCAACGAGTGCTTTGAGCCGTAC 70924 Query 55565 ACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAGCAC 55624 ||| ||||||||||| |||||| | | || || ||||| || ||||| || Sbjct 70923 ACGTCCAACATCTACACGCGCCGCGTC-TGGCCGGCGAGTTCCAGGTGGTCAACCAGTGG 70865 Query 55625 CTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGAT---CAAGACGGATATT 55681 || | |||||| | | | ||||||| ||| | || | |||| Sbjct 70864 CTGCTGCGGGACCTCGTGGACCGCGGGCTGTGGAACGACACGATGCGCCAGCGGCTTATT 70805 Query 55682 GTGCGGAACGGGGGGTCCGTCCAGAATCTGGA---GATTCCTCTGCGTCTCAAGGAGATT 55738 | | ||||| || || ||| | ||||| | |||| | || ||| | Sbjct 70804 GCGGCCAACGGT---TCGGTGCAGCAGCTGGACGAGGTTCCCGAGGACCTGAAGCGCCTG 70748 Query 55739 TACCGGACGGTGTGGGAGATTCCACAGAAGAGTC-TGATTGACATGAGTGCTGATCGTGG 55797 || ||| |||| ||||| |||||| ||| | ||||||||| || |||||||| Sbjct 70747 CACAAGACCGTGTATGAGATCAAGCAGAAG-GTCATCATTGACATGGCGGCGGATCGTGG 70689 Query 55798 TGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCC-A 55856 || ||||| |||||| |||||| ||||||||| |||||| || ||| | | Sbjct 70688 CGCCTACATTGACCAGAGCCAGTCGCTGAACATCCACATGGACGGGCCCA-ACTACCAGA 70630 Query 55857 AGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATC 55916 || ||| |||||||| || ||||| ||||||||||| || ||||| || |||||||| | Sbjct 70629 AGCTGACGTCGATGCATTTCTACGGCTGGAAGAAGGGGCTGAAGACCGGCATGTACTACC 70570 Query 55917 TGCGGACC 55924 |||| ||| Sbjct 70569 TGCGCACC 70562 >seq217 Length=908848 Score = 147 bits (162), Expect = 2e-30 Identities = 352/524 (67%), Gaps = 10/524 (2%) Strand=Plus/Plus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| ||| ||| ||| || || | || |||| || ||||| || | || || Sbjct 400063 GGCAAAGTCCGTGTGCAGGCCCTCGTCGCGGCAGATCAGCTCGTTCGAGAAGGTCAGTCC 400122 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGG-CACAGAAGGAACCACTGAAGAAGA 74868 |||||| || || |||||||| | ||| ||||| | | || || || || |||||||| Sbjct 400123 AGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATCGACGCA-AACGAGCCCGAGAAGAAGA 400181 Query 74869 TGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCG--GAAGTC-A 74925 |||| ||||| ||||||||| || ||||| ||||| || ||| | || | Sbjct 400182 TGCCCTCGACCGCCGCAAAGGCCACCAGGCGCACGCCGAACTTGGCCTCGCGGTTATCGA 400241 Query 74926 TCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGG 74984 |||| | ||||| || || || | | | ||| |||| | ||||| || ||| Sbjct 400242 TCCAGCGAAGCGCCCAGTCGGCCTT-CTTGCGGATGCACGGGATGTTGTCGATAGCGTGG 400300 Query 74985 AAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTC 75044 || | | ||| | ||| || || | | ||||||| | || ||||||||| Sbjct 400301 AACAAAAAGTCGCGCTCCTTGGGGTCGCGGATGTACGTGTCAATGAGCAGCGAGTACGTC 400360 Query 75045 TCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATC 75104 ||||| || || ||| | | | |||| | ||||||| ||||||||||| | ||| Sbjct 400361 TCCGAGTGGATGTTCTCAATCATCATCTGGAAGCCGTAGAACGACCGCGCCTCGGGGATC 400420 Query 75105 TGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCG 75164 || || || | ||| ||| | | ||||| ||||||||||||||||||| || Sbjct 400421 TGAACCTCGGTGCTAAAGTTCTGCACCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGCA 400480 Query 75165 AAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGT---GAGTTTGTCCCAA 75221 || || || || || ||||||||||| ||||| | ||| | | | |||||||| Sbjct 400481 AAGAACGCGAGCACGTACTTGATAAAGTGACGCTCGTTGTCGTTCAGGCGGTTGTCCCAG 400540 Query 75222 TCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 | || |||| || || || || |||||| |||||||||| Sbjct 400541 TGGCCCATGTCCTGCGACAGGTCGATTTCCTCGGCCGTCCAGAA 400584 >seq24 Length=729003 Score = 102 bits (112), Expect = 9e-17 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 118172 GCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCC 118231 ||||| || || ||| ||||||| || ||||| | || | |||||||||||||| ||| Sbjct 507051 GCGTCGCGCACATTGAGCGGCTTTCCGCGCAGCGTGAAAATCCCAAACTTGTCACGTCCC 506992 Query 118232 ACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGA 118291 ||||| || || || | ||| || ||||| || ||||| ||||| || | ||| || Sbjct 506991 TGAACGCCCAGTCCAGCCACAGCCAGCGCCTTGGCAGAGTCTCCCTCAGTCAGAATCAGC 506932 Query 118292 GTGCACTCGGTGCTGCGATGAGTACCGGCCCAATTAGCATCATCCAGCTTCGGAACGCCC 118351 |||||||| |||| || || ||| || || ||||| ||||| || |||| Sbjct 506931 GTGCACTCCTTGCTTTTGGCTGTGCCAGCCATGTTGGCGTCATCGAGCTTGTCAATGCCC 506872 Query 118352 GTAATGCGCGACTTTTTGGACCCATCTGTCTTCTTGAGCTC 118392 || || || | ||||| || ||||||||||| || Sbjct 506871 GTGATCCGGCTGGTGCGCGACCCGTCGGTCTTCTTGAGGTC 506831 >seq210 Length=39130 Score = 96.9 bits (106), Expect = 4e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 118172 GCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCC 118231 ||||| || || ||| ||||||| || ||||| | || | |||||||||||||| ||| Sbjct 29230 GCGTCGCGCACATTGAGCGGCTTTCCGCGCAGCGTGAAAATCCCAAACTTGTCACGTCCC 29171 Query 118232 ACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGA 118291 ||||| || || || | ||| || ||||| || || || ||||| || | ||| || Sbjct 29170 TGAACGCCCAGTCCAGCCACAGCCAGCGCCTTGGCAGAATCTCCCTCAGTCAGAATCAGC 29111 Query 118292 GTGCACTCGGTGCTGCGATGAGTACCGGCCCAATTAGCATCATCCAGCTTCGGAACGCCC 118351 |||||||| |||| || || ||| || || ||||| ||||| || |||| Sbjct 29110 GTGCACTCCTTGCTTTTGGCTGTGCCAGCCATGTTGGCGTCATCGAGCTTGTCAATGCCC 29051 Query 118352 GTAATGCGCGACTTTTTGGACCCATCTGTCTTCTTGAGCTC 118392 || || || | ||||| || ||||||||||| || Sbjct 29050 GTGATCCGGCTGGTGCGCGACCCGTCGGTCTTCTTGAGGTC 29010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214447274600